Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 SNORA63.7-201ENST00000365579 123 ntBASIC-1.16□□□□□ -2.6
CXCL3P19876 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.16□□□□□ -2.6
CXCL3P19876 Y_RNA.387-201ENST00000383918 102 ntBASIC-1.16□□□□□ -2.6
CXCL3P19876 SNORA32-201ENST00000384072 121 ntBASIC-1.16□□□□□ -2.6
CXCL3P19876 SNORD116-29-201ENST00000384516 83 ntBASIC-1.16□□□□□ -2.6
CXCL3P19876 RNU6-35P-201ENST00000384530 107 ntBASIC-1.16□□□□□ -2.6
CXCL3P19876 MIR617-201ENST00000385030 97 ntBASIC-1.16□□□□□ -2.6
CXCL3P19876 MT-TT-201ENST00000387460 66 ntBASIC-1.16□□□□□ -2.6
CXCL3P19876 SNORA79-201ENST00000408376 140 ntBASIC-1.16□□□□□ -2.6
CXCL3P19876 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-1.16□□□□□ -2.6
CXCL3P19876 RNU7-152P-201ENST00000458982 64 ntBASIC-1.16□□□□□ -2.6
CXCL3P19876 RNA5SP169-201ENST00000517268 117 ntBASIC-1.16□□□□□ -2.6
CXCL3P19876 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.16□□□□□ -2.6
CXCL3P19876 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.17□□□□□ -2.6
CXCL3P19876 Y_RNA.187-201ENST00000363918 113 ntBASIC-1.17□□□□□ -2.6
CXCL3P19876 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.17□□□□□ -2.6
CXCL3P19876 MIR519E-201ENST00000385075 84 ntBASIC-1.17□□□□□ -2.6
CXCL3P19876 MIR1265-201ENST00000408444 86 ntBASIC-1.17□□□□□ -2.6
CXCL3P19876 Y_RNA.718-201ENST00000517110 102 ntBASIC-1.17□□□□□ -2.6
CXCL3P19876 IGKV1-22-201ENST00000524313 326 ntBASIC-1.17□□□□□ -2.6
CXCL3P19876 MIR4500-201ENST00000579472 76 ntBASIC-1.17□□□□□ -2.6
CXCL3P19876 MIR3681-201ENST00000580089 72 ntBASIC-1.17□□□□□ -2.6
CXCL3P19876 AC080013.6-201ENST00000606185 215 ntBASIC-1.17□□□□□ -2.6
CXCL3P19876 AC104985.2-201ENST00000620598 500 ntBASIC-1.17□□□□□ -2.6
CXCL3P19876 MTND4LP32-201ENST00000636111 270 ntBASIC-1.17□□□□□ -2.6
CXCL3P19876 RNU6-211P-201ENST00000384047 107 ntBASIC-1.18□□□□□ -2.6
CXCL3P19876 RNU6-138P-201ENST00000515952 107 ntBASIC-1.18□□□□□ -2.6
CXCL3P19876 AP001328.1-201ENST00000528550 176 ntBASIC-1.18□□□□□ -2.6
CXCL3P19876 RNU6-623P-201ENST00000363143 105 ntBASIC-1.19□□□□□ -2.6
CXCL3P19876 Y_RNA.176-201ENST00000363815 109 ntBASIC-1.19□□□□□ -2.6
CXCL3P19876 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.19□□□□□ -2.6
CXCL3P19876 RNU6-154P-201ENST00000384306 106 ntBASIC-1.19□□□□□ -2.6
CXCL3P19876 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.19□□□□□ -2.6
CXCL3P19876 RNU4-43P-201ENST00000410628 137 ntBASIC-1.19□□□□□ -2.6
CXCL3P19876 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.19□□□□□ -2.6
CXCL3P19876 RNU6-1149P-201ENST00000516810 97 ntBASIC-1.19□□□□□ -2.6
CXCL3P19876 MIR20A-201ENST00000362279 71 ntBASIC-1.2□□□□□ -2.6
CXCL3P19876 RNU6-502P-201ENST00000362419 108 ntBASIC-1.2□□□□□ -2.6
CXCL3P19876 Y_RNA.160-201ENST00000363677 92 ntBASIC-1.2□□□□□ -2.6
CXCL3P19876 MIR624-201ENST00000385217 97 ntBASIC-1.2□□□□□ -2.6
CXCL3P19876 MIR1302-11-201ENST00000408051 138 ntBASIC-1.2□□□□□ -2.6
CXCL3P19876 MIR1302-9-201ENST00000408365 138 ntBASIC-1.2□□□□□ -2.6
CXCL3P19876 MIR1302-10-201ENST00000408734 138 ntBASIC-1.2□□□□□ -2.6
CXCL3P19876 SNORD63B-201ENST00000411005 70 ntBASIC-1.2□□□□□ -2.6
CXCL3P19876 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.2□□□□□ -2.6
CXCL3P19876 RNU7-195P-201ENST00000458793 62 ntBASIC-1.2□□□□□ -2.6
CXCL3P19876 Y_RNA.661-201ENST00000516003 99 ntBASIC-1.2□□□□□ -2.6
CXCL3P19876 MIR4460-201ENST00000577862 86 ntBASIC-1.2□□□□□ -2.6
CXCL3P19876 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-1.2□□□□□ -2.6
CXCL3P19876 MIR548AG2-201ENST00000581228 64 ntBASIC-1.2□□□□□ -2.6
CXCL3P19876 MIR4280-201ENST00000582178 76 ntBASIC-1.2□□□□□ -2.6
CXCL3P19876 MIR548AE2-201ENST00000583456 67 ntBASIC-1.2□□□□□ -2.6
CXCL3P19876 AC006504.6-201ENST00000590142 199 ntBASIC-1.2□□□□□ -2.6
CXCL3P19876 MIR1302-2-201ENST00000607096 138 ntBASIC-1.2□□□□□ -2.6
CXCL3P19876 AC084782.3-201ENST00000612282 578 ntBASIC-1.2□□□□□ -2.6
CXCL3P19876 AC112487.2-201ENST00000637950 304 ntBASIC-1.2□□□□□ -2.6
CXCL3P19876 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.21□□□□□ -2.6
CXCL3P19876 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.21□□□□□ -2.6
CXCL3P19876 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.21□□□□□ -2.6
CXCL3P19876 RNU6-524P-201ENST00000384270 107 ntBASIC-1.21□□□□□ -2.6
CXCL3P19876 Y_RNA.485-201ENST00000384395 102 ntBASIC-1.21□□□□□ -2.6
CXCL3P19876 RNU6-901P-201ENST00000384593 106 ntBASIC-1.21□□□□□ -2.6
CXCL3P19876 RNU7-48P-201ENST00000458875 63 ntBASIC-1.21□□□□□ -2.6
CXCL3P19876 AC082651.2-201ENST00000496833 166 ntBASIC-1.21□□□□□ -2.6
CXCL3P19876 RNU6-976P-201ENST00000516086 111 ntBASIC-1.21□□□□□ -2.6
CXCL3P19876 RNU6-881P-201ENST00000516813 102 ntBASIC-1.21□□□□□ -2.6
CXCL3P19876 MIR548AE1-201ENST00000583292 70 ntBASIC-1.21□□□□□ -2.6
CXCL3P19876 MIR6851-201ENST00000617060 67 ntBASIC-1.21□□□□□ -2.6
CXCL3P19876 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.22□□□□□ -2.6
CXCL3P19876 RNU6-170P-201ENST00000362832 104 ntBASIC-1.22□□□□□ -2.6
CXCL3P19876 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.22□□□□□ -2.6
CXCL3P19876 snoU2_19.4-201ENST00000364329 80 ntBASIC-1.22□□□□□ -2.6
CXCL3P19876 RNU6-728P-201ENST00000365375 104 ntBASIC-1.22□□□□□ -2.6
CXCL3P19876 RNU6-1215P-201ENST00000384441 102 ntBASIC-1.22□□□□□ -2.6
CXCL3P19876 Y_RNA.541-201ENST00000384640 113 ntBASIC-1.22□□□□□ -2.6
CXCL3P19876 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.22□□□□□ -2.6
CXCL3P19876 SNORD116-25-201ENST00000516517 92 ntBASIC-1.22□□□□□ -2.6
CXCL3P19876 AC090574.1-201ENST00000623186 233 ntBASIC-1.22□□□□□ -2.6
CXCL3P19876 Y_RNA.5-201ENST00000362334 102 ntBASIC-1.23□□□□□ -2.61
CXCL3P19876 RNU4-36P-201ENST00000364294 144 ntBASIC-1.23□□□□□ -2.61
CXCL3P19876 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.23□□□□□ -2.61
CXCL3P19876 SNORD56B-201ENST00000384713 71 ntBASIC-1.23□□□□□ -2.61
CXCL3P19876 AL445193.1-201ENST00000441183 141 ntBASIC-1.23□□□□□ -2.61
CXCL3P19876 AC244090.1-201ENST00000441884 93 ntBASIC-1.23□□□□□ -2.61
CXCL3P19876 RNU6-453P-201ENST00000516819 85 ntBASIC-1.23□□□□□ -2.61
CXCL3P19876 Y_RNA.154-201ENST00000363624 102 ntBASIC-1.24□□□□□ -2.61
CXCL3P19876 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.24□□□□□ -2.61
CXCL3P19876 Y_RNA.384-201ENST00000383909 102 ntBASIC-1.24□□□□□ -2.61
CXCL3P19876 MT-TY-201ENST00000387409 66 ntBASIC-1.24□□□□□ -2.61
CXCL3P19876 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.24□□□□□ -2.61
CXCL3P19876 MIR548AX-201ENST00000580117 73 ntBASIC-1.24□□□□□ -2.61
CXCL3P19876 AC011603.4-201ENST00000611325 277 ntBASIC-1.24□□□□□ -2.61
CXCL3P19876 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.24□□□□□ -2.61
CXCL3P19876 AP001362.1-201ENST00000625165 124 ntBASIC-1.24□□□□□ -2.61
CXCL3P19876 RNU6-978P-201ENST00000364371 103 ntBASIC-1.25□□□□□ -2.61
CXCL3P19876 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.25□□□□□ -2.61
CXCL3P19876 MIR196A1-201ENST00000388006 70 ntBASIC-1.25□□□□□ -2.61
CXCL3P19876 MTATP6P23-201ENST00000440153 476 ntBASIC-1.25□□□□□ -2.61
CXCL3P19876 Z83846.1-201ENST00000446798 265 ntBASIC-1.25□□□□□ -2.61
CXCL3P19876 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.25□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 187 ms