Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.24□□□□□ -2.05
NFKB1P19838 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
NFKB1P19838 Y_RNA.119-201ENST00000363301 96 ntBASIC2.23□□□□□ -2.05
NFKB1P19838 RNU4-53P-201ENST00000410828 140 ntBASIC2.23□□□□□ -2.05
NFKB1P19838 Y_RNA.648-201ENST00000459455 110 ntBASIC2.23□□□□□ -2.05
NFKB1P19838 AC104435.1-201ENST00000483483 166 ntBASIC2.23□□□□□ -2.05
NFKB1P19838 RNU7-153P-201ENST00000516455 62 ntBASIC2.23□□□□□ -2.05
NFKB1P19838 MIR2115-201ENST00000516657 100 ntBASIC2.23□□□□□ -2.05
NFKB1P19838 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.23□□□□□ -2.05
NFKB1P19838 GHRLOS.1-201ENST00000610995 70 ntBASIC2.23□□□□□ -2.05
NFKB1P19838 RNU6-315P-201ENST00000362666 107 ntBASIC2.22□□□□□ -2.05
NFKB1P19838 RNU7-85P-201ENST00000458851 63 ntBASIC2.22□□□□□ -2.05
NFKB1P19838 snoU13.25-201ENST00000458945 104 ntBASIC2.22□□□□□ -2.05
NFKB1P19838 SNORA77B-201ENST00000578179 125 ntBASIC2.22□□□□□ -2.05
NFKB1P19838 MIR4524B-201ENST00000581569 115 ntBASIC2.22□□□□□ -2.05
NFKB1P19838 RNU4-32P-201ENST00000363404 141 ntBASIC2.21□□□□□ -2.06
NFKB1P19838 MT-TF-201ENST00000387314 71 ntBASIC2.21□□□□□ -2.06
NFKB1P19838 BX276092.1-201ENST00000427368 251 ntBASIC2.21□□□□□ -2.06
NFKB1P19838 RNU7-62P-201ENST00000458856 62 ntBASIC2.21□□□□□ -2.06
NFKB1P19838 RN7SL274P-201ENST00000492268 272 ntBASIC2.21□□□□□ -2.06
NFKB1P19838 RNA5SP200-201ENST00000516360 103 ntBASIC2.21□□□□□ -2.06
NFKB1P19838 SNORA25.13-201ENST00000516395 103 ntBASIC2.21□□□□□ -2.06
NFKB1P19838 AP003716.2-201ENST00000528260 108 ntBASIC2.21□□□□□ -2.06
NFKB1P19838 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
NFKB1P19838 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
NFKB1P19838 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
NFKB1P19838 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
NFKB1P19838 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
NFKB1P19838 RNU6-205P-201ENST00000390858 107 ntBASIC2.2□□□□□ -2.06
NFKB1P19838 RNU6-129P-201ENST00000391022 107 ntBASIC2.2□□□□□ -2.06
NFKB1P19838 MIR889-201ENST00000401280 79 ntBASIC2.2□□□□□ -2.06
NFKB1P19838 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.2□□□□□ -2.06
NFKB1P19838 MIR6132-201ENST00000622083 109 ntBASIC2.2□□□□□ -2.06
NFKB1P19838 MIR377-201ENST00000362145 69 ntBASIC2.19□□□□□ -2.06
NFKB1P19838 AC244636.1-201ENST00000421152 228 ntBASIC2.19□□□□□ -2.06
NFKB1P19838 RPL30P7-201ENST00000479312 323 ntBASIC2.19□□□□□ -2.06
NFKB1P19838 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
NFKB1P19838 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
NFKB1P19838 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
NFKB1P19838 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
NFKB1P19838 U8.2-201ENST00000363156 134 ntBASIC2.18□□□□□ -2.06
NFKB1P19838 SNORA70B-201ENST00000384210 135 ntBASIC2.18□□□□□ -2.06
NFKB1P19838 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
NFKB1P19838 RNU6-237P-201ENST00000515985 71 ntBASIC2.18□□□□□ -2.06
NFKB1P19838 RNU11-2P-201ENST00000516898 142 ntBASIC2.18□□□□□ -2.06
NFKB1P19838 MIR5002-201ENST00000584713 97 ntBASIC2.18□□□□□ -2.06
NFKB1P19838 AC145423.2-201ENST00000610631 239 ntBASIC2.18□□□□□ -2.06
NFKB1P19838 uc_338.6-201ENST00000613544 171 ntBASIC2.18□□□□□ -2.06
NFKB1P19838 AL773524.1-201ENST00000614065 229 ntBASIC2.18□□□□□ -2.06
NFKB1P19838 MIR6516-201ENST00000630554 81 ntBASIC2.18□□□□□ -2.06
NFKB1P19838 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.17□□□□□ -2.06
NFKB1P19838 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
NFKB1P19838 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
NFKB1P19838 AL596028.1-201ENST00000326971 197 ntBASIC2.17□□□□□ -2.06
NFKB1P19838 RNU6-624P-201ENST00000363411 107 ntBASIC2.17□□□□□ -2.06
NFKB1P19838 RNU6-478P-201ENST00000363904 110 ntBASIC2.17□□□□□ -2.06
NFKB1P19838 RNU6-1229P-201ENST00000364295 107 ntBASIC2.17□□□□□ -2.06
NFKB1P19838 RNA5SP37-201ENST00000365420 130 ntBASIC2.17□□□□□ -2.06
NFKB1P19838 SNORA72.6-201ENST00000384520 129 ntBASIC2.17□□□□□ -2.06
NFKB1P19838 SNORA48.3-201ENST00000391081 134 ntBASIC2.17□□□□□ -2.06
NFKB1P19838 AC245517.4-201ENST00000448601 281 ntBASIC2.17□□□□□ -2.06
NFKB1P19838 snoU13.26-201ENST00000459452 105 ntBASIC2.17□□□□□ -2.06
NFKB1P19838 AC005908.1-201ENST00000468701 347 ntBASIC2.17□□□□□ -2.06
NFKB1P19838 MIR6873-201ENST00000622788 63 ntBASIC2.17□□□□□ -2.06
NFKB1P19838 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
NFKB1P19838 AC131280.1-202ENST00000624067 4211 ntBASIC2.17□□□□□ -2.06
NFKB1P19838 SNORA16B-201ENST00000364674 135 ntBASIC2.16□□□□□ -2.06
NFKB1P19838 MIR1185-1-201ENST00000408598 86 ntBASIC2.16□□□□□ -2.06
NFKB1P19838 AL133373.1-201ENST00000497098 94 ntBASIC2.16□□□□□ -2.06
NFKB1P19838 SNORD53-201ENST00000579969 78 ntBASIC2.16□□□□□ -2.06
NFKB1P19838 MIR4713-201ENST00000582691 75 ntBASIC2.16□□□□□ -2.06
NFKB1P19838 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.16□□□□□ -2.06
NFKB1P19838 MIR8074-201ENST00000615081 81 ntBASIC2.16□□□□□ -2.06
NFKB1P19838 Y_RNA.508-201ENST00000384502 114 ntBASIC2.15□□□□□ -2.07
NFKB1P19838 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.15□□□□□ -2.07
NFKB1P19838 snoU13.11-201ENST00000459219 104 ntBASIC2.15□□□□□ -2.07
NFKB1P19838 RNU6-947P-201ENST00000516264 106 ntBASIC2.15□□□□□ -2.07
NFKB1P19838 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.15□□□□□ -2.07
NFKB1P19838 SNORD36A-201ENST00000362874 73 ntBASIC2.14□□□□□ -2.07
NFKB1P19838 MIR504-201ENST00000385065 83 ntBASIC2.14□□□□□ -2.07
NFKB1P19838 AL450471.1-201ENST00000447509 127 ntBASIC2.14□□□□□ -2.07
NFKB1P19838 AC139453.2-201ENST00000487255 133 ntBASIC2.14□□□□□ -2.07
NFKB1P19838 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
NFKB1P19838 MIR103A2-201ENST00000362154 78 ntBASIC2.13□□□□□ -2.07
NFKB1P19838 MIR516A2-201ENST00000384888 90 ntBASIC2.13□□□□□ -2.07
NFKB1P19838 MIR516A1-201ENST00000385033 90 ntBASIC2.13□□□□□ -2.07
NFKB1P19838 RNU6-1254P-201ENST00000391266 104 ntBASIC2.13□□□□□ -2.07
NFKB1P19838 Z98742.3-201ENST00000418637 326 ntBASIC2.13□□□□□ -2.07
NFKB1P19838 AC023790.1-201ENST00000482174 347 ntBASIC2.13□□□□□ -2.07
NFKB1P19838 AC090255.1-201ENST00000495779 349 ntBASIC2.13□□□□□ -2.07
NFKB1P19838 RNU6-557P-201ENST00000516842 110 ntBASIC2.13□□□□□ -2.07
NFKB1P19838 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.13□□□□□ -2.07
NFKB1P19838 MIR4796-201ENST00000580742 81 ntBASIC2.13□□□□□ -2.07
NFKB1P19838 RNA5SP264-201ENST00000363115 107 ntBASIC2.12□□□□□ -2.07
NFKB1P19838 RNU6-654P-201ENST00000364373 107 ntBASIC2.12□□□□□ -2.07
NFKB1P19838 RNU6-580P-201ENST00000365159 107 ntBASIC2.12□□□□□ -2.07
NFKB1P19838 RNU6-811P-201ENST00000384069 107 ntBASIC2.12□□□□□ -2.07
NFKB1P19838 Y_RNA.588-201ENST00000391254 102 ntBASIC2.12□□□□□ -2.07
NFKB1P19838 SNORA3.2-201ENST00000408221 125 ntBASIC2.12□□□□□ -2.07
NFKB1P19838 AL356320.1-201ENST00000429616 163 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms