Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 MIR760-201ENST00000390220 80 ntBASIC0.02□□□□□ -2.41
HMGB1P09429 MIR6718-201ENST00000616153 80 ntBASIC0.02□□□□□ -2.41
HMGB1P09429 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.02□□□□□ -2.41
HMGB1P09429 Y_RNA.20-201ENST00000362479 113 ntBASIC0.01□□□□□ -2.41
HMGB1P09429 Y_RNA.120-201ENST00000363304 110 ntBASIC0.01□□□□□ -2.41
HMGB1P09429 RNU6-716P-201ENST00000365621 103 ntBASIC0.01□□□□□ -2.41
HMGB1P09429 MIR4514-201ENST00000581410 57 ntBASIC0.01□□□□□ -2.41
HMGB1P09429 AC104408.1-201ENST00000605241 170 ntBASIC0.01□□□□□ -2.41
HMGB1P09429 RNU4-67P-201ENST00000364569 141 ntBASIC0□□□□□ -2.41
HMGB1P09429 Y_RNA.350-201ENST00000365409 98 ntBASIC0□□□□□ -2.41
HMGB1P09429 Y_RNA.393-201ENST00000383936 102 ntBASIC0□□□□□ -2.41
HMGB1P09429 RN7SL793P-201ENST00000583259 296 ntBASIC0□□□□□ -2.41
HMGB1P09429 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.01□□□□□ -2.41
HMGB1P09429 SNORD114-9-201ENST00000364370 72 ntBASIC-0.01□□□□□ -2.41
HMGB1P09429 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.01□□□□□ -2.41
HMGB1P09429 MTCYBP9-201ENST00000431021 303 ntBASIC-0.01□□□□□ -2.41
HMGB1P09429 SNORD67.1-201ENST00000516618 108 ntBASIC-0.01□□□□□ -2.41
HMGB1P09429 MIR3128-201ENST00000581957 66 ntBASIC-0.01□□□□□ -2.41
HMGB1P09429 MIR548AE2-201ENST00000583456 67 ntBASIC-0.01□□□□□ -2.41
HMGB1P09429 MIR411-201ENST00000362239 96 ntBASIC-0.02□□□□□ -2.41
HMGB1P09429 SNORA42.1-201ENST00000363515 137 ntBASIC-0.02□□□□□ -2.41
HMGB1P09429 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.02□□□□□ -2.41
HMGB1P09429 RNU6-768P-201ENST00000384683 107 ntBASIC-0.02□□□□□ -2.41
HMGB1P09429 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
HMGB1P09429 MIR548L-201ENST00000408303 86 ntBASIC-0.02□□□□□ -2.41
HMGB1P09429 RNU4-71P-201ENST00000516258 113 ntBASIC-0.02□□□□□ -2.41
HMGB1P09429 MIR4752-201ENST00000579672 72 ntBASIC-0.02□□□□□ -2.41
HMGB1P09429 MIR4305-201ENST00000583252 102 ntBASIC-0.02□□□□□ -2.41
HMGB1P09429 AC105081.1-201ENST00000617727 106 ntBASIC-0.02□□□□□ -2.41
HMGB1P09429 SNORD115-2-201ENST00000362842 82 ntBASIC-0.03□□□□□ -2.41
HMGB1P09429 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.03□□□□□ -2.41
HMGB1P09429 SNORD115-20-201ENST00000365099 82 ntBASIC-0.03□□□□□ -2.41
HMGB1P09429 RNU7-137P-201ENST00000516788 62 ntBASIC-0.03□□□□□ -2.41
HMGB1P09429 AC138749.4-201ENST00000563970 127 ntBASIC-0.03□□□□□ -2.41
HMGB1P09429 MIR4768-201ENST00000585270 74 ntBASIC-0.03□□□□□ -2.41
HMGB1P09429 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.03□□□□□ -2.41
HMGB1P09429 SNORD115-24-201ENST00000363528 82 ntBASIC-0.04□□□□□ -2.42
HMGB1P09429 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.04□□□□□ -2.42
HMGB1P09429 RNU6-818P-201ENST00000364837 108 ntBASIC-0.04□□□□□ -2.42
HMGB1P09429 MIR643-201ENST00000385267 97 ntBASIC-0.04□□□□□ -2.42
HMGB1P09429 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.05□□□□□ -2.42
HMGB1P09429 MIR610-201ENST00000385139 96 ntBASIC-0.05□□□□□ -2.42
HMGB1P09429 SNORD58.1-201ENST00000391313 66 ntBASIC-0.05□□□□□ -2.42
HMGB1P09429 RNA5SP236-201ENST00000516169 116 ntBASIC-0.05□□□□□ -2.42
HMGB1P09429 RNU6-327P-201ENST00000516270 127 ntBASIC-0.05□□□□□ -2.42
HMGB1P09429 SNORA62.5-201ENST00000516634 120 ntBASIC-0.05□□□□□ -2.42
HMGB1P09429 MIR4667-201ENST00000578933 66 ntBASIC-0.05□□□□□ -2.42
HMGB1P09429 SNORD114-5-201ENST00000362928 70 ntBASIC-0.06□□□□□ -2.42
HMGB1P09429 SNORA2A-201ENST00000383885 135 ntBASIC-0.06□□□□□ -2.42
HMGB1P09429 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.06□□□□□ -2.42
HMGB1P09429 AC062037.2-201ENST00000610137 73 ntBASIC-0.06□□□□□ -2.42
HMGB1P09429 SNORD114-16-201ENST00000363044 70 ntBASIC-0.07□□□□□ -2.42
HMGB1P09429 MIR568-201ENST00000385036 95 ntBASIC-0.07□□□□□ -2.42
HMGB1P09429 RNU6-127P-201ENST00000390897 107 ntBASIC-0.07□□□□□ -2.42
HMGB1P09429 AC107027.2-201ENST00000512197 115 ntBASIC-0.07□□□□□ -2.42
HMGB1P09429 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.07□□□□□ -2.42
HMGB1P09429 RNU6-240P-201ENST00000516098 97 ntBASIC-0.07□□□□□ -2.42
HMGB1P09429 AC098479.1-201ENST00000609225 154 ntBASIC-0.07□□□□□ -2.42
HMGB1P09429 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.08□□□□□ -2.42
HMGB1P09429 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.08□□□□□ -2.42
HMGB1P09429 SNORA20.1-201ENST00000364790 130 ntBASIC-0.08□□□□□ -2.42
HMGB1P09429 RNA5SP128-201ENST00000365305 116 ntBASIC-0.08□□□□□ -2.42
HMGB1P09429 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.08□□□□□ -2.42
HMGB1P09429 RNU6-918P-201ENST00000391219 106 ntBASIC-0.08□□□□□ -2.42
HMGB1P09429 MTATP6P21-201ENST00000440681 189 ntBASIC-0.08□□□□□ -2.42
HMGB1P09429 AL118496.2-201ENST00000448300 230 ntBASIC-0.08□□□□□ -2.42
HMGB1P09429 RNU2-35P-201ENST00000516446 142 ntBASIC-0.08□□□□□ -2.42
HMGB1P09429 AC138907.4-201ENST00000570107 226 ntBASIC-0.08□□□□□ -2.42
HMGB1P09429 AL359881.1-201ENST00000602916 267 ntBASIC-0.08□□□□□ -2.42
HMGB1P09429 AC021443.1-201ENST00000604478 211 ntBASIC-0.08□□□□□ -2.42
HMGB1P09429 SNORD114-10-201ENST00000363409 72 ntBASIC-0.09□□□□□ -2.42
HMGB1P09429 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.09□□□□□ -2.42
HMGB1P09429 RNA5SP325-201ENST00000363756 130 ntBASIC-0.09□□□□□ -2.42
HMGB1P09429 RNU6-848P-201ENST00000515948 107 ntBASIC-0.09□□□□□ -2.42
HMGB1P09429 RNU6-617P-201ENST00000516147 107 ntBASIC-0.09□□□□□ -2.42
HMGB1P09429 RNU6-473P-201ENST00000516164 107 ntBASIC-0.09□□□□□ -2.42
HMGB1P09429 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.09□□□□□ -2.42
HMGB1P09429 RNU6-111P-201ENST00000517179 105 ntBASIC-0.09□□□□□ -2.42
HMGB1P09429 MIR499B-201ENST00000636498 73 ntBASIC-0.09□□□□□ -2.42
HMGB1P09429 RNU6-702P-201ENST00000364982 107 ntBASIC-0.1□□□□□ -2.43
HMGB1P09429 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.1□□□□□ -2.43
HMGB1P09429 RNY1P4-201ENST00000384595 115 ntBASIC-0.1□□□□□ -2.43
HMGB1P09429 RPL39P34-201ENST00000477141 156 ntBASIC-0.1□□□□□ -2.43
HMGB1P09429 AC011603.4-201ENST00000611325 277 ntBASIC-0.1□□□□□ -2.43
HMGB1P09429 MIR330-201ENST00000362196 94 ntBASIC-0.11□□□□□ -2.43
HMGB1P09429 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.11□□□□□ -2.43
HMGB1P09429 MIR193B-201ENST00000384907 83 ntBASIC-0.11□□□□□ -2.43
HMGB1P09429 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
HMGB1P09429 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.11□□□□□ -2.43
HMGB1P09429 AC138869.1-201ENST00000568623 124 ntBASIC-0.11□□□□□ -2.43
HMGB1P09429 MIR6844-201ENST00000637122 62 ntBASIC-0.11□□□□□ -2.43
HMGB1P09429 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.12□□□□□ -2.43
HMGB1P09429 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.12□□□□□ -2.43
HMGB1P09429 RNU7-164P-201ENST00000459221 62 ntBASIC-0.12□□□□□ -2.43
HMGB1P09429 MIR548H5-201ENST00000580314 60 ntBASIC-0.12□□□□□ -2.43
HMGB1P09429 MIR371B-201ENST00000638082 66 ntBASIC-0.12□□□□□ -2.43
HMGB1P09429 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.13□□□□□ -2.43
HMGB1P09429 RNU6-1020P-201ENST00000363684 107 ntBASIC-0.13□□□□□ -2.43
HMGB1P09429 SNORA75.5-201ENST00000391291 81 ntBASIC-0.13□□□□□ -2.43
HMGB1P09429 RNY1P2-201ENST00000364820 117 ntBASIC-0.14□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 187.2 ms