Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 RNY1P10-201ENST00000363268 113 ntBASIC1.88□□□□□ -2.11
SYPP08247 Y_RNA.190-201ENST00000363964 101 ntBASIC1.88□□□□□ -2.11
SYPP08247 RNU6-396P-201ENST00000365369 105 ntBASIC1.88□□□□□ -2.11
SYPP08247 RNU6-949P-201ENST00000384040 107 ntBASIC1.88□□□□□ -2.11
SYPP08247 MIR588-201ENST00000384900 83 ntBASIC1.88□□□□□ -2.11
SYPP08247 MIR563-201ENST00000385080 79 ntBASIC1.88□□□□□ -2.11
SYPP08247 U8.15-201ENST00000390947 134 ntBASIC1.88□□□□□ -2.11
SYPP08247 AC005908.1-201ENST00000468701 347 ntBASIC1.88□□□□□ -2.11
SYPP08247 RNA5SP364-201ENST00000516938 78 ntBASIC1.88□□□□□ -2.11
SYPP08247 MIR494-201ENST00000349529 81 ntBASIC1.87□□□□□ -2.11
SYPP08247 MIR548G-201ENST00000408442 89 ntBASIC1.87□□□□□ -2.11
SYPP08247 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.87□□□□□ -2.11
SYPP08247 AC027119.1-201ENST00000440877 241 ntBASIC1.87□□□□□ -2.11
SYPP08247 RPL39P39-201ENST00000455840 151 ntBASIC1.87□□□□□ -2.11
SYPP08247 RNU6-947P-201ENST00000516264 106 ntBASIC1.87□□□□□ -2.11
SYPP08247 MIR5089-201ENST00000580047 84 ntBASIC1.87□□□□□ -2.11
SYPP08247 MIR4264-201ENST00000583520 66 ntBASIC1.87□□□□□ -2.11
SYPP08247 RNU6-86P-201ENST00000606534 107 ntBASIC1.87□□□□□ -2.11
SYPP08247 AL627230.6-201ENST00000611129 280 ntBASIC1.87□□□□□ -2.11
SYPP08247 MIR6740-201ENST00000618268 113 ntBASIC1.87□□□□□ -2.11
SYPP08247 AP001362.1-201ENST00000625165 124 ntBASIC1.87□□□□□ -2.11
SYPP08247 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
SYPP08247 RNA5SP173-201ENST00000364857 136 ntBASIC1.86□□□□□ -2.11
SYPP08247 RNU6-1152P-201ENST00000384576 107 ntBASIC1.86□□□□□ -2.11
SYPP08247 MT-TN-201ENST00000387400 73 ntBASIC1.86□□□□□ -2.11
SYPP08247 snoU13.9-201ENST00000458927 103 ntBASIC1.86□□□□□ -2.11
SYPP08247 RN7SL274P-201ENST00000492268 272 ntBASIC1.86□□□□□ -2.11
SYPP08247 AL133373.1-201ENST00000497098 94 ntBASIC1.86□□□□□ -2.11
SYPP08247 MIR2115-201ENST00000516657 100 ntBASIC1.86□□□□□ -2.11
SYPP08247 AL096840.1-201ENST00000603287 93 ntBASIC1.86□□□□□ -2.11
SYPP08247 AC103810.7-201ENST00000607821 91 ntBASIC1.86□□□□□ -2.11
SYPP08247 AC084768.2-201ENST00000622736 221 ntBASIC1.86□□□□□ -2.11
SYPP08247 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.86□□□□□ -2.11
SYPP08247 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SYPP08247 RNU6-1244P-201ENST00000363614 108 ntBASIC1.85□□□□□ -2.11
SYPP08247 SNORD1A-201ENST00000364968 72 ntBASIC1.85□□□□□ -2.11
SYPP08247 SNORD58A-201ENST00000383875 65 ntBASIC1.85□□□□□ -2.11
SYPP08247 MIR30A-201ENST00000385092 71 ntBASIC1.85□□□□□ -2.11
SYPP08247 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
SYPP08247 SNORA67.5-201ENST00000391036 107 ntBASIC1.85□□□□□ -2.11
SYPP08247 SNORA17.3-201ENST00000391159 129 ntBASIC1.85□□□□□ -2.11
SYPP08247 MIR1185-1-201ENST00000408598 86 ntBASIC1.85□□□□□ -2.11
SYPP08247 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.85□□□□□ -2.11
SYPP08247 SNORD13-201ENST00000459299 104 ntBASIC1.85□□□□□ -2.11
SYPP08247 RNU6-90P-201ENST00000606352 106 ntBASIC1.85□□□□□ -2.11
SYPP08247 MIR6516-201ENST00000630554 81 ntBASIC1.85□□□□□ -2.11
SYPP08247 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.85□□□□□ -2.11
SYPP08247 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
SYPP08247 SNORD116-10-201ENST00000363791 102 ntBASIC1.84□□□□□ -2.11
SYPP08247 SNORD38.2-201ENST00000384470 69 ntBASIC1.84□□□□□ -2.11
SYPP08247 Y_RNA.567-201ENST00000384736 106 ntBASIC1.84□□□□□ -2.11
SYPP08247 RNU6-592P-201ENST00000411333 103 ntBASIC1.84□□□□□ -2.11
SYPP08247 SPINT5P-201ENST00000448174 155 ntBASIC1.84□□□□□ -2.11
SYPP08247 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.84□□□□□ -2.11
SYPP08247 AC133485.1-201ENST00000567176 124 ntBASIC1.84□□□□□ -2.11
SYPP08247 SNRPGP19-201ENST00000603826 189 ntBASIC1.84□□□□□ -2.11
SYPP08247 AP000753.3-201ENST00000604083 169 ntBASIC1.84□□□□□ -2.11
SYPP08247 uc_338.20-201ENST00000621563 178 ntBASIC1.84□□□□□ -2.11
SYPP08247 MIR30D-201ENST00000362283 70 ntBASIC1.83□□□□□ -2.12
SYPP08247 Y_RNA.173-201ENST00000363776 113 ntBASIC1.83□□□□□ -2.12
SYPP08247 RNY1P2-201ENST00000364820 117 ntBASIC1.83□□□□□ -2.12
SYPP08247 RNU6-675P-201ENST00000384236 104 ntBASIC1.83□□□□□ -2.12
SYPP08247 RNU6-205P-201ENST00000390858 107 ntBASIC1.83□□□□□ -2.12
SYPP08247 RNU6-321P-201ENST00000410912 106 ntBASIC1.83□□□□□ -2.12
SYPP08247 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.83□□□□□ -2.12
SYPP08247 RNU11-2P-201ENST00000516898 142 ntBASIC1.83□□□□□ -2.12
SYPP08247 SNORA44.1-201ENST00000517031 108 ntBASIC1.83□□□□□ -2.12
SYPP08247 MIR502-201ENST00000606349 86 ntBASIC1.83□□□□□ -2.12
SYPP08247 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SYPP08247 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.82□□□□□ -2.12
SYPP08247 RNA5SP264-201ENST00000363115 107 ntBASIC1.82□□□□□ -2.12
SYPP08247 RNU6-1165P-201ENST00000410119 107 ntBASIC1.82□□□□□ -2.12
SYPP08247 AC003989.2-201ENST00000440224 169 ntBASIC1.82□□□□□ -2.12
SYPP08247 AC079140.2-201ENST00000506193 142 ntBASIC1.82□□□□□ -2.12
SYPP08247 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.82□□□□□ -2.12
SYPP08247 AC019176.1-201ENST00000518519 225 ntBASIC1.82□□□□□ -2.12
SYPP08247 AC024614.2-201ENST00000577584 372 ntBASIC1.82□□□□□ -2.12
SYPP08247 SNORA4-201ENST00000584302 138 ntBASIC1.82□□□□□ -2.12
SYPP08247 AC012676.2-201ENST00000619258 186 ntBASIC1.82□□□□□ -2.12
SYPP08247 HSBP1P2-201ENST00000299671 229 ntBASIC1.81□□□□□ -2.12
SYPP08247 MIR377-201ENST00000362145 69 ntBASIC1.81□□□□□ -2.12
SYPP08247 MIR103A2-201ENST00000362154 78 ntBASIC1.81□□□□□ -2.12
SYPP08247 SNORD33-201ENST00000362761 85 ntBASIC1.81□□□□□ -2.12
SYPP08247 Y_RNA.168-201ENST00000363740 102 ntBASIC1.81□□□□□ -2.12
SYPP08247 RNU6-573P-201ENST00000383938 106 ntBASIC1.81□□□□□ -2.12
SYPP08247 SNORD116-22-201ENST00000384430 92 ntBASIC1.81□□□□□ -2.12
SYPP08247 MIR676-201ENST00000390702 67 ntBASIC1.81□□□□□ -2.12
SYPP08247 RNU6-613P-201ENST00000410412 108 ntBASIC1.81□□□□□ -2.12
SYPP08247 RNU7-62P-201ENST00000458856 62 ntBASIC1.81□□□□□ -2.12
SYPP08247 TRMT112P2-201ENST00000512910 132 ntBASIC1.81□□□□□ -2.12
SYPP08247 AL359821.1-201ENST00000605519 182 ntBASIC1.81□□□□□ -2.12
SYPP08247 RNY1P1-201ENST00000364372 112 ntBASIC1.8□□□□□ -2.12
SYPP08247 RNU6-402P-201ENST00000410678 103 ntBASIC1.8□□□□□ -2.12
SYPP08247 RNU1-98P-201ENST00000458992 160 ntBASIC1.8□□□□□ -2.12
SYPP08247 RPL30P7-201ENST00000479312 323 ntBASIC1.8□□□□□ -2.12
SYPP08247 RPS29P11-201ENST00000496507 171 ntBASIC1.8□□□□□ -2.12
SYPP08247 MTND5P40-201ENST00000559945 246 ntBASIC1.8□□□□□ -2.12
SYPP08247 AC138749.4-201ENST00000563970 127 ntBASIC1.8□□□□□ -2.12
SYPP08247 MIR3664-201ENST00000579074 99 ntBASIC1.8□□□□□ -2.12
SYPP08247 uc_338.6-201ENST00000613544 171 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 281.9 ms