Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 MIR101-2-201ENST00000362195 79 ntBASIC-0.03□□□□□ -2.41
CD74P04233 MIR411-201ENST00000362239 96 ntBASIC-0.03□□□□□ -2.41
CD74P04233 SNORA42.1-201ENST00000363515 137 ntBASIC-0.03□□□□□ -2.41
CD74P04233 SNORD27-201ENST00000363981 72 ntBASIC-0.03□□□□□ -2.41
CD74P04233 SNORA25.7-201ENST00000364375 127 ntBASIC-0.03□□□□□ -2.41
CD74P04233 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.03□□□□□ -2.41
CD74P04233 MIR329-2-201ENST00000385029 84 ntBASIC-0.03□□□□□ -2.41
CD74P04233 RNU6-127P-201ENST00000390897 107 ntBASIC-0.03□□□□□ -2.41
CD74P04233 RNA5SP144-201ENST00000410846 116 ntBASIC-0.03□□□□□ -2.41
CD74P04233 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.03□□□□□ -2.41
CD74P04233 AC006504.6-201ENST00000590142 199 ntBASIC-0.03□□□□□ -2.41
CD74P04233 MIR499B-201ENST00000636498 73 ntBASIC-0.03□□□□□ -2.41
CD74P04233 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.04□□□□□ -2.42
CD74P04233 RNU4-58P-201ENST00000363192 141 ntBASIC-0.04□□□□□ -2.42
CD74P04233 SNORA2A-201ENST00000383885 135 ntBASIC-0.04□□□□□ -2.42
CD74P04233 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.04□□□□□ -2.42
CD74P04233 MIR548H2-201ENST00000408874 88 ntBASIC-0.04□□□□□ -2.42
CD74P04233 AL022718.1-201ENST00000412004 84 ntBASIC-0.04□□□□□ -2.42
CD74P04233 RNA5SP285-201ENST00000516619 119 ntBASIC-0.04□□□□□ -2.42
CD74P04233 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.04□□□□□ -2.42
CD74P04233 AC008737.2-201ENST00000599446 118 ntBASIC-0.04□□□□□ -2.42
CD74P04233 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.05□□□□□ -2.42
CD74P04233 SNORD114-16-201ENST00000363044 70 ntBASIC-0.05□□□□□ -2.42
CD74P04233 SNORD115-24-201ENST00000363528 82 ntBASIC-0.05□□□□□ -2.42
CD74P04233 RNY4P28-201ENST00000365281 93 ntBASIC-0.05□□□□□ -2.42
CD74P04233 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.05□□□□□ -2.42
CD74P04233 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.05□□□□□ -2.42
CD74P04233 RNU6-1160P-201ENST00000384546 104 ntBASIC-0.05□□□□□ -2.42
CD74P04233 MIR606-201ENST00000384851 96 ntBASIC-0.05□□□□□ -2.42
CD74P04233 MIR593-201ENST00000384856 100 ntBASIC-0.05□□□□□ -2.42
CD74P04233 MIR610-201ENST00000385139 96 ntBASIC-0.05□□□□□ -2.42
CD74P04233 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.05□□□□□ -2.42
CD74P04233 MIR548L-201ENST00000408303 86 ntBASIC-0.05□□□□□ -2.42
CD74P04233 MIR548F4-201ENST00000408515 105 ntBASIC-0.05□□□□□ -2.42
CD74P04233 MTND2P23-201ENST00000422990 651 ntBASIC-0.05□□□□□ -2.42
CD74P04233 RNU7-35P-201ENST00000517174 62 ntBASIC-0.05□□□□□ -2.42
CD74P04233 RNA5SP128-201ENST00000365305 116 ntBASIC-0.06□□□□□ -2.42
CD74P04233 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.06□□□□□ -2.42
CD74P04233 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.06□□□□□ -2.42
CD74P04233 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
CD74P04233 MIR548H3-201ENST00000408771 118 ntBASIC-0.06□□□□□ -2.42
CD74P04233 SNORD127-201ENST00000458892 86 ntBASIC-0.06□□□□□ -2.42
CD74P04233 RPL39P34-201ENST00000477141 156 ntBASIC-0.06□□□□□ -2.42
CD74P04233 MTND1P19-201ENST00000511780 315 ntBASIC-0.06□□□□□ -2.42
CD74P04233 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.06□□□□□ -2.42
CD74P04233 SNORD67.1-201ENST00000516618 108 ntBASIC-0.06□□□□□ -2.42
CD74P04233 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.06□□□□□ -2.42
CD74P04233 AC138749.4-201ENST00000563970 127 ntBASIC-0.06□□□□□ -2.42
CD74P04233 MIR4308-201ENST00000580634 81 ntBASIC-0.06□□□□□ -2.42
CD74P04233 AC105081.1-201ENST00000617727 106 ntBASIC-0.06□□□□□ -2.42
CD74P04233 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.07□□□□□ -2.42
CD74P04233 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.07□□□□□ -2.42
CD74P04233 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.07□□□□□ -2.42
CD74P04233 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.07□□□□□ -2.42
CD74P04233 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.07□□□□□ -2.42
CD74P04233 RNU6-690P-201ENST00000365242 106 ntBASIC-0.07□□□□□ -2.42
CD74P04233 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.07□□□□□ -2.42
CD74P04233 MIR4305-201ENST00000583252 102 ntBASIC-0.07□□□□□ -2.42
CD74P04233 MIR548AE2-201ENST00000583456 67 ntBASIC-0.07□□□□□ -2.42
CD74P04233 MIR4290-201ENST00000583807 95 ntBASIC-0.07□□□□□ -2.42
CD74P04233 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.07□□□□□ -2.42
CD74P04233 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.07□□□□□ -2.42
CD74P04233 Y_RNA.11-201ENST00000362375 109 ntBASIC-0.08□□□□□ -2.42
CD74P04233 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.08□□□□□ -2.42
CD74P04233 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.08□□□□□ -2.42
CD74P04233 RNU6-756P-201ENST00000383997 107 ntBASIC-0.08□□□□□ -2.42
CD74P04233 Y_RNA.459-201ENST00000384251 102 ntBASIC-0.08□□□□□ -2.42
CD74P04233 MIR145-201ENST00000384967 88 ntBASIC-0.08□□□□□ -2.42
CD74P04233 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
CD74P04233 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.08□□□□□ -2.42
CD74P04233 RNU7-137P-201ENST00000516788 62 ntBASIC-0.08□□□□□ -2.42
CD74P04233 AL117187.1-201ENST00000555482 181 ntBASIC-0.08□□□□□ -2.42
CD74P04233 AL359881.1-201ENST00000602916 267 ntBASIC-0.08□□□□□ -2.42
CD74P04233 RNU1-29P-201ENST00000606574 126 ntBASIC-0.08□□□□□ -2.42
CD74P04233 U6.106-201ENST00000636360 105 ntBASIC-0.08□□□□□ -2.42
CD74P04233 MIR6759-201ENST00000638110 65 ntBASIC-0.08□□□□□ -2.42
CD74P04233 RNU6-275P-201ENST00000364910 107 ntBASIC-0.09□□□□□ -2.42
CD74P04233 RNU6-702P-201ENST00000364982 107 ntBASIC-0.09□□□□□ -2.42
CD74P04233 AC108059.2-201ENST00000434626 151 ntBASIC-0.09□□□□□ -2.42
CD74P04233 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.1□□□□□ -2.43
CD74P04233 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.1□□□□□ -2.43
CD74P04233 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.1□□□□□ -2.43
CD74P04233 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.1□□□□□ -2.43
CD74P04233 RNU7-104P-201ENST00000459398 79 ntBASIC-0.1□□□□□ -2.43
CD74P04233 RNU2-35P-201ENST00000516446 142 ntBASIC-0.1□□□□□ -2.43
CD74P04233 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.1□□□□□ -2.43
CD74P04233 SNORD115-2-201ENST00000362842 82 ntBASIC-0.11□□□□□ -2.43
CD74P04233 SNORA63-201ENST00000363450 132 ntBASIC-0.11□□□□□ -2.43
CD74P04233 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.11□□□□□ -2.43
CD74P04233 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.11□□□□□ -2.43
CD74P04233 RNU6-726P-201ENST00000364680 107 ntBASIC-0.11□□□□□ -2.43
CD74P04233 RNY1P2-201ENST00000364820 117 ntBASIC-0.11□□□□□ -2.43
CD74P04233 SNORD115-20-201ENST00000365099 82 ntBASIC-0.11□□□□□ -2.43
CD74P04233 RNU6-768P-201ENST00000384683 107 ntBASIC-0.11□□□□□ -2.43
CD74P04233 RNU6-848P-201ENST00000515948 107 ntBASIC-0.11□□□□□ -2.43
CD74P04233 RNU6-240P-201ENST00000516098 97 ntBASIC-0.11□□□□□ -2.43
CD74P04233 RNU6-617P-201ENST00000516147 107 ntBASIC-0.11□□□□□ -2.43
CD74P04233 RNU6-473P-201ENST00000516164 107 ntBASIC-0.11□□□□□ -2.43
CD74P04233 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.11□□□□□ -2.43
CD74P04233 RNA5SP395-201ENST00000516567 118 ntBASIC-0.11□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 209 ms