Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 Y_RNA.290-201ENST00000364879 114 ntBASIC1.42□□□□□ -2.18
SPDEFO95238 RNA5SP126-201ENST00000365092 109 ntBASIC1.42□□□□□ -2.18
SPDEFO95238 RNU6-955P-201ENST00000410497 104 ntBASIC1.42□□□□□ -2.18
SPDEFO95238 RNU6-1054P-201ENST00000411293 104 ntBASIC1.42□□□□□ -2.18
SPDEFO95238 MRPL35P3-201ENST00000421557 364 ntBASIC1.42□□□□□ -2.18
SPDEFO95238 RNU1-41P-201ENST00000516161 162 ntBASIC1.42□□□□□ -2.18
SPDEFO95238 RNU1-48P-201ENST00000516400 162 ntBASIC1.42□□□□□ -2.18
SPDEFO95238 RNU6-844P-201ENST00000517175 102 ntBASIC1.42□□□□□ -2.18
SPDEFO95238 AC133485.1-201ENST00000567176 124 ntBASIC1.42□□□□□ -2.18
SPDEFO95238 AP001362.1-201ENST00000625165 124 ntBASIC1.42□□□□□ -2.18
SPDEFO95238 RNU6-580P-201ENST00000365159 107 ntBASIC1.41□□□□□ -2.18
SPDEFO95238 Y_RNA.467-201ENST00000384297 102 ntBASIC1.41□□□□□ -2.18
SPDEFO95238 Y_RNA.558-201ENST00000384685 113 ntBASIC1.41□□□□□ -2.18
SPDEFO95238 MIR9-3-201ENST00000385084 90 ntBASIC1.41□□□□□ -2.18
SPDEFO95238 AC109327.2-201ENST00000448339 378 ntBASIC1.41□□□□□ -2.18
SPDEFO95238 uc_338.6-201ENST00000613544 171 ntBASIC1.41□□□□□ -2.18
SPDEFO95238 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.41□□□□□ -2.18
SPDEFO95238 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.4□□□□□ -2.18
SPDEFO95238 Y_RNA.168-201ENST00000363740 102 ntBASIC1.4□□□□□ -2.19
SPDEFO95238 RNU6-1163P-201ENST00000364516 107 ntBASIC1.4□□□□□ -2.19
SPDEFO95238 RNY1P2-201ENST00000364820 117 ntBASIC1.4□□□□□ -2.19
SPDEFO95238 MT-TF-201ENST00000387314 71 ntBASIC1.4□□□□□ -2.19
SPDEFO95238 RNA5SP95-201ENST00000410319 137 ntBASIC1.4□□□□□ -2.19
SPDEFO95238 Y_RNA.705-201ENST00000516862 110 ntBASIC1.4□□□□□ -2.19
SPDEFO95238 MIR4255-201ENST00000579351 72 ntBASIC1.4□□□□□ -2.19
SPDEFO95238 U7.3-201ENST00000616123 62 ntBASIC1.4□□□□□ -2.19
SPDEFO95238 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
SPDEFO95238 SNORD38.2-201ENST00000384470 69 ntBASIC1.39□□□□□ -2.19
SPDEFO95238 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.39□□□□□ -2.19
SPDEFO95238 U8.15-201ENST00000390947 134 ntBASIC1.39□□□□□ -2.19
SPDEFO95238 MIR548G-201ENST00000408442 89 ntBASIC1.39□□□□□ -2.19
SPDEFO95238 AC048334.1-201ENST00000477975 159 ntBASIC1.39□□□□□ -2.19
SPDEFO95238 SNORA72.7-201ENST00000516349 94 ntBASIC1.39□□□□□ -2.19
SPDEFO95238 RN7SKP88-201ENST00000516847 250 ntBASIC1.39□□□□□ -2.19
SPDEFO95238 RNU6-902P-201ENST00000517212 91 ntBASIC1.39□□□□□ -2.19
SPDEFO95238 7SK.8-201ENST00000612110 250 ntBASIC1.39□□□□□ -2.19
SPDEFO95238 7SK.11-201ENST00000615477 250 ntBASIC1.39□□□□□ -2.19
SPDEFO95238 SEPT14P17-201ENST00000617978 177 ntBASIC1.39□□□□□ -2.19
SPDEFO95238 7SK.13-201ENST00000622040 250 ntBASIC1.39□□□□□ -2.19
SPDEFO95238 AC084768.2-201ENST00000622736 221 ntBASIC1.39□□□□□ -2.19
SPDEFO95238 SNORD26-201ENST00000384147 75 ntBASIC1.38□□□□□ -2.19
SPDEFO95238 RNU6-813P-201ENST00000384691 107 ntBASIC1.38□□□□□ -2.19
SPDEFO95238 RNU6-972P-201ENST00000391208 107 ntBASIC1.38□□□□□ -2.19
SPDEFO95238 MIR1302-4-201ENST00000408701 150 ntBASIC1.38□□□□□ -2.19
SPDEFO95238 RNU6-887P-201ENST00000410660 100 ntBASIC1.38□□□□□ -2.19
SPDEFO95238 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.38□□□□□ -2.19
SPDEFO95238 BTF3P4-201ENST00000418852 495 ntBASIC1.38□□□□□ -2.19
SPDEFO95238 AC003989.2-201ENST00000440224 169 ntBASIC1.38□□□□□ -2.19
SPDEFO95238 RPS29P11-201ENST00000496507 171 ntBASIC1.38□□□□□ -2.19
SPDEFO95238 RNU6-162P-201ENST00000516228 103 ntBASIC1.38□□□□□ -2.19
SPDEFO95238 RNU6-90P-201ENST00000606352 106 ntBASIC1.38□□□□□ -2.19
SPDEFO95238 HSBP1P2-201ENST00000299671 229 ntBASIC1.37□□□□□ -2.19
SPDEFO95238 SNORD73B-201ENST00000364394 72 ntBASIC1.37□□□□□ -2.19
SPDEFO95238 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
SPDEFO95238 U8.13-201ENST00000390842 128 ntBASIC1.37□□□□□ -2.19
SPDEFO95238 MIR18B-201ENST00000454574 71 ntBASIC1.37□□□□□ -2.19
SPDEFO95238 SNORA31.2-201ENST00000516019 134 ntBASIC1.37□□□□□ -2.19
SPDEFO95238 AC138749.4-201ENST00000563970 127 ntBASIC1.37□□□□□ -2.19
SPDEFO95238 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.37□□□□□ -2.19
SPDEFO95238 RNU6-1244P-201ENST00000363614 108 ntBASIC1.36□□□□□ -2.19
SPDEFO95238 Y_RNA.567-201ENST00000384736 106 ntBASIC1.36□□□□□ -2.19
SPDEFO95238 SPINT5P-201ENST00000448174 155 ntBASIC1.36□□□□□ -2.19
SPDEFO95238 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.36□□□□□ -2.19
SPDEFO95238 AC026421.1-201ENST00000519101 163 ntBASIC1.36□□□□□ -2.19
SPDEFO95238 RNU6-86P-201ENST00000606534 107 ntBASIC1.36□□□□□ -2.19
SPDEFO95238 AC012676.2-201ENST00000619258 186 ntBASIC1.36□□□□□ -2.19
SPDEFO95238 U6.109-201ENST00000636749 87 ntBASIC1.36□□□□□ -2.19
SPDEFO95238 AC008163.1-202ENST00000636004 2889 ntBASIC1.35□□□□□ -2.19
SPDEFO95238 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
SPDEFO95238 Y_RNA.173-201ENST00000363776 113 ntBASIC1.35□□□□□ -2.19
SPDEFO95238 SNORA2B-201ENST00000384583 137 ntBASIC1.35□□□□□ -2.19
SPDEFO95238 SNORA75.2-201ENST00000391138 150 ntBASIC1.35□□□□□ -2.19
SPDEFO95238 SNORA75.3-201ENST00000391231 150 ntBASIC1.35□□□□□ -2.19
SPDEFO95238 RNU6-295P-201ENST00000516901 104 ntBASIC1.35□□□□□ -2.19
SPDEFO95238 RNU6-762P-201ENST00000517107 102 ntBASIC1.35□□□□□ -2.19
SPDEFO95238 MTND5P40-201ENST00000559945 246 ntBASIC1.35□□□□□ -2.19
SPDEFO95238 AC090897.1-201ENST00000580909 226 ntBASIC1.35□□□□□ -2.19
SPDEFO95238 MIR3945-201ENST00000581853 98 ntBASIC1.35□□□□□ -2.19
SPDEFO95238 MIR502-201ENST00000606349 86 ntBASIC1.35□□□□□ -2.19
SPDEFO95238 MIR6845-201ENST00000613182 61 ntBASIC1.35□□□□□ -2.19
SPDEFO95238 RNA5SP133-201ENST00000363368 119 ntBASIC1.34□□□□□ -2.19
SPDEFO95238 Y_RNA.330-201ENST00000365230 109 ntBASIC1.34□□□□□ -2.19
SPDEFO95238 Y_RNA.363-201ENST00000365529 113 ntBASIC1.34□□□□□ -2.19
SPDEFO95238 SNORA40.18-201ENST00000391200 128 ntBASIC1.34□□□□□ -2.19
SPDEFO95238 AC103810.7-201ENST00000607821 91 ntBASIC1.34□□□□□ -2.19
SPDEFO95238 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
SPDEFO95238 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
SPDEFO95238 SNORD113.3-201ENST00000364630 78 ntBASIC1.33□□□□□ -2.2
SPDEFO95238 SNORD58A-201ENST00000383875 65 ntBASIC1.33□□□□□ -2.2
SPDEFO95238 MIR320A-201ENST00000385302 82 ntBASIC1.33□□□□□ -2.2
SPDEFO95238 SNORA26.9-201ENST00000391322 122 ntBASIC1.33□□□□□ -2.2
SPDEFO95238 AC023790.1-201ENST00000482174 347 ntBASIC1.33□□□□□ -2.2
SPDEFO95238 AC036111.3-201ENST00000526389 112 ntBASIC1.33□□□□□ -2.2
SPDEFO95238 MIR26B-201ENST00000362251 77 ntBASIC1.32□□□□□ -2.2
SPDEFO95238 Y_RNA.119-201ENST00000363301 96 ntBASIC1.32□□□□□ -2.2
SPDEFO95238 SNORD116-10-201ENST00000363791 102 ntBASIC1.32□□□□□ -2.2
SPDEFO95238 Y_RNA.190-201ENST00000363964 101 ntBASIC1.32□□□□□ -2.2
SPDEFO95238 RNU6-1134P-201ENST00000365156 101 ntBASIC1.32□□□□□ -2.2
SPDEFO95238 snoU13.21-201ENST00000459368 105 ntBASIC1.32□□□□□ -2.2
SPDEFO95238 snoU13.15-201ENST00000459407 104 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms