Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 RNU6-865P-201ENST00000364772 107 ntBASIC-0.61□□□□□ -2.51
UPK1BO75841 Y_RNA.505-201ENST00000384489 102 ntBASIC-0.61□□□□□ -2.51
UPK1BO75841 RNU6-429P-201ENST00000384582 108 ntBASIC-0.61□□□□□ -2.51
UPK1BO75841 MIR599-201ENST00000385069 95 ntBASIC-0.61□□□□□ -2.51
UPK1BO75841 AL022718.1-201ENST00000412004 84 ntBASIC-0.61□□□□□ -2.51
UPK1BO75841 TRAJ51-201ENST00000504127 63 ntBASIC-0.61□□□□□ -2.51
UPK1BO75841 SNORD116-25-201ENST00000516517 92 ntBASIC-0.61□□□□□ -2.51
UPK1BO75841 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.61□□□□□ -2.51
UPK1BO75841 AL442663.2-201ENST00000554385 511 ntBASIC-0.61□□□□□ -2.51
UPK1BO75841 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.61□□□□□ -2.51
UPK1BO75841 AL365265.1-201ENST00000621045 234 ntBASIC-0.61□□□□□ -2.51
UPK1BO75841 MIR4788-201ENST00000639104 80 ntBASIC-0.61□□□□□ -2.51
UPK1BO75841 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.61□□□□□ -2.51
UPK1BO75841 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.62□□□□□ -2.51
UPK1BO75841 RNU6-978P-201ENST00000364371 103 ntBASIC-0.62□□□□□ -2.51
UPK1BO75841 SNORD42.2-201ENST00000365570 69 ntBASIC-0.62□□□□□ -2.51
UPK1BO75841 Y_RNA.419-201ENST00000384041 102 ntBASIC-0.62□□□□□ -2.51
UPK1BO75841 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.62□□□□□ -2.51
UPK1BO75841 MIR635-201ENST00000384830 98 ntBASIC-0.62□□□□□ -2.51
UPK1BO75841 RNU6-284P-201ENST00000411105 106 ntBASIC-0.62□□□□□ -2.51
UPK1BO75841 MTND4LP11-201ENST00000422184 280 ntBASIC-0.62□□□□□ -2.51
UPK1BO75841 SNORD2.1-201ENST00000458762 69 ntBASIC-0.62□□□□□ -2.51
UPK1BO75841 MTND3P22-201ENST00000510932 243 ntBASIC-0.62□□□□□ -2.51
UPK1BO75841 SNORA25.13-201ENST00000516395 103 ntBASIC-0.62□□□□□ -2.51
UPK1BO75841 RNU6-570P-201ENST00000517051 105 ntBASIC-0.62□□□□□ -2.51
UPK1BO75841 MIR548AE2-201ENST00000583456 67 ntBASIC-0.62□□□□□ -2.51
UPK1BO75841 MIR6759-201ENST00000638110 65 ntBASIC-0.62□□□□□ -2.51
UPK1BO75841 SNORD114-10-201ENST00000363409 72 ntBASIC-0.63□□□□□ -2.51
UPK1BO75841 RNU6-509P-201ENST00000363519 107 ntBASIC-0.63□□□□□ -2.51
UPK1BO75841 RNU6-449P-201ENST00000383914 107 ntBASIC-0.63□□□□□ -2.51
UPK1BO75841 RNU4-43P-201ENST00000410628 137 ntBASIC-0.63□□□□□ -2.51
UPK1BO75841 AC244250.2-201ENST00000418731 148 ntBASIC-0.63□□□□□ -2.51
UPK1BO75841 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-0.63□□□□□ -2.51
UPK1BO75841 RPS29P8-201ENST00000445109 171 ntBASIC-0.63□□□□□ -2.51
UPK1BO75841 AC109327.2-201ENST00000448339 378 ntBASIC-0.63□□□□□ -2.51
UPK1BO75841 AL121914.1-201ENST00000450188 156 ntBASIC-0.63□□□□□ -2.51
UPK1BO75841 RNU7-10P-201ENST00000607194 63 ntBASIC-0.63□□□□□ -2.51
UPK1BO75841 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.64□□□□□ -2.51
UPK1BO75841 SNORD115-2-201ENST00000362842 82 ntBASIC-0.64□□□□□ -2.51
UPK1BO75841 RNA5SP257-201ENST00000363023 116 ntBASIC-0.64□□□□□ -2.51
UPK1BO75841 Y_RNA.276-201ENST00000364732 109 ntBASIC-0.64□□□□□ -2.51
UPK1BO75841 SNORD115-20-201ENST00000365099 82 ntBASIC-0.64□□□□□ -2.51
UPK1BO75841 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.64□□□□□ -2.51
UPK1BO75841 MIR624-201ENST00000385217 97 ntBASIC-0.64□□□□□ -2.51
UPK1BO75841 RNA5SP285-201ENST00000516619 119 ntBASIC-0.64□□□□□ -2.51
UPK1BO75841 MIR4500-201ENST00000579472 76 ntBASIC-0.64□□□□□ -2.51
UPK1BO75841 Y_RNA.527-201ENST00000384573 102 ntBASIC-0.65□□□□□ -2.51
UPK1BO75841 AC113618.1-201ENST00000416747 285 ntBASIC-0.65□□□□□ -2.51
UPK1BO75841 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.65□□□□□ -2.51
UPK1BO75841 MIR6507-201ENST00000613630 70 ntBASIC-0.65□□□□□ -2.51
UPK1BO75841 RN7SL660P-201ENST00000614852 299 ntBASIC-0.65□□□□□ -2.51
UPK1BO75841 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.66□□□□□ -2.52
UPK1BO75841 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.66□□□□□ -2.52
UPK1BO75841 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.66□□□□□ -2.52
UPK1BO75841 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.66□□□□□ -2.52
UPK1BO75841 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.66□□□□□ -2.52
UPK1BO75841 U8.6-201ENST00000364939 135 ntBASIC-0.66□□□□□ -2.52
UPK1BO75841 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.66□□□□□ -2.52
UPK1BO75841 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.66□□□□□ -2.52
UPK1BO75841 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.66□□□□□ -2.52
UPK1BO75841 RNU4-17P-201ENST00000365598 141 ntBASIC-0.66□□□□□ -2.52
UPK1BO75841 RNU6-811P-201ENST00000384069 107 ntBASIC-0.66□□□□□ -2.52
UPK1BO75841 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.66□□□□□ -2.52
UPK1BO75841 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.66□□□□□ -2.52
UPK1BO75841 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.66□□□□□ -2.52
UPK1BO75841 RNU6-1143P-201ENST00000516125 104 ntBASIC-0.66□□□□□ -2.52
UPK1BO75841 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.66□□□□□ -2.52
UPK1BO75841 AC113195.1-201ENST00000579952 141 ntBASIC-0.66□□□□□ -2.52
UPK1BO75841 MIR4263-201ENST00000584745 83 ntBASIC-0.66□□□□□ -2.52
UPK1BO75841 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.66□□□□□ -2.52
UPK1BO75841 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.66□□□□□ -2.52
UPK1BO75841 MIR655-201ENST00000362159 97 ntBASIC-0.67□□□□□ -2.52
UPK1BO75841 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.67□□□□□ -2.52
UPK1BO75841 Y_RNA.455-201ENST00000384230 98 ntBASIC-0.67□□□□□ -2.52
UPK1BO75841 SNORD75.1-201ENST00000408373 60 ntBASIC-0.67□□□□□ -2.52
UPK1BO75841 AC097635.1-201ENST00000450678 155 ntBASIC-0.67□□□□□ -2.52
UPK1BO75841 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.67□□□□□ -2.52
UPK1BO75841 MIR3920-201ENST00000581751 86 ntBASIC-0.67□□□□□ -2.52
UPK1BO75841 MIR4473-201ENST00000583731 91 ntBASIC-0.67□□□□□ -2.52
UPK1BO75841 MIR6779-201ENST00000617283 64 ntBASIC-0.67□□□□□ -2.52
UPK1BO75841 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.67□□□□□ -2.52
UPK1BO75841 RNU6-474P-201ENST00000384243 107 ntBASIC-0.68□□□□□ -2.52
UPK1BO75841 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.68□□□□□ -2.52
UPK1BO75841 MTND5P20-201ENST00000448677 143 ntBASIC-0.68□□□□□ -2.52
UPK1BO75841 RNU6-988P-201ENST00000519081 107 ntBASIC-0.68□□□□□ -2.52
UPK1BO75841 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.69□□□□□ -2.52
UPK1BO75841 RNA5SP205-201ENST00000364653 136 ntBASIC-0.69□□□□□ -2.52
UPK1BO75841 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.69□□□□□ -2.52
UPK1BO75841 MIR1270-201ENST00000459320 83 ntBASIC-0.69□□□□□ -2.52
UPK1BO75841 AC114755.3-201ENST00000481111 251 ntBASIC-0.69□□□□□ -2.52
UPK1BO75841 Y_RNA.702-201ENST00000516843 96 ntBASIC-0.69□□□□□ -2.52
UPK1BO75841 AP001180.6-201ENST00000584918 159 ntBASIC-0.69□□□□□ -2.52
UPK1BO75841 RNU6-103P-201ENST00000363686 107 ntBASIC-0.7□□□□□ -2.52
UPK1BO75841 SNORD114-11-201ENST00000363738 75 ntBASIC-0.7□□□□□ -2.52
UPK1BO75841 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.7□□□□□ -2.52
UPK1BO75841 RNU6-480P-201ENST00000384332 107 ntBASIC-0.7□□□□□ -2.52
UPK1BO75841 RNU7-195P-201ENST00000458793 62 ntBASIC-0.7□□□□□ -2.52
UPK1BO75841 RNU7-13P-201ENST00000516413 62 ntBASIC-0.7□□□□□ -2.52
UPK1BO75841 RNU2-35P-201ENST00000516446 142 ntBASIC-0.7□□□□□ -2.52
UPK1BO75841 RNU7-188P-201ENST00000517063 64 ntBASIC-0.7□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 359.4 ms