Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 RNU2-35P-201ENST00000516446 142 ntBASIC0.58□□□□□ -2.32
SSX4O60224 Y_RNA.686-201ENST00000516548 134 ntBASIC0.58□□□□□ -2.32
SSX4O60224 RNA5SP33-201ENST00000516687 98 ntBASIC0.58□□□□□ -2.32
SSX4O60224 AC133485.4-201ENST00000561835 220 ntBASIC0.58□□□□□ -2.32
SSX4O60224 AC138907.4-201ENST00000570107 226 ntBASIC0.58□□□□□ -2.32
SSX4O60224 AC090425.1-201ENST00000610007 140 ntBASIC0.58□□□□□ -2.32
SSX4O60224 SNORD115-2-201ENST00000362842 82 ntBASIC0.57□□□□□ -2.32
SSX4O60224 RNU6-309P-201ENST00000364573 106 ntBASIC0.57□□□□□ -2.32
SSX4O60224 SNORD115-20-201ENST00000365099 82 ntBASIC0.57□□□□□ -2.32
SSX4O60224 RNU4-45P-201ENST00000365469 141 ntBASIC0.57□□□□□ -2.32
SSX4O60224 MIR193B-201ENST00000384907 83 ntBASIC0.57□□□□□ -2.32
SSX4O60224 MIR140-201ENST00000385282 100 ntBASIC0.57□□□□□ -2.32
SSX4O60224 Y_RNA.588-201ENST00000391254 102 ntBASIC0.57□□□□□ -2.32
SSX4O60224 MIR936-201ENST00000401264 98 ntBASIC0.57□□□□□ -2.32
SSX4O60224 Y_RNA.651-201ENST00000459380 103 ntBASIC0.57□□□□□ -2.32
SSX4O60224 RNU6-448P-201ENST00000517052 107 ntBASIC0.57□□□□□ -2.32
SSX4O60224 RNU7-35P-201ENST00000517174 62 ntBASIC0.57□□□□□ -2.32
SSX4O60224 MIR4491-201ENST00000581087 68 ntBASIC0.57□□□□□ -2.32
SSX4O60224 AC021443.1-201ENST00000604478 211 ntBASIC0.57□□□□□ -2.32
SSX4O60224 AL589743.1-201ENST00000551932 2712 ntBASIC0.57□□□□□ -2.32
SSX4O60224 Y_RNA.13-201ENST00000362403 112 ntBASIC0.56□□□□□ -2.32
SSX4O60224 RNA5SP347-201ENST00000362445 119 ntBASIC0.56□□□□□ -2.32
SSX4O60224 RNU6-151P-201ENST00000364158 107 ntBASIC0.56□□□□□ -2.32
SSX4O60224 SNORA32-201ENST00000384072 121 ntBASIC0.56□□□□□ -2.32
SSX4O60224 Y_RNA.531-201ENST00000384589 121 ntBASIC0.56□□□□□ -2.32
SSX4O60224 RNU6-733P-201ENST00000410759 104 ntBASIC0.56□□□□□ -2.32
SSX4O60224 Y_RNA.690-201ENST00000516603 95 ntBASIC0.56□□□□□ -2.32
SSX4O60224 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
SSX4O60224 SNORD114-23-201ENST00000363536 72 ntBASIC0.55□□□□□ -2.32
SSX4O60224 RNU6-1130P-201ENST00000365434 107 ntBASIC0.55□□□□□ -2.32
SSX4O60224 RNU6-449P-201ENST00000383914 107 ntBASIC0.55□□□□□ -2.32
SSX4O60224 RNU6-945P-201ENST00000383947 107 ntBASIC0.55□□□□□ -2.32
SSX4O60224 AL603914.1-201ENST00000401964 204 ntBASIC0.55□□□□□ -2.32
SSX4O60224 Y_RNA.617-201ENST00000410920 90 ntBASIC0.55□□□□□ -2.32
SSX4O60224 RNU7-164P-201ENST00000459221 62 ntBASIC0.55□□□□□ -2.32
SSX4O60224 RNU4-54P-201ENST00000516428 129 ntBASIC0.55□□□□□ -2.32
SSX4O60224 MIR6082-201ENST00000613604 109 ntBASIC0.55□□□□□ -2.32
SSX4O60224 Y_RNA.778-201ENST00000620203 90 ntBASIC0.55□□□□□ -2.32
SSX4O60224 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.55□□□□□ -2.32
SSX4O60224 RNA5SP117-201ENST00000365294 118 ntBASIC0.54□□□□□ -2.32
SSX4O60224 SNORA72.6-201ENST00000384520 129 ntBASIC0.54□□□□□ -2.32
SSX4O60224 Y_RNA.580-201ENST00000391004 95 ntBASIC0.54□□□□□ -2.32
SSX4O60224 RNU6-394P-201ENST00000410735 107 ntBASIC0.54□□□□□ -2.32
SSX4O60224 RNA5SP121-201ENST00000516537 101 ntBASIC0.54□□□□□ -2.32
SSX4O60224 AC018659.1-201ENST00000551083 169 ntBASIC0.54□□□□□ -2.32
SSX4O60224 MIR548AE2-201ENST00000583456 67 ntBASIC0.54□□□□□ -2.32
SSX4O60224 FTX_2.1-201ENST00000618816 94 ntBASIC0.54□□□□□ -2.32
SSX4O60224 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
SSX4O60224 SNORD116-18-201ENST00000383961 92 ntBASIC0.53□□□□□ -2.32
SSX4O60224 MIR92A1-201ENST00000385233 78 ntBASIC0.53□□□□□ -2.32
SSX4O60224 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.53□□□□□ -2.32
SSX4O60224 AL157398.1-201ENST00000452981 186 ntBASIC0.53□□□□□ -2.32
SSX4O60224 RNU7-123P-201ENST00000515911 60 ntBASIC0.53□□□□□ -2.32
SSX4O60224 MIR1273G-201ENST00000577677 100 ntBASIC0.53□□□□□ -2.32
SSX4O60224 Y_RNA.150-201ENST00000363562 102 ntBASIC0.52□□□□□ -2.33
SSX4O60224 Y_RNA.270-201ENST00000364693 104 ntBASIC0.52□□□□□ -2.33
SSX4O60224 Y_RNA.366-201ENST00000365540 102 ntBASIC0.52□□□□□ -2.33
SSX4O60224 RNU6-804P-201ENST00000384286 107 ntBASIC0.52□□□□□ -2.33
SSX4O60224 RNU6-679P-201ENST00000391003 106 ntBASIC0.52□□□□□ -2.33
SSX4O60224 RNU6-460P-201ENST00000391158 108 ntBASIC0.52□□□□□ -2.33
SSX4O60224 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.52□□□□□ -2.33
SSX4O60224 RNU7-197P-201ENST00000458836 62 ntBASIC0.52□□□□□ -2.33
SSX4O60224 RNU5E-3P-201ENST00000515913 68 ntBASIC0.52□□□□□ -2.33
SSX4O60224 RNU6-229P-201ENST00000516614 102 ntBASIC0.52□□□□□ -2.33
SSX4O60224 AP003327.1-201ENST00000529684 127 ntBASIC0.52□□□□□ -2.33
SSX4O60224 AC243829.3-201ENST00000622177 108 ntBASIC0.52□□□□□ -2.33
SSX4O60224 Y_RNA.8-201ENST00000362353 102 ntBASIC0.51□□□□□ -2.33
SSX4O60224 PCNPP3-201ENST00000393579 471 ntBASIC0.51□□□□□ -2.33
SSX4O60224 AC098934.3-201ENST00000430450 190 ntBASIC0.51□□□□□ -2.33
SSX4O60224 SNORA25.16-201ENST00000516741 121 ntBASIC0.51□□□□□ -2.33
SSX4O60224 RNU6-765P-201ENST00000516916 99 ntBASIC0.51□□□□□ -2.33
SSX4O60224 MIR3144-201ENST00000579460 79 ntBASIC0.51□□□□□ -2.33
SSX4O60224 MIR5087-201ENST00000635826 76 ntBASIC0.51□□□□□ -2.33
SSX4O60224 AC010487.4-201ENST00000637027 61 ntBASIC0.51□□□□□ -2.33
SSX4O60224 Y_RNA.298-201ENST00000364960 107 ntBASIC0.5□□□□□ -2.33
SSX4O60224 RNU6-886P-201ENST00000384319 105 ntBASIC0.5□□□□□ -2.33
SSX4O60224 MIR513C-201ENST00000401352 84 ntBASIC0.5□□□□□ -2.33
SSX4O60224 SNORD67.1-201ENST00000516618 108 ntBASIC0.5□□□□□ -2.33
SSX4O60224 RNU6-794P-201ENST00000517261 64 ntBASIC0.5□□□□□ -2.33
SSX4O60224 MIR4711-201ENST00000578274 70 ntBASIC0.5□□□□□ -2.33
SSX4O60224 MIR3678-201ENST00000578455 94 ntBASIC0.5□□□□□ -2.33
SSX4O60224 AC108081.1-201ENST00000604358 221 ntBASIC0.5□□□□□ -2.33
SSX4O60224 RNU7-137P-201ENST00000516788 62 ntBASIC0.49□□□□□ -2.33
SSX4O60224 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.49□□□□□ -2.33
SSX4O60224 AL137067.1-201ENST00000615933 120 ntBASIC0.49□□□□□ -2.33
SSX4O60224 RNA5SP133-201ENST00000363368 119 ntBASIC0.48□□□□□ -2.33
SSX4O60224 Y_RNA.398-201ENST00000383952 99 ntBASIC0.48□□□□□ -2.33
SSX4O60224 RNA5SP193-201ENST00000410353 107 ntBASIC0.48□□□□□ -2.33
SSX4O60224 RNU4-69P-201ENST00000410677 143 ntBASIC0.48□□□□□ -2.33
SSX4O60224 MIR1270-201ENST00000459320 83 ntBASIC0.48□□□□□ -2.33
SSX4O60224 SNORA25.12-201ENST00000516202 82 ntBASIC0.48□□□□□ -2.33
SSX4O60224 RN7SKP12-201ENST00000516275 143 ntBASIC0.48□□□□□ -2.33
SSX4O60224 RNA5SP94-201ENST00000516917 108 ntBASIC0.48□□□□□ -2.33
SSX4O60224 DEFB131E-201ENST00000532329 154 ntBASIC0.48□□□□□ -2.33
SSX4O60224 MTND5P34-201ENST00000568888 325 ntBASIC0.48□□□□□ -2.33
SSX4O60224 AL359881.1-201ENST00000602916 267 ntBASIC0.48□□□□□ -2.33
SSX4O60224 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.48□□□□□ -2.33
SSX4O60224 AC092634.7-201ENST00000621022 103 ntBASIC0.48□□□□□ -2.33
SSX4O60224 RNA5SP499-201ENST00000363982 119 ntBASIC0.47□□□□□ -2.33
SSX4O60224 RNU6-915P-201ENST00000364943 103 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 166.7 ms