Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AL365205.2-201ENST00000594586 68 ntBASIC-0.01□□□□□ -2.41
CUX2O14529 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.01□□□□□ -2.41
CUX2O14529 SNORD114-28-201ENST00000363610 72 ntBASIC-0.02□□□□□ -2.41
CUX2O14529 AC074198.2-201ENST00000508153 258 ntBASIC-0.02□□□□□ -2.41
CUX2O14529 RNY1P13-201ENST00000365030 105 ntBASIC-0.03□□□□□ -2.41
CUX2O14529 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.03□□□□□ -2.41
CUX2O14529 MIR610-201ENST00000385139 96 ntBASIC-0.03□□□□□ -2.41
CUX2O14529 RNU4-43P-201ENST00000410628 137 ntBASIC-0.03□□□□□ -2.41
CUX2O14529 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.03□□□□□ -2.41
CUX2O14529 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.03□□□□□ -2.41
CUX2O14529 RNA5SP47-201ENST00000517230 109 ntBASIC-0.03□□□□□ -2.41
CUX2O14529 MIR4639-201ENST00000584938 69 ntBASIC-0.03□□□□□ -2.41
CUX2O14529 AC244669.1-204ENST00000621564 178 ntBASIC-0.03□□□□□ -2.41
CUX2O14529 Y_RNA.422-201ENST00000384054 114 ntBASIC-0.03□□□□□ -2.41
CUX2O14529 RNU6V-201ENST00000384105 107 ntBASIC-0.03□□□□□ -2.41
CUX2O14529 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.03□□□□□ -2.41
CUX2O14529 SNORA25.16-201ENST00000516741 121 ntBASIC-0.03□□□□□ -2.41
CUX2O14529 AC104408.1-201ENST00000605241 170 ntBASIC-0.03□□□□□ -2.41
CUX2O14529 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.03□□□□□ -2.41
CUX2O14529 MIR6828-201ENST00000636181 60 ntBASIC-0.03□□□□□ -2.41
CUX2O14529 MIR198-201ENST00000637333 62 ntBASIC-0.03□□□□□ -2.41
CUX2O14529 RNU4-17P-201ENST00000365598 141 ntBASIC-0.04□□□□□ -2.42
CUX2O14529 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.04□□□□□ -2.42
CUX2O14529 U2.14-201ENST00000615943 113 ntBASIC-0.04□□□□□ -2.42
CUX2O14529 MIR101-2-201ENST00000362195 79 ntBASIC-0.05□□□□□ -2.42
CUX2O14529 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.05□□□□□ -2.42
CUX2O14529 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.05□□□□□ -2.42
CUX2O14529 RNU4-58P-201ENST00000363192 141 ntBASIC-0.05□□□□□ -2.42
CUX2O14529 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.05□□□□□ -2.42
CUX2O14529 MIR7107-201ENST00000611489 80 ntBASIC-0.05□□□□□ -2.42
CUX2O14529 MTND5P32-201ENST00000560711 1802 ntBASIC-0.06□□□□□ -2.42
CUX2O14529 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.06□□□□□ -2.42
CUX2O14529 RNU6-797P-201ENST00000363101 109 ntBASIC-0.06□□□□□ -2.42
CUX2O14529 RNU6-302P-201ENST00000365249 107 ntBASIC-0.06□□□□□ -2.42
CUX2O14529 RNU6-291P-201ENST00000384720 107 ntBASIC-0.06□□□□□ -2.42
CUX2O14529 RNU6-578P-201ENST00000390980 103 ntBASIC-0.06□□□□□ -2.42
CUX2O14529 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.06□□□□□ -2.42
CUX2O14529 MIR6755-201ENST00000619993 66 ntBASIC-0.06□□□□□ -2.42
CUX2O14529 Y_RNA.277-201ENST00000364754 102 ntBASIC-0.07□□□□□ -2.42
CUX2O14529 MIR224-201ENST00000384889 81 ntBASIC-0.07□□□□□ -2.42
CUX2O14529 PCNPP3-201ENST00000393579 471 ntBASIC-0.07□□□□□ -2.42
CUX2O14529 AC096949.1-201ENST00000412047 152 ntBASIC-0.07□□□□□ -2.42
CUX2O14529 MIR8062-201ENST00000621515 85 ntBASIC-0.07□□□□□ -2.42
CUX2O14529 MIR6841-201ENST00000637129 72 ntBASIC-0.07□□□□□ -2.42
CUX2O14529 SNORA42.1-201ENST00000363515 137 ntBASIC-0.08□□□□□ -2.42
CUX2O14529 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.08□□□□□ -2.42
CUX2O14529 MIR624-201ENST00000385217 97 ntBASIC-0.08□□□□□ -2.42
CUX2O14529 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.08□□□□□ -2.42
CUX2O14529 MT-TW-201ENST00000387382 68 ntBASIC-0.08□□□□□ -2.42
CUX2O14529 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
CUX2O14529 RNA5SP33-201ENST00000516687 98 ntBASIC-0.08□□□□□ -2.42
CUX2O14529 RNU6-531P-201ENST00000516694 104 ntBASIC-0.08□□□□□ -2.42
CUX2O14529 SCARNA15-202ENST00000516881 127 ntBASIC-0.08□□□□□ -2.42
CUX2O14529 RNU4-16P-201ENST00000364737 141 ntBASIC-0.09□□□□□ -2.42
CUX2O14529 MIR643-201ENST00000385267 97 ntBASIC-0.09□□□□□ -2.42
CUX2O14529 MIR760-201ENST00000390220 80 ntBASIC-0.09□□□□□ -2.42
CUX2O14529 RNU7-113P-201ENST00000459273 62 ntBASIC-0.09□□□□□ -2.42
CUX2O14529 RNU7-129P-201ENST00000516128 62 ntBASIC-0.09□□□□□ -2.42
CUX2O14529 RNY3P16-201ENST00000516338 101 ntBASIC-0.09□□□□□ -2.42
CUX2O14529 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.09□□□□□ -2.42
CUX2O14529 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.09□□□□□ -2.42
CUX2O14529 MIR4643-201ENST00000577473 78 ntBASIC-0.09□□□□□ -2.42
CUX2O14529 SNORA25.7-201ENST00000364375 127 ntBASIC-0.1□□□□□ -2.42
CUX2O14529 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.1□□□□□ -2.42
CUX2O14529 RNU6-652P-201ENST00000365488 107 ntBASIC-0.1□□□□□ -2.42
CUX2O14529 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.1□□□□□ -2.42
CUX2O14529 RNU6-187P-201ENST00000384139 106 ntBASIC-0.1□□□□□ -2.42
CUX2O14529 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.1□□□□□ -2.42
CUX2O14529 AL442067.1-201ENST00000613261 223 ntBASIC-0.1□□□□□ -2.42
CUX2O14529 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.1□□□□□ -2.42
CUX2O14529 MIR499B-201ENST00000636498 73 ntBASIC-0.1□□□□□ -2.42
CUX2O14529 RNA5SP133-201ENST00000363368 119 ntBASIC-0.1□□□□□ -2.43
CUX2O14529 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.1□□□□□ -2.43
CUX2O14529 MIR593-201ENST00000384856 100 ntBASIC-0.1□□□□□ -2.43
CUX2O14529 RNA5SP245-201ENST00000364239 121 ntBASIC-0.11□□□□□ -2.43
CUX2O14529 RNA5SP128-201ENST00000365305 116 ntBASIC-0.11□□□□□ -2.43
CUX2O14529 RNU6-1227P-201ENST00000383981 107 ntBASIC-0.11□□□□□ -2.43
CUX2O14529 RNY1P6-201ENST00000384193 109 ntBASIC-0.11□□□□□ -2.43
CUX2O14529 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.11□□□□□ -2.43
CUX2O14529 MIR892B-201ENST00000401279 77 ntBASIC-0.11□□□□□ -2.43
CUX2O14529 MIR1207-201ENST00000408249 87 ntBASIC-0.11□□□□□ -2.43
CUX2O14529 RPL39P34-201ENST00000477141 156 ntBASIC-0.11□□□□□ -2.43
CUX2O14529 RNU6-978P-201ENST00000364371 103 ntBASIC-0.12□□□□□ -2.43
CUX2O14529 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.12□□□□□ -2.43
CUX2O14529 MIR548L-201ENST00000408303 86 ntBASIC-0.12□□□□□ -2.43
CUX2O14529 MTCYBP6-201ENST00000441810 138 ntBASIC-0.12□□□□□ -2.43
CUX2O14529 MTATP8P1-201ENST00000467115 207 ntBASIC-0.12□□□□□ -2.43
CUX2O14529 RNU7-35P-201ENST00000517174 62 ntBASIC-0.12□□□□□ -2.43
CUX2O14529 RNU2-4P-201ENST00000606190 192 ntBASIC-0.12□□□□□ -2.43
CUX2O14529 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.13□□□□□ -2.43
CUX2O14529 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.13□□□□□ -2.43
CUX2O14529 MIR145-201ENST00000384967 88 ntBASIC-0.13□□□□□ -2.43
CUX2O14529 MIR4290-201ENST00000583807 95 ntBASIC-0.13□□□□□ -2.43
CUX2O14529 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.14□□□□□ -2.43
CUX2O14529 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.14□□□□□ -2.43
CUX2O14529 AP003072.1-201ENST00000531740 145 ntBASIC-0.14□□□□□ -2.43
CUX2O14529 SNORD115-24-201ENST00000363528 82 ntBASIC-0.15□□□□□ -2.43
CUX2O14529 RNU6-127P-201ENST00000390897 107 ntBASIC-0.15□□□□□ -2.43
CUX2O14529 RNU6-493P-201ENST00000391321 108 ntBASIC-0.15□□□□□ -2.43
CUX2O14529 MIR5706-201ENST00000579841 80 ntBASIC-0.15□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 187.2 ms