Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 SNORD37.2-201ENST00000391075 66 ntBASIC0.46□□□□□ -2.34
RTCAO00442 RPL39P25-201ENST00000449384 154 ntBASIC0.46□□□□□ -2.34
RTCAO00442 RNU2-35P-201ENST00000516446 142 ntBASIC0.46□□□□□ -2.34
RTCAO00442 AC112693.2-201ENST00000556538 232 ntBASIC0.46□□□□□ -2.34
RTCAO00442 SNORD18A-201ENST00000363753 72 ntBASIC0.45□□□□□ -2.34
RTCAO00442 RNY1P11-201ENST00000363759 113 ntBASIC0.45□□□□□ -2.34
RTCAO00442 Y_RNA.299-201ENST00000364973 94 ntBASIC0.45□□□□□ -2.34
RTCAO00442 SNORA36.2-201ENST00000384004 127 ntBASIC0.45□□□□□ -2.34
RTCAO00442 AL512326.2-201ENST00000426359 151 ntBASIC0.45□□□□□ -2.34
RTCAO00442 RNA5SP436-201ENST00000516020 115 ntBASIC0.45□□□□□ -2.34
RTCAO00442 RNU6-794P-201ENST00000517261 64 ntBASIC0.45□□□□□ -2.34
RTCAO00442 Y_RNA.778-201ENST00000620203 90 ntBASIC0.45□□□□□ -2.34
RTCAO00442 AC090625.1-201ENST00000357130 210 ntBASIC0.44□□□□□ -2.34
RTCAO00442 Y_RNA.13-201ENST00000362403 112 ntBASIC0.44□□□□□ -2.34
RTCAO00442 RNU6-449P-201ENST00000383914 107 ntBASIC0.44□□□□□ -2.34
RTCAO00442 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.44□□□□□ -2.34
RTCAO00442 AC092628.1-201ENST00000436250 252 ntBASIC0.44□□□□□ -2.34
RTCAO00442 RNU6-240P-201ENST00000516098 97 ntBASIC0.44□□□□□ -2.34
RTCAO00442 Y_RNA.690-201ENST00000516603 95 ntBASIC0.44□□□□□ -2.34
RTCAO00442 RNA5SP33-201ENST00000516687 98 ntBASIC0.44□□□□□ -2.34
RTCAO00442 RNU6-135P-201ENST00000516769 101 ntBASIC0.44□□□□□ -2.34
RTCAO00442 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.44□□□□□ -2.34
RTCAO00442 SNORD114-10-201ENST00000363409 72 ntBASIC0.43□□□□□ -2.34
RTCAO00442 Y_RNA.174-201ENST00000363781 105 ntBASIC0.43□□□□□ -2.34
RTCAO00442 RNA5SP117-201ENST00000365294 118 ntBASIC0.43□□□□□ -2.34
RTCAO00442 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
RTCAO00442 PCNPP3-201ENST00000393579 471 ntBASIC0.43□□□□□ -2.34
RTCAO00442 AC074198.2-201ENST00000508153 258 ntBASIC0.43□□□□□ -2.34
RTCAO00442 AC021443.1-201ENST00000604478 211 ntBASIC0.43□□□□□ -2.34
RTCAO00442 uc_338.16-201ENST00000621804 95 ntBASIC0.43□□□□□ -2.34
RTCAO00442 RNU6-309P-201ENST00000364573 106 ntBASIC0.42□□□□□ -2.34
RTCAO00442 RNU4-11P-201ENST00000365287 132 ntBASIC0.42□□□□□ -2.34
RTCAO00442 SNORA50A-201ENST00000384225 134 ntBASIC0.42□□□□□ -2.34
RTCAO00442 AC114737.2-201ENST00000421583 173 ntBASIC0.42□□□□□ -2.34
RTCAO00442 RNA5SP94-201ENST00000516917 108 ntBASIC0.42□□□□□ -2.34
RTCAO00442 MIR548AE2-201ENST00000583456 67 ntBASIC0.42□□□□□ -2.34
RTCAO00442 RNU6-403P-201ENST00000363163 104 ntBASIC0.41□□□□□ -2.34
RTCAO00442 Y_RNA.298-201ENST00000364960 107 ntBASIC0.41□□□□□ -2.34
RTCAO00442 RNU6-886P-201ENST00000384319 105 ntBASIC0.41□□□□□ -2.34
RTCAO00442 RNU4-69P-201ENST00000410677 143 ntBASIC0.41□□□□□ -2.34
RTCAO00442 RNU7-164P-201ENST00000459221 62 ntBASIC0.41□□□□□ -2.34
RTCAO00442 snoU13.18-201ENST00000459483 104 ntBASIC0.41□□□□□ -2.34
RTCAO00442 Y_RNA.686-201ENST00000516548 134 ntBASIC0.41□□□□□ -2.34
RTCAO00442 RNU7-137P-201ENST00000516788 62 ntBASIC0.41□□□□□ -2.34
RTCAO00442 MIR3678-201ENST00000578455 94 ntBASIC0.41□□□□□ -2.34
RTCAO00442 MIR3121-201ENST00000579680 77 ntBASIC0.41□□□□□ -2.34
RTCAO00442 AC098479.1-201ENST00000609225 154 ntBASIC0.41□□□□□ -2.34
RTCAO00442 AP001340.1-201ENST00000624405 217 ntBASIC0.41□□□□□ -2.34
RTCAO00442 Y_RNA.536-201ENST00000384621 113 ntBASIC0.4□□□□□ -2.35
RTCAO00442 Y_RNA.555-201ENST00000384673 110 ntBASIC0.4□□□□□ -2.35
RTCAO00442 RNU7-123P-201ENST00000515911 60 ntBASIC0.4□□□□□ -2.35
RTCAO00442 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.4□□□□□ -2.35
RTCAO00442 AC092634.7-201ENST00000621022 103 ntBASIC0.4□□□□□ -2.35
RTCAO00442 MIR6513-201ENST00000621188 64 ntBASIC0.4□□□□□ -2.35
RTCAO00442 AL589743.1-201ENST00000551932 2712 ntBASIC0.39□□□□□ -2.35
RTCAO00442 RNU6-151P-201ENST00000364158 107 ntBASIC0.39□□□□□ -2.35
RTCAO00442 Y_RNA.366-201ENST00000365540 102 ntBASIC0.39□□□□□ -2.35
RTCAO00442 MIR1270-201ENST00000459320 83 ntBASIC0.39□□□□□ -2.35
RTCAO00442 MIR3144-201ENST00000579460 79 ntBASIC0.39□□□□□ -2.35
RTCAO00442 AC022709.1-201ENST00000615967 87 ntBASIC0.39□□□□□ -2.35
RTCAO00442 AC243829.3-201ENST00000622177 108 ntBASIC0.39□□□□□ -2.35
RTCAO00442 Y_RNA.32-201ENST00000362589 110 ntBASIC0.38□□□□□ -2.35
RTCAO00442 RNU4-58P-201ENST00000363192 141 ntBASIC0.38□□□□□ -2.35
RTCAO00442 SNORD118-201ENST00000363593 134 ntBASIC0.38□□□□□ -2.35
RTCAO00442 Y_RNA.280-201ENST00000364765 112 ntBASIC0.38□□□□□ -2.35
RTCAO00442 RNU6-1130P-201ENST00000365434 107 ntBASIC0.38□□□□□ -2.35
RTCAO00442 RNU6-291P-201ENST00000384720 107 ntBASIC0.38□□□□□ -2.35
RTCAO00442 Y_RNA.617-201ENST00000410920 90 ntBASIC0.38□□□□□ -2.35
RTCAO00442 SNORA40.8-201ENST00000411034 126 ntBASIC0.38□□□□□ -2.35
RTCAO00442 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.38□□□□□ -2.35
RTCAO00442 RNU6-863P-201ENST00000515989 104 ntBASIC0.38□□□□□ -2.35
RTCAO00442 SNORD67.1-201ENST00000516618 108 ntBASIC0.38□□□□□ -2.35
RTCAO00442 SNORA25.16-201ENST00000516741 121 ntBASIC0.38□□□□□ -2.35
RTCAO00442 AL359881.1-201ENST00000602916 267 ntBASIC0.38□□□□□ -2.35
RTCAO00442 AL137067.1-201ENST00000615933 120 ntBASIC0.38□□□□□ -2.35
RTCAO00442 MIR6515-201ENST00000619843 57 ntBASIC0.38□□□□□ -2.35
RTCAO00442 MIR6828-201ENST00000636181 60 ntBASIC0.38□□□□□ -2.35
RTCAO00442 RNU6-508P-201ENST00000363231 103 ntBASIC0.37□□□□□ -2.35
RTCAO00442 Y_RNA.270-201ENST00000364693 104 ntBASIC0.37□□□□□ -2.35
RTCAO00442 RNA5SP517-201ENST00000364724 117 ntBASIC0.37□□□□□ -2.35
RTCAO00442 RNY1P2-201ENST00000364820 117 ntBASIC0.37□□□□□ -2.35
RTCAO00442 Y_RNA.400-201ENST00000383963 111 ntBASIC0.37□□□□□ -2.35
RTCAO00442 SNORA32-201ENST00000384072 121 ntBASIC0.37□□□□□ -2.35
RTCAO00442 MIR216A-201ENST00000385063 110 ntBASIC0.37□□□□□ -2.35
RTCAO00442 MIR518A1-201ENST00000385068 85 ntBASIC0.37□□□□□ -2.35
RTCAO00442 Y_RNA.692-201ENST00000516627 105 ntBASIC0.37□□□□□ -2.35
RTCAO00442 RNU6-1212P-201ENST00000517023 104 ntBASIC0.37□□□□□ -2.35
RTCAO00442 MIR548X2-201ENST00000579776 100 ntBASIC0.37□□□□□ -2.35
RTCAO00442 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.37□□□□□ -2.35
RTCAO00442 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.37□□□□□ -2.35
RTCAO00442 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.37□□□□□ -2.35
RTCAO00442 MIRLET7D-201ENST00000362263 87 ntBASIC0.36□□□□□ -2.35
RTCAO00442 Y_RNA.464-201ENST00000384282 110 ntBASIC0.36□□□□□ -2.35
RTCAO00442 MIR936-201ENST00000401264 98 ntBASIC0.36□□□□□ -2.35
RTCAO00442 MIR513C-201ENST00000401352 84 ntBASIC0.36□□□□□ -2.35
RTCAO00442 RNU6-469P-201ENST00000516253 101 ntBASIC0.36□□□□□ -2.35
RTCAO00442 RNA5SP134-201ENST00000516492 96 ntBASIC0.36□□□□□ -2.35
RTCAO00442 SNORA31.14-201ENST00000516728 116 ntBASIC0.36□□□□□ -2.35
RTCAO00442 AC138749.4-201ENST00000563970 127 ntBASIC0.36□□□□□ -2.35
RTCAO00442 AC108081.1-201ENST00000604358 221 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 334 ms