Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 RNU6-1006P-201ENST00000516998 103 ntBASIC-2.4□□□□□ -2.79
CHKB-CPT1BH3BT56 TPTEP1-208ENST00000636884 213 ntBASIC-2.4□□□□□ -2.79
CHKB-CPT1BH3BT56 Y_RNA.23-201ENST00000362496 106 ntBASIC-2.41□□□□□ -2.8
CHKB-CPT1BH3BT56 RNU6-1068P-201ENST00000410958 103 ntBASIC-2.41□□□□□ -2.8
CHKB-CPT1BH3BT56 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-2.41□□□□□ -2.8
CHKB-CPT1BH3BT56 AC013791.1-201ENST00000616619 62 ntBASIC-2.41□□□□□ -2.8
CHKB-CPT1BH3BT56 MIR6888-201ENST00000621977 67 ntBASIC-2.41□□□□□ -2.8
CHKB-CPT1BH3BT56 Y_RNA.2-201ENST00000362330 96 ntBASIC-2.42□□□□□ -2.8
CHKB-CPT1BH3BT56 RNU6-1214P-201ENST00000363650 109 ntBASIC-2.42□□□□□ -2.8
CHKB-CPT1BH3BT56 Y_RNA.223-201ENST00000364290 113 ntBASIC-2.42□□□□□ -2.8
CHKB-CPT1BH3BT56 Y_RNA.462-201ENST00000384268 102 ntBASIC-2.42□□□□□ -2.8
CHKB-CPT1BH3BT56 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-2.42□□□□□ -2.8
CHKB-CPT1BH3BT56 RNU6-570P-201ENST00000517051 105 ntBASIC-2.42□□□□□ -2.8
CHKB-CPT1BH3BT56 AC087741.2-201ENST00000619415 172 ntBASIC-2.42□□□□□ -2.8
CHKB-CPT1BH3BT56 SNORA63.6-201ENST00000364921 119 ntBASIC-2.43□□□□□ -2.8
CHKB-CPT1BH3BT56 Y_RNA.301-201ENST00000364990 103 ntBASIC-2.43□□□□□ -2.8
CHKB-CPT1BH3BT56 RNU6-472P-201ENST00000384299 107 ntBASIC-2.43□□□□□ -2.8
CHKB-CPT1BH3BT56 AC009161.1-201ENST00000417306 376 ntBASIC-2.43□□□□□ -2.8
CHKB-CPT1BH3BT56 RPS3AP52-201ENST00000435639 297 ntBASIC-2.43□□□□□ -2.8
CHKB-CPT1BH3BT56 AL161932.1-201ENST00000437408 146 ntBASIC-2.43□□□□□ -2.8
CHKB-CPT1BH3BT56 Y_RNA.700-201ENST00000516806 100 ntBASIC-2.43□□□□□ -2.8
CHKB-CPT1BH3BT56 AC060788.1-201ENST00000521318 469 ntBASIC-2.43□□□□□ -2.8
CHKB-CPT1BH3BT56 AC018645.2-201ENST00000609151 472 ntBASIC-2.43□□□□□ -2.8
CHKB-CPT1BH3BT56 MIR3662-201ENST00000637030 95 ntBASIC-2.43□□□□□ -2.8
CHKB-CPT1BH3BT56 Y_RNA.473-201ENST00000384333 102 ntBASIC-2.44□□□□□ -2.8
CHKB-CPT1BH3BT56 Y_RNA.481-201ENST00000384373 102 ntBASIC-2.44□□□□□ -2.8
CHKB-CPT1BH3BT56 RNU6-1307P-201ENST00000391012 103 ntBASIC-2.44□□□□□ -2.8
CHKB-CPT1BH3BT56 Y_RNA.653-201ENST00000459091 95 ntBASIC-2.44□□□□□ -2.8
CHKB-CPT1BH3BT56 Y_RNA.655-201ENST00000515919 96 ntBASIC-2.44□□□□□ -2.8
CHKB-CPT1BH3BT56 SCARNA15-202ENST00000516881 127 ntBASIC-2.44□□□□□ -2.8
CHKB-CPT1BH3BT56 Y_RNA.303-201ENST00000364998 94 ntBASIC-2.45□□□□□ -2.8
CHKB-CPT1BH3BT56 Y_RNA.432-201ENST00000384087 111 ntBASIC-2.45□□□□□ -2.8
CHKB-CPT1BH3BT56 RNY1P6-201ENST00000384193 109 ntBASIC-2.45□□□□□ -2.8
CHKB-CPT1BH3BT56 Y_RNA.594-201ENST00000410373 140 ntBASIC-2.45□□□□□ -2.8
CHKB-CPT1BH3BT56 RNU6-1057P-201ENST00000517162 102 ntBASIC-2.45□□□□□ -2.8
CHKB-CPT1BH3BT56 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-2.45□□□□□ -2.8
CHKB-CPT1BH3BT56 AL365205.2-201ENST00000594586 68 ntBASIC-2.45□□□□□ -2.8
CHKB-CPT1BH3BT56 Y_RNA.380-201ENST00000365663 111 ntBASIC-2.46□□□□□ -2.8
CHKB-CPT1BH3BT56 Y_RNA.521-201ENST00000384560 114 ntBASIC-2.46□□□□□ -2.8
CHKB-CPT1BH3BT56 Y_RNA.531-201ENST00000384589 121 ntBASIC-2.46□□□□□ -2.8
CHKB-CPT1BH3BT56 MIR526A2-201ENST00000390198 65 ntBASIC-2.46□□□□□ -2.8
CHKB-CPT1BH3BT56 RNU6-1254P-201ENST00000391266 104 ntBASIC-2.46□□□□□ -2.8
CHKB-CPT1BH3BT56 RNU6-191P-201ENST00000516295 94 ntBASIC-2.46□□□□□ -2.8
CHKB-CPT1BH3BT56 RNU7-110P-201ENST00000516891 62 ntBASIC-2.46□□□□□ -2.8
CHKB-CPT1BH3BT56 AC040904.1-201ENST00000590850 223 ntBASIC-2.46□□□□□ -2.8
CHKB-CPT1BH3BT56 U6.92-201ENST00000636464 89 ntBASIC-2.46□□□□□ -2.8
CHKB-CPT1BH3BT56 RNU6-924P-201ENST00000362926 108 ntBASIC-2.47□□□□□ -2.8
CHKB-CPT1BH3BT56 RNU6-1290P-201ENST00000362957 109 ntBASIC-2.47□□□□□ -2.8
CHKB-CPT1BH3BT56 RNU6-553P-201ENST00000364047 96 ntBASIC-2.47□□□□□ -2.8
CHKB-CPT1BH3BT56 RNU6-99P-201ENST00000364721 107 ntBASIC-2.47□□□□□ -2.8
CHKB-CPT1BH3BT56 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-2.47□□□□□ -2.8
CHKB-CPT1BH3BT56 SNORD42B-201ENST00000458893 67 ntBASIC-2.47□□□□□ -2.8
CHKB-CPT1BH3BT56 RNU6-732P-201ENST00000516033 103 ntBASIC-2.47□□□□□ -2.8
CHKB-CPT1BH3BT56 RNU6-559P-201ENST00000516151 98 ntBASIC-2.47□□□□□ -2.8
CHKB-CPT1BH3BT56 RNU6-864P-201ENST00000516256 108 ntBASIC-2.47□□□□□ -2.8
CHKB-CPT1BH3BT56 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-2.47□□□□□ -2.8
CHKB-CPT1BH3BT56 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-2.47□□□□□ -2.8
CHKB-CPT1BH3BT56 RNU6-228P-201ENST00000362700 106 ntBASIC-2.48□□□□□ -2.81
CHKB-CPT1BH3BT56 RNU6-311P-201ENST00000516224 102 ntBASIC-2.48□□□□□ -2.81
CHKB-CPT1BH3BT56 RNU6-720P-201ENST00000516363 108 ntBASIC-2.48□□□□□ -2.81
CHKB-CPT1BH3BT56 RNU6-1088P-201ENST00000516850 104 ntBASIC-2.48□□□□□ -2.81
CHKB-CPT1BH3BT56 MIR5692C2-201ENST00000577959 77 ntBASIC-2.48□□□□□ -2.81
CHKB-CPT1BH3BT56 MIR5688-201ENST00000580619 83 ntBASIC-2.48□□□□□ -2.81
CHKB-CPT1BH3BT56 AC073114.1-201ENST00000612027 490 ntBASIC-2.48□□□□□ -2.81
CHKB-CPT1BH3BT56 MIR376B-201ENST00000614515 100 ntBASIC-2.48□□□□□ -2.81
CHKB-CPT1BH3BT56 AF246928.1-201ENST00000623768 87 ntBASIC-2.48□□□□□ -2.81
CHKB-CPT1BH3BT56 Y_RNA.55-201ENST00000362797 102 ntBASIC-2.49□□□□□ -2.81
CHKB-CPT1BH3BT56 Y_RNA.76-201ENST00000362931 109 ntBASIC-2.49□□□□□ -2.81
CHKB-CPT1BH3BT56 Y_RNA.162-201ENST00000363683 102 ntBASIC-2.49□□□□□ -2.81
CHKB-CPT1BH3BT56 Y_RNA.178-201ENST00000363832 102 ntBASIC-2.49□□□□□ -2.81
CHKB-CPT1BH3BT56 SNORD27-201ENST00000363981 72 ntBASIC-2.49□□□□□ -2.81
CHKB-CPT1BH3BT56 Y_RNA.413-201ENST00000384007 102 ntBASIC-2.49□□□□□ -2.81
CHKB-CPT1BH3BT56 Y_RNA.488-201ENST00000384403 102 ntBASIC-2.49□□□□□ -2.81
CHKB-CPT1BH3BT56 MIR487B-201ENST00000385021 84 ntBASIC-2.49□□□□□ -2.81
CHKB-CPT1BH3BT56 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-2.49□□□□□ -2.81
CHKB-CPT1BH3BT56 MIR548H3-201ENST00000408771 118 ntBASIC-2.49□□□□□ -2.81
CHKB-CPT1BH3BT56 RNU6-1050P-201ENST00000410388 107 ntBASIC-2.49□□□□□ -2.81
CHKB-CPT1BH3BT56 Y_RNA.754-201ENST00000476024 102 ntBASIC-2.49□□□□□ -2.81
CHKB-CPT1BH3BT56 Y_RNA.678-201ENST00000516408 96 ntBASIC-2.49□□□□□ -2.81
CHKB-CPT1BH3BT56 MIR4528-201ENST00000577763 90 ntBASIC-2.49□□□□□ -2.81
CHKB-CPT1BH3BT56 Y_RNA.790-201ENST00000614282 102 ntBASIC-2.49□□□□□ -2.81
CHKB-CPT1BH3BT56 Y_RNA.782-201ENST00000614695 102 ntBASIC-2.49□□□□□ -2.81
CHKB-CPT1BH3BT56 Y_RNA.145-201ENST00000363527 102 ntBASIC-2.5□□□□□ -2.81
CHKB-CPT1BH3BT56 RNU4-10P-201ENST00000364383 140 ntBASIC-2.5□□□□□ -2.81
CHKB-CPT1BH3BT56 Y_RNA.296-201ENST00000364930 108 ntBASIC-2.5□□□□□ -2.81
CHKB-CPT1BH3BT56 AL078595.1-201ENST00000404458 226 ntBASIC-2.5□□□□□ -2.81
CHKB-CPT1BH3BT56 Y_RNA.674-201ENST00000516362 113 ntBASIC-2.5□□□□□ -2.81
CHKB-CPT1BH3BT56 RNU6-1016P-201ENST00000516689 94 ntBASIC-2.5□□□□□ -2.81
CHKB-CPT1BH3BT56 RNU6-566P-201ENST00000516790 107 ntBASIC-2.5□□□□□ -2.81
CHKB-CPT1BH3BT56 Y_RNA.704-201ENST00000516851 102 ntBASIC-2.5□□□□□ -2.81
CHKB-CPT1BH3BT56 RNU6-273P-201ENST00000516937 96 ntBASIC-2.5□□□□□ -2.81
CHKB-CPT1BH3BT56 RNU2-4P-201ENST00000606190 192 ntBASIC-2.5□□□□□ -2.81
CHKB-CPT1BH3BT56 SNORD36A-201ENST00000362874 73 ntBASIC-2.51□□□□□ -2.81
CHKB-CPT1BH3BT56 Y_RNA.409-201ENST00000383990 98 ntBASIC-2.51□□□□□ -2.81
CHKB-CPT1BH3BT56 SNORD101-201ENST00000384027 73 ntBASIC-2.51□□□□□ -2.81
CHKB-CPT1BH3BT56 RNU6-1104P-201ENST00000384723 104 ntBASIC-2.51□□□□□ -2.81
CHKB-CPT1BH3BT56 RNU6-243P-201ENST00000391140 107 ntBASIC-2.51□□□□□ -2.81
CHKB-CPT1BH3BT56 AC019235.1-201ENST00000503847 207 ntBASIC-2.51□□□□□ -2.81
CHKB-CPT1BH3BT56 MTND2P31-201ENST00000512602 616 ntBASIC-2.51□□□□□ -2.81
CHKB-CPT1BH3BT56 RNU6-1129P-201ENST00000515964 104 ntBASIC-2.51□□□□□ -2.81
Retrieved 100 of 98,524 protein–RNA pairs in 298.3 ms