Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.66□□□□□ -2.52
RBFOX3A6NFN3 AC098479.1-201ENST00000609225 154 ntBASIC-0.66□□□□□ -2.52
RBFOX3A6NFN3 AL132765.2-201ENST00000610812 351 ntBASIC-0.66□□□□□ -2.52
RBFOX3A6NFN3 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.66□□□□□ -2.52
RBFOX3A6NFN3 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.67□□□□□ -2.52
RBFOX3A6NFN3 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.67□□□□□ -2.52
RBFOX3A6NFN3 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.67□□□□□ -2.52
RBFOX3A6NFN3 RNU6-449P-201ENST00000383914 107 ntBASIC-0.67□□□□□ -2.52
RBFOX3A6NFN3 RNU4-63P-201ENST00000411313 118 ntBASIC-0.67□□□□□ -2.52
RBFOX3A6NFN3 RNU6-175P-201ENST00000516896 107 ntBASIC-0.67□□□□□ -2.52
RBFOX3A6NFN3 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.67□□□□□ -2.52
RBFOX3A6NFN3 MIR3920-201ENST00000581751 86 ntBASIC-0.67□□□□□ -2.52
RBFOX3A6NFN3 AC093726.3-201ENST00000637588 150 ntBASIC-0.67□□□□□ -2.52
RBFOX3A6NFN3 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.68□□□□□ -2.52
RBFOX3A6NFN3 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.68□□□□□ -2.52
RBFOX3A6NFN3 RNU1-141P-201ENST00000364623 158 ntBASIC-0.68□□□□□ -2.52
RBFOX3A6NFN3 SNORD114-15-201ENST00000364687 72 ntBASIC-0.68□□□□□ -2.52
RBFOX3A6NFN3 RNU6-47P-201ENST00000383866 107 ntBASIC-0.68□□□□□ -2.52
RBFOX3A6NFN3 RNU6-211P-201ENST00000384047 107 ntBASIC-0.68□□□□□ -2.52
RBFOX3A6NFN3 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.68□□□□□ -2.52
RBFOX3A6NFN3 MIR181B2-201ENST00000385004 89 ntBASIC-0.68□□□□□ -2.52
RBFOX3A6NFN3 MT-TT-201ENST00000387460 66 ntBASIC-0.68□□□□□ -2.52
RBFOX3A6NFN3 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.68□□□□□ -2.52
RBFOX3A6NFN3 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-0.68□□□□□ -2.52
RBFOX3A6NFN3 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.68□□□□□ -2.52
RBFOX3A6NFN3 HAR1A.1-201ENST00000459583 118 ntBASIC-0.68□□□□□ -2.52
RBFOX3A6NFN3 AC074198.2-201ENST00000508153 258 ntBASIC-0.68□□□□□ -2.52
RBFOX3A6NFN3 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.68□□□□□ -2.52
RBFOX3A6NFN3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.68□□□□□ -2.52
RBFOX3A6NFN3 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.68□□□□□ -2.52
RBFOX3A6NFN3 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.68□□□□□ -2.52
RBFOX3A6NFN3 RNU7-10P-201ENST00000607194 63 ntBASIC-0.68□□□□□ -2.52
RBFOX3A6NFN3 Y_RNA.248-201ENST00000364501 109 ntBASIC-0.69□□□□□ -2.52
RBFOX3A6NFN3 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.69□□□□□ -2.52
RBFOX3A6NFN3 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.69□□□□□ -2.52
RBFOX3A6NFN3 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.69□□□□□ -2.52
RBFOX3A6NFN3 MIR9-2-201ENST00000384838 87 ntBASIC-0.69□□□□□ -2.52
RBFOX3A6NFN3 MIR616-201ENST00000385293 97 ntBASIC-0.69□□□□□ -2.52
RBFOX3A6NFN3 AL606845.1-201ENST00000404881 255 ntBASIC-0.69□□□□□ -2.52
RBFOX3A6NFN3 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.69□□□□□ -2.52
RBFOX3A6NFN3 AL445193.1-201ENST00000441183 141 ntBASIC-0.69□□□□□ -2.52
RBFOX3A6NFN3 RNU7-137P-201ENST00000516788 62 ntBASIC-0.69□□□□□ -2.52
RBFOX3A6NFN3 RNU6-570P-201ENST00000517051 105 ntBASIC-0.69□□□□□ -2.52
RBFOX3A6NFN3 AL359881.1-201ENST00000602916 267 ntBASIC-0.69□□□□□ -2.52
RBFOX3A6NFN3 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.7□□□□□ -2.52
RBFOX3A6NFN3 MIR539-201ENST00000365690 78 ntBASIC-0.7□□□□□ -2.52
RBFOX3A6NFN3 MIR635-201ENST00000384830 98 ntBASIC-0.7□□□□□ -2.52
RBFOX3A6NFN3 AL603914.1-201ENST00000401964 204 ntBASIC-0.7□□□□□ -2.52
RBFOX3A6NFN3 RNU6-121P-201ENST00000410525 99 ntBASIC-0.7□□□□□ -2.52
RBFOX3A6NFN3 AC097635.1-201ENST00000450678 155 ntBASIC-0.7□□□□□ -2.52
RBFOX3A6NFN3 SNORD67.1-201ENST00000516618 108 ntBASIC-0.7□□□□□ -2.52
RBFOX3A6NFN3 MIR548AE1-201ENST00000583292 70 ntBASIC-0.7□□□□□ -2.52
RBFOX3A6NFN3 uc_338.10-201ENST00000621872 182 ntBASIC-0.7□□□□□ -2.52
RBFOX3A6NFN3 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.71□□□□□ -2.52
RBFOX3A6NFN3 SNORA32-201ENST00000384072 121 ntBASIC-0.71□□□□□ -2.52
RBFOX3A6NFN3 RNU6-429P-201ENST00000384582 108 ntBASIC-0.71□□□□□ -2.52
RBFOX3A6NFN3 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.71□□□□□ -2.52
RBFOX3A6NFN3 RNU7-13P-201ENST00000516413 62 ntBASIC-0.71□□□□□ -2.52
RBFOX3A6NFN3 SCARNA15-202ENST00000516881 127 ntBASIC-0.71□□□□□ -2.52
RBFOX3A6NFN3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.71□□□□□ -2.52
RBFOX3A6NFN3 YWHAEP2-201ENST00000580066 112 ntBASIC-0.71□□□□□ -2.52
RBFOX3A6NFN3 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.72□□□□□ -2.52
RBFOX3A6NFN3 SNORD114-29-201ENST00000364819 70 ntBASIC-0.72□□□□□ -2.52
RBFOX3A6NFN3 SNORD56B-201ENST00000384713 71 ntBASIC-0.72□□□□□ -2.52
RBFOX3A6NFN3 RNY1P7-201ENST00000384743 110 ntBASIC-0.72□□□□□ -2.52
RBFOX3A6NFN3 MIR204-201ENST00000385200 110 ntBASIC-0.72□□□□□ -2.52
RBFOX3A6NFN3 AC138393.2-201ENST00000414742 246 ntBASIC-0.72□□□□□ -2.52
RBFOX3A6NFN3 FGF7P4-201ENST00000509595 295 ntBASIC-0.72□□□□□ -2.52
RBFOX3A6NFN3 RNU6-881P-201ENST00000516813 102 ntBASIC-0.72□□□□□ -2.52
RBFOX3A6NFN3 MTND5P40-201ENST00000559945 246 ntBASIC-0.72□□□□□ -2.52
RBFOX3A6NFN3 MIR548AG2-201ENST00000581228 64 ntBASIC-0.72□□□□□ -2.52
RBFOX3A6NFN3 AC006504.6-201ENST00000590142 199 ntBASIC-0.72□□□□□ -2.52
RBFOX3A6NFN3 U6atac.1-201ENST00000616025 117 ntBASIC-0.72□□□□□ -2.52
RBFOX3A6NFN3 SNORD115-2-201ENST00000362842 82 ntBASIC-0.73□□□□□ -2.53
RBFOX3A6NFN3 RNU4-36P-201ENST00000364294 144 ntBASIC-0.73□□□□□ -2.53
RBFOX3A6NFN3 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.73□□□□□ -2.53
RBFOX3A6NFN3 SNORD115-20-201ENST00000365099 82 ntBASIC-0.73□□□□□ -2.53
RBFOX3A6NFN3 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.73□□□□□ -2.53
RBFOX3A6NFN3 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.73□□□□□ -2.53
RBFOX3A6NFN3 RNA5SP144-201ENST00000410846 116 ntBASIC-0.73□□□□□ -2.53
RBFOX3A6NFN3 RNU7-74P-201ENST00000459104 62 ntBASIC-0.73□□□□□ -2.53
RBFOX3A6NFN3 AC021146.6-201ENST00000514659 117 ntBASIC-0.73□□□□□ -2.53
RBFOX3A6NFN3 RNU6-138P-201ENST00000515952 107 ntBASIC-0.73□□□□□ -2.53
RBFOX3A6NFN3 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.73□□□□□ -2.53
RBFOX3A6NFN3 AC069503.3-201ENST00000618674 145 ntBASIC-0.73□□□□□ -2.53
RBFOX3A6NFN3 SNORD114-10-201ENST00000363409 72 ntBASIC-0.74□□□□□ -2.53
RBFOX3A6NFN3 Y_RNA.197-201ENST00000364004 102 ntBASIC-0.74□□□□□ -2.53
RBFOX3A6NFN3 RNU6-154P-201ENST00000384306 106 ntBASIC-0.74□□□□□ -2.53
RBFOX3A6NFN3 MIR519E-201ENST00000385075 84 ntBASIC-0.74□□□□□ -2.53
RBFOX3A6NFN3 MT-TQ-201ENST00000387372 72 ntBASIC-0.74□□□□□ -2.53
RBFOX3A6NFN3 MIR196A1-201ENST00000388006 70 ntBASIC-0.74□□□□□ -2.53
RBFOX3A6NFN3 SNORA79-201ENST00000408376 140 ntBASIC-0.74□□□□□ -2.53
RBFOX3A6NFN3 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.74□□□□□ -2.53
RBFOX3A6NFN3 AC093423.1-201ENST00000440817 142 ntBASIC-0.74□□□□□ -2.53
RBFOX3A6NFN3 RNU7-195P-201ENST00000458793 62 ntBASIC-0.74□□□□□ -2.53
RBFOX3A6NFN3 SNORD38.3-201ENST00000516599 73 ntBASIC-0.74□□□□□ -2.53
RBFOX3A6NFN3 RNA5SP33-201ENST00000516687 98 ntBASIC-0.74□□□□□ -2.53
RBFOX3A6NFN3 RNU6-453P-201ENST00000516819 85 ntBASIC-0.74□□□□□ -2.53
RBFOX3A6NFN3 MIR4500-201ENST00000579472 76 ntBASIC-0.74□□□□□ -2.53
RBFOX3A6NFN3 MIR4280-201ENST00000582178 76 ntBASIC-0.74□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 212.6 ms