Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC008267.6-201ENST00000441664 139 ntBASIC0.9□□□□□ -2.27
TCRBV7S3A2A0A539 RNU7-6P-201ENST00000516845 62 ntBASIC0.9□□□□□ -2.27
TCRBV7S3A2A0A539 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.9□□□□□ -2.27
TCRBV7S3A2A0A539 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.9□□□□□ -2.27
TCRBV7S3A2A0A539 U6.95-201ENST00000636931 70 ntBASIC0.9□□□□□ -2.27
TCRBV7S3A2A0A539 RNY4P6-201ENST00000363667 96 ntBASIC0.89□□□□□ -2.27
TCRBV7S3A2A0A539 RNU6-1335P-201ENST00000365426 107 ntBASIC0.89□□□□□ -2.27
TCRBV7S3A2A0A539 RNU6-1117P-201ENST00000384525 104 ntBASIC0.89□□□□□ -2.27
TCRBV7S3A2A0A539 RNU6-447P-201ENST00000410293 104 ntBASIC0.89□□□□□ -2.27
TCRBV7S3A2A0A539 RNU6-1118P-201ENST00000410382 104 ntBASIC0.89□□□□□ -2.27
TCRBV7S3A2A0A539 RNU6-1076P-201ENST00000410397 104 ntBASIC0.89□□□□□ -2.27
TCRBV7S3A2A0A539 RNU6-355P-201ENST00000410427 104 ntBASIC0.89□□□□□ -2.27
TCRBV7S3A2A0A539 RNU6-791P-201ENST00000410467 104 ntBASIC0.89□□□□□ -2.27
TCRBV7S3A2A0A539 RNU6-705P-201ENST00000410601 104 ntBASIC0.89□□□□□ -2.27
TCRBV7S3A2A0A539 RNU6-735P-201ENST00000410612 107 ntBASIC0.89□□□□□ -2.27
TCRBV7S3A2A0A539 RNU6-1100P-201ENST00000410691 104 ntBASIC0.89□□□□□ -2.27
TCRBV7S3A2A0A539 RNU6-860P-201ENST00000410860 104 ntBASIC0.89□□□□□ -2.27
TCRBV7S3A2A0A539 RNU4-61P-201ENST00000411243 107 ntBASIC0.89□□□□□ -2.27
TCRBV7S3A2A0A539 RNU6-1217P-201ENST00000411276 104 ntBASIC0.89□□□□□ -2.27
TCRBV7S3A2A0A539 RNU6-785P-201ENST00000411324 104 ntBASIC0.89□□□□□ -2.27
TCRBV7S3A2A0A539 RNU6-1333P-201ENST00000516162 93 ntBASIC0.89□□□□□ -2.27
TCRBV7S3A2A0A539 RNU7-156P-201ENST00000517214 74 ntBASIC0.89□□□□□ -2.27
TCRBV7S3A2A0A539 MIR4698-201ENST00000577795 80 ntBASIC0.89□□□□□ -2.27
TCRBV7S3A2A0A539 MIR4491-201ENST00000581087 68 ntBASIC0.89□□□□□ -2.27
TCRBV7S3A2A0A539 U6.90-201ENST00000614007 104 ntBASIC0.89□□□□□ -2.27
TCRBV7S3A2A0A539 U6.70-201ENST00000620287 104 ntBASIC0.89□□□□□ -2.27
TCRBV7S3A2A0A539 SNORD114-27-201ENST00000363766 70 ntBASIC0.88□□□□□ -2.27
TCRBV7S3A2A0A539 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
TCRBV7S3A2A0A539 MIR520F-201ENST00000384824 87 ntBASIC0.88□□□□□ -2.27
TCRBV7S3A2A0A539 MIR548D2-201ENST00000384955 97 ntBASIC0.88□□□□□ -2.27
TCRBV7S3A2A0A539 RNU4-83P-201ENST00000410863 133 ntBASIC0.88□□□□□ -2.27
TCRBV7S3A2A0A539 MIR4298-201ENST00000584380 73 ntBASIC0.88□□□□□ -2.27
TCRBV7S3A2A0A539 AL359821.1-201ENST00000605519 182 ntBASIC0.88□□□□□ -2.27
TCRBV7S3A2A0A539 snoU13.31-201ENST00000607291 104 ntBASIC0.88□□□□□ -2.27
TCRBV7S3A2A0A539 MIR8066-201ENST00000617280 78 ntBASIC0.88□□□□□ -2.27
TCRBV7S3A2A0A539 AL589743.1-201ENST00000551932 2712 ntBASIC0.88□□□□□ -2.27
TCRBV7S3A2A0A539 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
TCRBV7S3A2A0A539 RNU6-616P-201ENST00000384353 107 ntBASIC0.87□□□□□ -2.27
TCRBV7S3A2A0A539 RNU6-22P-201ENST00000384355 107 ntBASIC0.87□□□□□ -2.27
TCRBV7S3A2A0A539 MIR206-201ENST00000384872 86 ntBASIC0.87□□□□□ -2.27
TCRBV7S3A2A0A539 MIR532-201ENST00000385025 91 ntBASIC0.87□□□□□ -2.27
TCRBV7S3A2A0A539 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
TCRBV7S3A2A0A539 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.87□□□□□ -2.27
TCRBV7S3A2A0A539 MIR3973-201ENST00000579824 107 ntBASIC0.87□□□□□ -2.27
TCRBV7S3A2A0A539 MIR4769-201ENST00000584126 77 ntBASIC0.87□□□□□ -2.27
TCRBV7S3A2A0A539 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.87□□□□□ -2.27
TCRBV7S3A2A0A539 Y_RNA.42-201ENST00000362660 108 ntBASIC0.86□□□□□ -2.27
TCRBV7S3A2A0A539 SNORD115-35-201ENST00000365122 82 ntBASIC0.86□□□□□ -2.27
TCRBV7S3A2A0A539 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
TCRBV7S3A2A0A539 RNU6-364P-201ENST00000384387 107 ntBASIC0.86□□□□□ -2.27
TCRBV7S3A2A0A539 RNU6-1168P-201ENST00000390831 104 ntBASIC0.86□□□□□ -2.27
TCRBV7S3A2A0A539 RNU1-119P-201ENST00000391122 165 ntBASIC0.86□□□□□ -2.27
TCRBV7S3A2A0A539 RNU7-2P-201ENST00000516096 62 ntBASIC0.86□□□□□ -2.27
TCRBV7S3A2A0A539 RNU6-62P-201ENST00000516526 102 ntBASIC0.86□□□□□ -2.27
TCRBV7S3A2A0A539 RNU6-765P-201ENST00000516916 99 ntBASIC0.86□□□□□ -2.27
TCRBV7S3A2A0A539 MIR4679-2-201ENST00000578358 77 ntBASIC0.86□□□□□ -2.27
TCRBV7S3A2A0A539 AL353765.1-201ENST00000605514 183 ntBASIC0.86□□□□□ -2.27
TCRBV7S3A2A0A539 AL365222.1-201ENST00000614661 98 ntBASIC0.86□□□□□ -2.27
TCRBV7S3A2A0A539 RNU6-1187P-201ENST00000364771 110 ntBASIC0.85□□□□□ -2.27
TCRBV7S3A2A0A539 RNY1P2-201ENST00000364820 117 ntBASIC0.85□□□□□ -2.27
TCRBV7S3A2A0A539 RNU6-392P-201ENST00000364926 101 ntBASIC0.85□□□□□ -2.27
TCRBV7S3A2A0A539 Y_RNA.353-201ENST00000365440 108 ntBASIC0.85□□□□□ -2.27
TCRBV7S3A2A0A539 RNU7-102P-201ENST00000458948 62 ntBASIC0.85□□□□□ -2.27
TCRBV7S3A2A0A539 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.85□□□□□ -2.27
TCRBV7S3A2A0A539 RNU6-1194P-201ENST00000516208 104 ntBASIC0.85□□□□□ -2.27
TCRBV7S3A2A0A539 RNU6-479P-201ENST00000516348 105 ntBASIC0.85□□□□□ -2.27
TCRBV7S3A2A0A539 AC133485.1-201ENST00000567176 124 ntBASIC0.85□□□□□ -2.27
TCRBV7S3A2A0A539 AC090897.1-201ENST00000580909 226 ntBASIC0.85□□□□□ -2.27
TCRBV7S3A2A0A539 Y_RNA.773-201ENST00000607168 90 ntBASIC0.85□□□□□ -2.27
TCRBV7S3A2A0A539 MIR6082-201ENST00000613604 109 ntBASIC0.85□□□□□ -2.27
TCRBV7S3A2A0A539 MIR6767-201ENST00000637302 66 ntBASIC0.85□□□□□ -2.27
TCRBV7S3A2A0A539 SNORD114-2-201ENST00000363953 78 ntBASIC0.84□□□□□ -2.27
TCRBV7S3A2A0A539 Y_RNA.261-201ENST00000364631 102 ntBASIC0.84□□□□□ -2.27
TCRBV7S3A2A0A539 MIR608-201ENST00000384820 100 ntBASIC0.84□□□□□ -2.27
TCRBV7S3A2A0A539 MIR520H-201ENST00000385126 88 ntBASIC0.84□□□□□ -2.27
TCRBV7S3A2A0A539 RNU6-1321P-201ENST00000390905 107 ntBASIC0.84□□□□□ -2.27
TCRBV7S3A2A0A539 RNU6-351P-201ENST00000516097 100 ntBASIC0.84□□□□□ -2.27
TCRBV7S3A2A0A539 RNA5SP458-201ENST00000516188 119 ntBASIC0.84□□□□□ -2.27
TCRBV7S3A2A0A539 AC138749.4-201ENST00000563970 127 ntBASIC0.84□□□□□ -2.27
TCRBV7S3A2A0A539 AC104984.5-201ENST00000586878 94 ntBASIC0.84□□□□□ -2.27
TCRBV7S3A2A0A539 AC008608.1-201ENST00000603910 127 ntBASIC0.84□□□□□ -2.27
TCRBV7S3A2A0A539 Y_RNA.13-201ENST00000362403 112 ntBASIC0.83□□□□□ -2.28
TCRBV7S3A2A0A539 RNU6-403P-201ENST00000363163 104 ntBASIC0.83□□□□□ -2.28
TCRBV7S3A2A0A539 RNA5SP205-201ENST00000364653 136 ntBASIC0.83□□□□□ -2.28
TCRBV7S3A2A0A539 Y_RNA.344-201ENST00000365381 112 ntBASIC0.83□□□□□ -2.28
TCRBV7S3A2A0A539 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.83□□□□□ -2.28
TCRBV7S3A2A0A539 SNORD99-201ENST00000408612 74 ntBASIC0.83□□□□□ -2.28
TCRBV7S3A2A0A539 Y_RNA.649-201ENST00000459077 103 ntBASIC0.83□□□□□ -2.28
TCRBV7S3A2A0A539 SNORD33.1-201ENST00000516213 88 ntBASIC0.83□□□□□ -2.28
TCRBV7S3A2A0A539 AP003327.1-201ENST00000529684 127 ntBASIC0.83□□□□□ -2.28
TCRBV7S3A2A0A539 AC105081.1-201ENST00000617727 106 ntBASIC0.83□□□□□ -2.28
TCRBV7S3A2A0A539 MIR373-201ENST00000362273 69 ntBASIC0.82□□□□□ -2.28
TCRBV7S3A2A0A539 Y_RNA.98-201ENST00000363109 102 ntBASIC0.82□□□□□ -2.28
TCRBV7S3A2A0A539 RNA5SP133-201ENST00000363368 119 ntBASIC0.82□□□□□ -2.28
TCRBV7S3A2A0A539 Y_RNA.448-201ENST00000384185 108 ntBASIC0.82□□□□□ -2.28
TCRBV7S3A2A0A539 MIR573-201ENST00000384964 99 ntBASIC0.82□□□□□ -2.28
TCRBV7S3A2A0A539 AC244098.3-201ENST00000424803 96 ntBASIC0.82□□□□□ -2.28
TCRBV7S3A2A0A539 RNU7-48P-201ENST00000458875 63 ntBASIC0.82□□□□□ -2.28
TCRBV7S3A2A0A539 RPL39P34-201ENST00000477141 156 ntBASIC0.82□□□□□ -2.28
TCRBV7S3A2A0A539 AL670379.3-201ENST00000605040 251 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 220.3 ms