Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
CCDC187A0A096LP49 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CCDC187A0A096LP49 Y_RNA.95-201ENST00000363079 95 ntBASIC1.51□□□□□ -2.17
CCDC187A0A096LP49 RNU6-219P-201ENST00000364728 107 ntBASIC1.51□□□□□ -2.17
CCDC187A0A096LP49 RNU6-787P-201ENST00000384032 107 ntBASIC1.51□□□□□ -2.17
CCDC187A0A096LP49 RNU6-1067P-201ENST00000384752 107 ntBASIC1.51□□□□□ -2.17
CCDC187A0A096LP49 MIR520C-201ENST00000385005 87 ntBASIC1.51□□□□□ -2.17
CCDC187A0A096LP49 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.51□□□□□ -2.17
CCDC187A0A096LP49 UBL5P1-201ENST00000507979 193 ntBASIC1.51□□□□□ -2.17
CCDC187A0A096LP49 RNU6-162P-201ENST00000516228 103 ntBASIC1.51□□□□□ -2.17
CCDC187A0A096LP49 RNU6-521P-201ENST00000516663 105 ntBASIC1.51□□□□□ -2.17
CCDC187A0A096LP49 RNA5SP33-201ENST00000516687 98 ntBASIC1.51□□□□□ -2.17
CCDC187A0A096LP49 RNU7-53P-201ENST00000516705 60 ntBASIC1.51□□□□□ -2.17
CCDC187A0A096LP49 MIR8055-201ENST00000610739 97 ntBASIC1.51□□□□□ -2.17
CCDC187A0A096LP49 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.51□□□□□ -2.17
CCDC187A0A096LP49 Y_RNA.73-201ENST00000362910 113 ntBASIC1.5□□□□□ -2.17
CCDC187A0A096LP49 Y_RNA.118-201ENST00000363300 101 ntBASIC1.5□□□□□ -2.17
CCDC187A0A096LP49 SNORA7.1-201ENST00000363750 139 ntBASIC1.5□□□□□ -2.17
CCDC187A0A096LP49 Y_RNA.190-201ENST00000363964 101 ntBASIC1.5□□□□□ -2.17
CCDC187A0A096LP49 Y_RNA.247-201ENST00000364500 92 ntBASIC1.5□□□□□ -2.17
CCDC187A0A096LP49 RNU6-392P-201ENST00000364926 101 ntBASIC1.5□□□□□ -2.17
CCDC187A0A096LP49 Y_RNA.467-201ENST00000384297 102 ntBASIC1.5□□□□□ -2.17
CCDC187A0A096LP49 RNU6-1307P-201ENST00000391012 103 ntBASIC1.5□□□□□ -2.17
CCDC187A0A096LP49 RPS27P16-201ENST00000425758 201 ntBASIC1.5□□□□□ -2.17
CCDC187A0A096LP49 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.5□□□□□ -2.17
CCDC187A0A096LP49 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.5□□□□□ -2.17
CCDC187A0A096LP49 AC022137.1-201ENST00000483735 151 ntBASIC1.5□□□□□ -2.17
CCDC187A0A096LP49 SNORD111.1-201ENST00000516421 86 ntBASIC1.5□□□□□ -2.17
CCDC187A0A096LP49 RNU6-958P-201ENST00000516995 106 ntBASIC1.5□□□□□ -2.17
CCDC187A0A096LP49 RNU1-92P-201ENST00000517017 135 ntBASIC1.5□□□□□ -2.17
CCDC187A0A096LP49 MIR3664-201ENST00000579074 99 ntBASIC1.5□□□□□ -2.17
CCDC187A0A096LP49 MIR4764-201ENST00000580680 88 ntBASIC1.5□□□□□ -2.17
CCDC187A0A096LP49 MIR4791-201ENST00000607666 84 ntBASIC1.5□□□□□ -2.17
CCDC187A0A096LP49 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.5□□□□□ -2.17
CCDC187A0A096LP49 AC025521.1-201ENST00000621624 286 ntBASIC1.5□□□□□ -2.17
CCDC187A0A096LP49 ZNF209P-201ENST00000593450 2304 ntBASIC1.49□□□□□ -2.17
CCDC187A0A096LP49 SNORD45B-201ENST00000364617 72 ntBASIC1.49□□□□□ -2.17
CCDC187A0A096LP49 SNORA70.7-201ENST00000384159 133 ntBASIC1.49□□□□□ -2.17
CCDC187A0A096LP49 MRPL35P3-201ENST00000421557 364 ntBASIC1.49□□□□□ -2.17
CCDC187A0A096LP49 SNORA31.24-201ENST00000517232 57 ntBASIC1.49□□□□□ -2.17
CCDC187A0A096LP49 AL512310.8-201ENST00000550183 120 ntBASIC1.49□□□□□ -2.17
CCDC187A0A096LP49 MIR3152-201ENST00000579801 74 ntBASIC1.49□□□□□ -2.17
CCDC187A0A096LP49 AC243994.1-201ENST00000618627 109 ntBASIC1.49□□□□□ -2.17
CCDC187A0A096LP49 MIR8065-201ENST00000620577 100 ntBASIC1.49□□□□□ -2.17
CCDC187A0A096LP49 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
CCDC187A0A096LP49 RNU6-979P-201ENST00000383896 107 ntBASIC1.48□□□□□ -2.17
CCDC187A0A096LP49 SNORA18-201ENST00000384416 132 ntBASIC1.48□□□□□ -2.17
CCDC187A0A096LP49 RNU6-342P-201ENST00000384521 104 ntBASIC1.48□□□□□ -2.17
CCDC187A0A096LP49 Y_RNA.537-201ENST00000384626 109 ntBASIC1.48□□□□□ -2.17
CCDC187A0A096LP49 MIR518E-201ENST00000385252 88 ntBASIC1.48□□□□□ -2.17
CCDC187A0A096LP49 AC090844.1-201ENST00000422019 156 ntBASIC1.48□□□□□ -2.17
CCDC187A0A096LP49 HMGN1P33-201ENST00000432945 451 ntBASIC1.48□□□□□ -2.17
CCDC187A0A096LP49 RPL39P39-201ENST00000455840 151 ntBASIC1.48□□□□□ -2.17
CCDC187A0A096LP49 RNU7-67P-201ENST00000459003 62 ntBASIC1.48□□□□□ -2.17
CCDC187A0A096LP49 SNORA1.1-201ENST00000364671 133 ntBASIC1.47□□□□□ -2.17
CCDC187A0A096LP49 Y_RNA.355-201ENST00000365462 98 ntBASIC1.47□□□□□ -2.17
CCDC187A0A096LP49 RNU6-1124P-201ENST00000384169 107 ntBASIC1.47□□□□□ -2.17
CCDC187A0A096LP49 RNU6-997P-201ENST00000384725 107 ntBASIC1.47□□□□□ -2.17
CCDC187A0A096LP49 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
CCDC187A0A096LP49 SNORD77B-201ENST00000391112 67 ntBASIC1.47□□□□□ -2.17
CCDC187A0A096LP49 RNA5SP261-201ENST00000410536 106 ntBASIC1.47□□□□□ -2.17
CCDC187A0A096LP49 RNU6-887P-201ENST00000410660 100 ntBASIC1.47□□□□□ -2.17
CCDC187A0A096LP49 RNU6-402P-201ENST00000410678 103 ntBASIC1.47□□□□□ -2.17
CCDC187A0A096LP49 RNA5SP225-201ENST00000410874 135 ntBASIC1.47□□□□□ -2.17
CCDC187A0A096LP49 Y_RNA.620-201ENST00000411009 88 ntBASIC1.47□□□□□ -2.17
CCDC187A0A096LP49 AC109327.2-201ENST00000448339 378 ntBASIC1.47□□□□□ -2.17
CCDC187A0A096LP49 RNU6-267P-201ENST00000516714 103 ntBASIC1.47□□□□□ -2.17
CCDC187A0A096LP49 Y_RNA.705-201ENST00000516862 110 ntBASIC1.47□□□□□ -2.17
CCDC187A0A096LP49 RNU7-35P-201ENST00000517174 62 ntBASIC1.47□□□□□ -2.17
CCDC187A0A096LP49 MIR4421-201ENST00000578133 69 ntBASIC1.47□□□□□ -2.17
CCDC187A0A096LP49 MIR4439-201ENST00000583746 80 ntBASIC1.47□□□□□ -2.17
CCDC187A0A096LP49 SEPT14P17-201ENST00000617978 177 ntBASIC1.47□□□□□ -2.17
CCDC187A0A096LP49 AC008133.2-201ENST00000624540 351 ntBASIC1.47□□□□□ -2.17
CCDC187A0A096LP49 Z97988.1-201ENST00000637697 135 ntBASIC1.47□□□□□ -2.17
CCDC187A0A096LP49 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.47□□□□□ -2.17
CCDC187A0A096LP49 RNY1P1-201ENST00000364372 112 ntBASIC1.46□□□□□ -2.18
CCDC187A0A096LP49 RNU6-1163P-201ENST00000364516 107 ntBASIC1.46□□□□□ -2.18
CCDC187A0A096LP49 RNA5SP363-201ENST00000365072 115 ntBASIC1.46□□□□□ -2.18
CCDC187A0A096LP49 SNORA32-201ENST00000384072 121 ntBASIC1.46□□□□□ -2.18
CCDC187A0A096LP49 MIR206-201ENST00000384872 86 ntBASIC1.46□□□□□ -2.18
CCDC187A0A096LP49 MIR1323-201ENST00000408090 73 ntBASIC1.46□□□□□ -2.18
CCDC187A0A096LP49 RNU7-2P-201ENST00000516096 62 ntBASIC1.46□□□□□ -2.18
CCDC187A0A096LP49 MIR5588-201ENST00000581890 63 ntBASIC1.46□□□□□ -2.18
CCDC187A0A096LP49 MIR376B-201ENST00000614515 100 ntBASIC1.46□□□□□ -2.18
CCDC187A0A096LP49 AL157834.3-201ENST00000615543 103 ntBASIC1.46□□□□□ -2.18
CCDC187A0A096LP49 MIR3202-2-201ENST00000635980 79 ntBASIC1.46□□□□□ -2.18
CCDC187A0A096LP49 RNU6-1276P-201ENST00000365372 104 ntBASIC1.45□□□□□ -2.18
CCDC187A0A096LP49 SNORD58A-201ENST00000383875 65 ntBASIC1.45□□□□□ -2.18
CCDC187A0A096LP49 RNU6-972P-201ENST00000391208 107 ntBASIC1.45□□□□□ -2.18
CCDC187A0A096LP49 MIR1255A-201ENST00000408338 113 ntBASIC1.45□□□□□ -2.18
CCDC187A0A096LP49 snoU13.16-201ENST00000459350 104 ntBASIC1.45□□□□□ -2.18
CCDC187A0A096LP49 RNU7-171P-201ENST00000459581 62 ntBASIC1.45□□□□□ -2.18
CCDC187A0A096LP49 Y_RNA.659-201ENST00000515994 113 ntBASIC1.45□□□□□ -2.18
CCDC187A0A096LP49 RNU6-947P-201ENST00000516264 106 ntBASIC1.45□□□□□ -2.18
CCDC187A0A096LP49 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.45□□□□□ -2.18
CCDC187A0A096LP49 AL096861.1-201ENST00000610899 123 ntBASIC1.45□□□□□ -2.18
CCDC187A0A096LP49 Y_RNA.96-201ENST00000363092 109 ntBASIC1.44□□□□□ -2.18
CCDC187A0A096LP49 RNA5SP48-201ENST00000363969 126 ntBASIC1.44□□□□□ -2.18
CCDC187A0A096LP49 SNORD116-22-201ENST00000384430 92 ntBASIC1.44□□□□□ -2.18
CCDC187A0A096LP49 RNU6-813P-201ENST00000384691 107 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 189 ms