Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 MIR6086-201ENST00000638065 55 ntBASIC1.31□□□□□ -2.2
NOTCH3Q9UM47 SNORA7.1-201ENST00000363750 139 ntBASIC1.31□□□□□ -2.2
NOTCH3Q9UM47 AC245047.7-201ENST00000440265 293 ntBASIC1.31□□□□□ -2.2
NOTCH3Q9UM47 AC087499.7-201ENST00000441958 109 ntBASIC1.31□□□□□ -2.2
NOTCH3Q9UM47 RPS29P12-201ENST00000460178 152 ntBASIC1.31□□□□□ -2.2
NOTCH3Q9UM47 RNU6-1015P-201ENST00000517121 99 ntBASIC1.31□□□□□ -2.2
NOTCH3Q9UM47 MIR151B-201ENST00000584249 96 ntBASIC1.31□□□□□ -2.2
NOTCH3Q9UM47 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.31□□□□□ -2.2
NOTCH3Q9UM47 U7.4-201ENST00000614961 63 ntBASIC1.31□□□□□ -2.2
NOTCH3Q9UM47 RNU1-58P-201ENST00000362413 163 ntBASIC1.3□□□□□ -2.2
NOTCH3Q9UM47 SNORD114-10-201ENST00000363409 72 ntBASIC1.3□□□□□ -2.2
NOTCH3Q9UM47 Y_RNA.545-201ENST00000384652 105 ntBASIC1.3□□□□□ -2.2
NOTCH3Q9UM47 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
NOTCH3Q9UM47 AL353813.1-201ENST00000440700 253 ntBASIC1.3□□□□□ -2.2
NOTCH3Q9UM47 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.3□□□□□ -2.2
NOTCH3Q9UM47 RNU6-1116P-201ENST00000517269 99 ntBASIC1.3□□□□□ -2.2
NOTCH3Q9UM47 MIR4474-201ENST00000579189 78 ntBASIC1.3□□□□□ -2.2
NOTCH3Q9UM47 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
NOTCH3Q9UM47 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
NOTCH3Q9UM47 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
NOTCH3Q9UM47 RNU6-315P-201ENST00000362666 107 ntBASIC1.29□□□□□ -2.2
NOTCH3Q9UM47 RNA5SP457-201ENST00000363657 124 ntBASIC1.29□□□□□ -2.2
NOTCH3Q9UM47 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
NOTCH3Q9UM47 MIR1262-201ENST00000408276 93 ntBASIC1.29□□□□□ -2.2
NOTCH3Q9UM47 RNU7-28P-201ENST00000516759 62 ntBASIC1.29□□□□□ -2.2
NOTCH3Q9UM47 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.29□□□□□ -2.2
NOTCH3Q9UM47 AC105081.1-201ENST00000617727 106 ntBASIC1.29□□□□□ -2.2
NOTCH3Q9UM47 MIR6717-201ENST00000622747 73 ntBASIC1.29□□□□□ -2.2
NOTCH3Q9UM47 MIR6079-201ENST00000635807 62 ntBASIC1.29□□□□□ -2.2
NOTCH3Q9UM47 WWP1P1-201ENST00000466609 2769 ntBASIC1.29□□□□□ -2.2
NOTCH3Q9UM47 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
NOTCH3Q9UM47 Y_RNA.168-201ENST00000363740 102 ntBASIC1.29□□□□□ -2.2
NOTCH3Q9UM47 RNU6-865P-201ENST00000364772 107 ntBASIC1.29□□□□□ -2.2
NOTCH3Q9UM47 Y_RNA.537-201ENST00000384626 109 ntBASIC1.29□□□□□ -2.2
NOTCH3Q9UM47 MIR516B2-201ENST00000385190 85 ntBASIC1.29□□□□□ -2.2
NOTCH3Q9UM47 RPL23AP6-201ENST00000446637 472 ntBASIC1.29□□□□□ -2.2
NOTCH3Q9UM47 AL645939.4-201ENST00000604495 135 ntBASIC1.29□□□□□ -2.2
NOTCH3Q9UM47 MIR8055-201ENST00000610739 97 ntBASIC1.29□□□□□ -2.2
NOTCH3Q9UM47 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.29□□□□□ -2.2
NOTCH3Q9UM47 RNU6-711P-201ENST00000517255 106 ntBASIC1.28□□□□□ -2.2
NOTCH3Q9UM47 MIR548AR-201ENST00000582191 57 ntBASIC1.28□□□□□ -2.2
NOTCH3Q9UM47 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
NOTCH3Q9UM47 MIR96-201ENST00000362288 78 ntBASIC1.28□□□□□ -2.2
NOTCH3Q9UM47 Y_RNA.316-201ENST00000365118 111 ntBASIC1.28□□□□□ -2.2
NOTCH3Q9UM47 RNU6-1072P-201ENST00000384703 107 ntBASIC1.28□□□□□ -2.2
NOTCH3Q9UM47 RNU6-443P-201ENST00000384780 107 ntBASIC1.28□□□□□ -2.2
NOTCH3Q9UM47 MIR452-201ENST00000385020 85 ntBASIC1.28□□□□□ -2.2
NOTCH3Q9UM47 RNU6-220P-201ENST00000390919 107 ntBASIC1.28□□□□□ -2.2
NOTCH3Q9UM47 RNU6-448P-201ENST00000517052 107 ntBASIC1.28□□□□□ -2.2
NOTCH3Q9UM47 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.28□□□□□ -2.2
NOTCH3Q9UM47 AC243994.1-201ENST00000618627 109 ntBASIC1.28□□□□□ -2.2
NOTCH3Q9UM47 MIR8065-201ENST00000620577 100 ntBASIC1.28□□□□□ -2.2
NOTCH3Q9UM47 RNU6-613P-201ENST00000410412 108 ntBASIC1.27□□□□□ -2.21
NOTCH3Q9UM47 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.27□□□□□ -2.21
NOTCH3Q9UM47 AC093850.1-201ENST00000454121 251 ntBASIC1.27□□□□□ -2.21
NOTCH3Q9UM47 RNU7-48P-201ENST00000458875 63 ntBASIC1.27□□□□□ -2.21
NOTCH3Q9UM47 snoU13.16-201ENST00000459350 104 ntBASIC1.27□□□□□ -2.21
NOTCH3Q9UM47 SNORA48.11-201ENST00000517015 89 ntBASIC1.27□□□□□ -2.21
NOTCH3Q9UM47 SNORA28-201ENST00000606769 126 ntBASIC1.27□□□□□ -2.21
NOTCH3Q9UM47 SNORD3E-202ENST00000627253 216 ntBASIC1.27□□□□□ -2.21
NOTCH3Q9UM47 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.27□□□□□ -2.21
NOTCH3Q9UM47 MIRLET7G-201ENST00000362280 84 ntBASIC1.27□□□□□ -2.21
NOTCH3Q9UM47 RNU6-1094P-201ENST00000362416 104 ntBASIC1.27□□□□□ -2.21
NOTCH3Q9UM47 SNORA68.1-201ENST00000364537 132 ntBASIC1.27□□□□□ -2.21
NOTCH3Q9UM47 RNA5SP331-201ENST00000364986 107 ntBASIC1.27□□□□□ -2.21
NOTCH3Q9UM47 SNORD28B-201ENST00000390993 75 ntBASIC1.27□□□□□ -2.21
NOTCH3Q9UM47 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.27□□□□□ -2.21
NOTCH3Q9UM47 RNU7-34P-201ENST00000459394 64 ntBASIC1.27□□□□□ -2.21
NOTCH3Q9UM47 RNA5SP168-201ENST00000516642 112 ntBASIC1.27□□□□□ -2.21
NOTCH3Q9UM47 MIR3169-201ENST00000578032 83 ntBASIC1.27□□□□□ -2.21
NOTCH3Q9UM47 AC069114.2-201ENST00000604699 304 ntBASIC1.27□□□□□ -2.21
NOTCH3Q9UM47 Y_RNA.788-201ENST00000622394 112 ntBASIC1.27□□□□□ -2.21
NOTCH3Q9UM47 AC022513.1-201ENST00000624512 117 ntBASIC1.27□□□□□ -2.21
NOTCH3Q9UM47 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.27□□□□□ -2.21
NOTCH3Q9UM47 RNU6-478P-201ENST00000363904 110 ntBASIC1.26□□□□□ -2.21
NOTCH3Q9UM47 MIR136-201ENST00000385207 82 ntBASIC1.26□□□□□ -2.21
NOTCH3Q9UM47 U8.16-201ENST00000391279 133 ntBASIC1.26□□□□□ -2.21
NOTCH3Q9UM47 MIR548J-201ENST00000408833 112 ntBASIC1.26□□□□□ -2.21
NOTCH3Q9UM47 RPL31P63-201ENST00000422565 375 ntBASIC1.26□□□□□ -2.21
NOTCH3Q9UM47 CYP2C59P-201ENST00000457790 269 ntBASIC1.26□□□□□ -2.21
NOTCH3Q9UM47 RNU7-79P-201ENST00000516082 62 ntBASIC1.26□□□□□ -2.21
NOTCH3Q9UM47 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.26□□□□□ -2.21
NOTCH3Q9UM47 FAM106DP-201ENST00000586416 501 ntBASIC1.26□□□□□ -2.21
NOTCH3Q9UM47 MIR502-201ENST00000606349 86 ntBASIC1.26□□□□□ -2.21
NOTCH3Q9UM47 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
NOTCH3Q9UM47 SNORA2B-201ENST00000384583 137 ntBASIC1.26□□□□□ -2.21
NOTCH3Q9UM47 RNU6-1190P-201ENST00000410811 104 ntBASIC1.26□□□□□ -2.21
NOTCH3Q9UM47 BX510359.4-201ENST00000423750 193 ntBASIC1.26□□□□□ -2.21
NOTCH3Q9UM47 AL450471.1-201ENST00000447509 127 ntBASIC1.26□□□□□ -2.21
NOTCH3Q9UM47 RNU7-12P-201ENST00000516030 62 ntBASIC1.26□□□□□ -2.21
NOTCH3Q9UM47 RNU6-667P-201ENST00000517186 102 ntBASIC1.26□□□□□ -2.21
NOTCH3Q9UM47 MTND5P40-201ENST00000559945 246 ntBASIC1.26□□□□□ -2.21
NOTCH3Q9UM47 MIR4419B-201ENST00000577260 68 ntBASIC1.26□□□□□ -2.21
NOTCH3Q9UM47 MIR3616-201ENST00000584070 92 ntBASIC1.26□□□□□ -2.21
NOTCH3Q9UM47 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.26□□□□□ -2.21
NOTCH3Q9UM47 AC012676.2-201ENST00000619258 186 ntBASIC1.26□□□□□ -2.21
NOTCH3Q9UM47 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.26□□□□□ -2.21
NOTCH3Q9UM47 MIR6841-201ENST00000637129 72 ntBASIC1.26□□□□□ -2.21
NOTCH3Q9UM47 SNORA22.1-201ENST00000362701 134 ntBASIC1.25□□□□□ -2.21
NOTCH3Q9UM47 CD24P4-201ENST00000382840 243 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms