Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 Y_RNA.191-201ENST00000363972 113 ntBASIC1.04□□□□□ -2.24
SMARCAL1Q9NZC9 Y_RNA.261-201ENST00000364631 102 ntBASIC1.04□□□□□ -2.24
SMARCAL1Q9NZC9 SNORD58C-201ENST00000365223 64 ntBASIC1.04□□□□□ -2.24
SMARCAL1Q9NZC9 Y_RNA.355-201ENST00000365462 98 ntBASIC1.04□□□□□ -2.24
SMARCAL1Q9NZC9 SNORA22-201ENST00000383907 134 ntBASIC1.04□□□□□ -2.24
SMARCAL1Q9NZC9 SNORA18-201ENST00000384416 132 ntBASIC1.04□□□□□ -2.24
SMARCAL1Q9NZC9 SNORA22C-201ENST00000384614 134 ntBASIC1.04□□□□□ -2.24
SMARCAL1Q9NZC9 MT-TI-201ENST00000387365 69 ntBASIC1.04□□□□□ -2.24
SMARCAL1Q9NZC9 MT-TN-201ENST00000387400 73 ntBASIC1.04□□□□□ -2.24
SMARCAL1Q9NZC9 MIR1276-201ENST00000408707 83 ntBASIC1.04□□□□□ -2.24
SMARCAL1Q9NZC9 AC002429.1-201ENST00000437672 148 ntBASIC1.04□□□□□ -2.24
SMARCAL1Q9NZC9 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.04□□□□□ -2.24
SMARCAL1Q9NZC9 RNU7-62P-201ENST00000458856 62 ntBASIC1.04□□□□□ -2.24
SMARCAL1Q9NZC9 snoU13.2-201ENST00000459201 104 ntBASIC1.04□□□□□ -2.24
SMARCAL1Q9NZC9 RNU7-90P-201ENST00000459216 62 ntBASIC1.04□□□□□ -2.24
SMARCAL1Q9NZC9 RNU6-789P-201ENST00000517105 102 ntBASIC1.04□□□□□ -2.24
SMARCAL1Q9NZC9 RNA5SP404-201ENST00000517118 132 ntBASIC1.04□□□□□ -2.24
SMARCAL1Q9NZC9 AL365222.1-201ENST00000614661 98 ntBASIC1.04□□□□□ -2.24
SMARCAL1Q9NZC9 AC027335.2-201ENST00000624030 375 ntBASIC1.04□□□□□ -2.24
SMARCAL1Q9NZC9 RNU4-38P-201ENST00000364472 129 ntBASIC1.03□□□□□ -2.24
SMARCAL1Q9NZC9 SNORA32-201ENST00000384072 121 ntBASIC1.03□□□□□ -2.24
SMARCAL1Q9NZC9 Y_RNA.528-201ENST00000384575 108 ntBASIC1.03□□□□□ -2.24
SMARCAL1Q9NZC9 SNORA19-201ENST00000384737 128 ntBASIC1.03□□□□□ -2.24
SMARCAL1Q9NZC9 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
SMARCAL1Q9NZC9 AL606753.1-201ENST00000427435 87 ntBASIC1.03□□□□□ -2.24
SMARCAL1Q9NZC9 RNU6-1333P-201ENST00000516162 93 ntBASIC1.03□□□□□ -2.24
SMARCAL1Q9NZC9 RNU6-659P-201ENST00000516454 104 ntBASIC1.03□□□□□ -2.24
SMARCAL1Q9NZC9 RNU6-406P-201ENST00000516470 107 ntBASIC1.03□□□□□ -2.24
SMARCAL1Q9NZC9 AC025166.1-201ENST00000612411 163 ntBASIC1.03□□□□□ -2.24
SMARCAL1Q9NZC9 Y_RNA.127-201ENST00000363386 109 ntBASIC1.02□□□□□ -2.25
SMARCAL1Q9NZC9 SNORD113.3-201ENST00000364630 78 ntBASIC1.02□□□□□ -2.25
SMARCAL1Q9NZC9 RNU6-580P-201ENST00000365159 107 ntBASIC1.02□□□□□ -2.25
SMARCAL1Q9NZC9 SNORD116-14-201ENST00000383894 92 ntBASIC1.02□□□□□ -2.25
SMARCAL1Q9NZC9 SNORD116-17-201ENST00000383929 92 ntBASIC1.02□□□□□ -2.25
SMARCAL1Q9NZC9 SNORD116-15-201ENST00000384445 92 ntBASIC1.02□□□□□ -2.25
SMARCAL1Q9NZC9 SNORD116-19-201ENST00000384729 92 ntBASIC1.02□□□□□ -2.25
SMARCAL1Q9NZC9 AC063976.4-201ENST00000421971 163 ntBASIC1.02□□□□□ -2.25
SMARCAL1Q9NZC9 RNA5SP102-201ENST00000516865 106 ntBASIC1.02□□□□□ -2.25
SMARCAL1Q9NZC9 MIR548AE2-201ENST00000583456 67 ntBASIC1.02□□□□□ -2.25
SMARCAL1Q9NZC9 AL078603.1-201ENST00000603824 313 ntBASIC1.02□□□□□ -2.25
SMARCAL1Q9NZC9 RNU6-94P-201ENST00000607728 107 ntBASIC1.02□□□□□ -2.25
SMARCAL1Q9NZC9 MIR377-201ENST00000362145 69 ntBASIC1.01□□□□□ -2.25
SMARCAL1Q9NZC9 SNORD115-2-201ENST00000362842 82 ntBASIC1.01□□□□□ -2.25
SMARCAL1Q9NZC9 Y_RNA.168-201ENST00000363740 102 ntBASIC1.01□□□□□ -2.25
SMARCAL1Q9NZC9 SNORD115-20-201ENST00000365099 82 ntBASIC1.01□□□□□ -2.25
SMARCAL1Q9NZC9 RNU6-1117P-201ENST00000384525 104 ntBASIC1.01□□□□□ -2.25
SMARCAL1Q9NZC9 MIRLET7F2-201ENST00000385277 83 ntBASIC1.01□□□□□ -2.25
SMARCAL1Q9NZC9 SNORD12-201ENST00000391002 90 ntBASIC1.01□□□□□ -2.25
SMARCAL1Q9NZC9 RNA5SP237-201ENST00000410414 113 ntBASIC1.01□□□□□ -2.25
SMARCAL1Q9NZC9 AC015818.7-201ENST00000428754 109 ntBASIC1.01□□□□□ -2.25
SMARCAL1Q9NZC9 AC087499.7-201ENST00000441958 109 ntBASIC1.01□□□□□ -2.25
SMARCAL1Q9NZC9 MIR4452-201ENST00000583004 71 ntBASIC1.01□□□□□ -2.25
SMARCAL1Q9NZC9 AC106800.4-201ENST00000614905 153 ntBASIC1.01□□□□□ -2.25
SMARCAL1Q9NZC9 MTND5P18-201ENST00000445624 1801 ntBASIC1.01□□□□□ -2.25
SMARCAL1Q9NZC9 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
SMARCAL1Q9NZC9 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1□□□□□ -2.25
SMARCAL1Q9NZC9 RNU6-22P-201ENST00000384355 107 ntBASIC1□□□□□ -2.25
SMARCAL1Q9NZC9 MIR563-201ENST00000385080 79 ntBASIC1□□□□□ -2.25
SMARCAL1Q9NZC9 RNU6-1165P-201ENST00000410119 107 ntBASIC1□□□□□ -2.25
SMARCAL1Q9NZC9 RNU6-735P-201ENST00000410612 107 ntBASIC1□□□□□ -2.25
SMARCAL1Q9NZC9 RNA5SP136-201ENST00000410906 107 ntBASIC1□□□□□ -2.25
SMARCAL1Q9NZC9 SNORD83.1-201ENST00000411362 77 ntBASIC1□□□□□ -2.25
SMARCAL1Q9NZC9 MIR1270-201ENST00000459320 83 ntBASIC1□□□□□ -2.25
SMARCAL1Q9NZC9 RPS23P4-201ENST00000487908 423 ntBASIC1□□□□□ -2.25
SMARCAL1Q9NZC9 U2.22-201ENST00000636441 106 ntBASIC1□□□□□ -2.25
SMARCAL1Q9NZC9 MIR30D-201ENST00000362283 70 ntBASIC0.99□□□□□ -2.25
SMARCAL1Q9NZC9 RNU6-1187P-201ENST00000364771 110 ntBASIC0.99□□□□□ -2.25
SMARCAL1Q9NZC9 SNORD111-201ENST00000408139 94 ntBASIC0.99□□□□□ -2.25
SMARCAL1Q9NZC9 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.99□□□□□ -2.25
SMARCAL1Q9NZC9 AC141846.1-201ENST00000568348 142 ntBASIC0.99□□□□□ -2.25
SMARCAL1Q9NZC9 AL662814.1-201ENST00000617364 121 ntBASIC0.99□□□□□ -2.25
SMARCAL1Q9NZC9 AC012676.2-201ENST00000619258 186 ntBASIC0.99□□□□□ -2.25
SMARCAL1Q9NZC9 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.99□□□□□ -2.25
SMARCAL1Q9NZC9 AL589743.1-201ENST00000551932 2712 ntBASIC0.98□□□□□ -2.25
SMARCAL1Q9NZC9 Y_RNA.198-201ENST00000364013 98 ntBASIC0.98□□□□□ -2.25
SMARCAL1Q9NZC9 SNORD113-1-201ENST00000365321 69 ntBASIC0.98□□□□□ -2.25
SMARCAL1Q9NZC9 RNU6-1086P-201ENST00000410930 100 ntBASIC0.98□□□□□ -2.25
SMARCAL1Q9NZC9 AC008267.6-201ENST00000441664 139 ntBASIC0.98□□□□□ -2.25
SMARCAL1Q9NZC9 SNORD124-201ENST00000459577 104 ntBASIC0.98□□□□□ -2.25
SMARCAL1Q9NZC9 COX6CP6-201ENST00000490840 228 ntBASIC0.98□□□□□ -2.25
SMARCAL1Q9NZC9 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.98□□□□□ -2.25
SMARCAL1Q9NZC9 RNU7-79P-201ENST00000516082 62 ntBASIC0.98□□□□□ -2.25
SMARCAL1Q9NZC9 RNA5SP220-201ENST00000516298 104 ntBASIC0.98□□□□□ -2.25
SMARCAL1Q9NZC9 Y_RNA.712-201ENST00000517011 92 ntBASIC0.98□□□□□ -2.25
SMARCAL1Q9NZC9 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.98□□□□□ -2.25
SMARCAL1Q9NZC9 MIR3914-2-201ENST00000637339 95 ntBASIC0.98□□□□□ -2.25
SMARCAL1Q9NZC9 RNY1P13-201ENST00000365030 105 ntBASIC0.97□□□□□ -2.25
SMARCAL1Q9NZC9 RNU6-934P-201ENST00000365154 107 ntBASIC0.97□□□□□ -2.25
SMARCAL1Q9NZC9 Y_RNA.346-201ENST00000365385 112 ntBASIC0.97□□□□□ -2.25
SMARCAL1Q9NZC9 RNU6-42P-201ENST00000384165 107 ntBASIC0.97□□□□□ -2.25
SMARCAL1Q9NZC9 RNU4-69P-201ENST00000410677 143 ntBASIC0.97□□□□□ -2.25
SMARCAL1Q9NZC9 UBL5P1-201ENST00000507979 193 ntBASIC0.97□□□□□ -2.25
SMARCAL1Q9NZC9 SNORD33.1-201ENST00000516213 88 ntBASIC0.97□□□□□ -2.25
SMARCAL1Q9NZC9 RNU6-62P-201ENST00000516526 102 ntBASIC0.97□□□□□ -2.25
SMARCAL1Q9NZC9 RNU7-6P-201ENST00000516845 62 ntBASIC0.97□□□□□ -2.25
SMARCAL1Q9NZC9 RNU7-35P-201ENST00000517174 62 ntBASIC0.97□□□□□ -2.25
SMARCAL1Q9NZC9 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.97□□□□□ -2.25
SMARCAL1Q9NZC9 MIR6734-201ENST00000621166 68 ntBASIC0.97□□□□□ -2.25
SMARCAL1Q9NZC9 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
SMARCAL1Q9NZC9 SNORD114-27-201ENST00000363766 70 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 223.4 ms