Protein–RNA interactions for Protein: Q9NZ09

UBAP1, Ubiquitin-associated protein 1, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1Q9NZ09 DLEU2_2.2-201ENST00000615474 90 ntBASIC-1.14□□□□□ -2.59
UBAP1Q9NZ09 MIR3179-4-201ENST00000617599 84 ntBASIC-1.14□□□□□ -2.59
UBAP1Q9NZ09 AC078883.4-201ENST00000623218 367 ntBASIC-1.14□□□□□ -2.59
UBAP1Q9NZ09 SNORD114-10-201ENST00000363409 72 ntBASIC-1.15□□□□□ -2.59
UBAP1Q9NZ09 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.15□□□□□ -2.59
UBAP1Q9NZ09 RNU6-937P-201ENST00000384325 106 ntBASIC-1.15□□□□□ -2.59
UBAP1Q9NZ09 RNU6-310P-201ENST00000384655 107 ntBASIC-1.15□□□□□ -2.59
UBAP1Q9NZ09 MIR517B-201ENST00000385102 67 ntBASIC-1.15□□□□□ -2.59
UBAP1Q9NZ09 RNA5SP266-201ENST00000410273 108 ntBASIC-1.15□□□□□ -2.59
UBAP1Q9NZ09 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-1.15□□□□□ -2.59
UBAP1Q9NZ09 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-1.15□□□□□ -2.59
UBAP1Q9NZ09 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.15□□□□□ -2.59
UBAP1Q9NZ09 RNU7-70P-201ENST00000516941 66 ntBASIC-1.15□□□□□ -2.59
UBAP1Q9NZ09 Y_RNA.717-201ENST00000517106 92 ntBASIC-1.15□□□□□ -2.59
UBAP1Q9NZ09 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.15□□□□□ -2.59
UBAP1Q9NZ09 AC024909.2-201ENST00000553035 286 ntBASIC-1.15□□□□□ -2.59
UBAP1Q9NZ09 MIR4324-201ENST00000584846 72 ntBASIC-1.15□□□□□ -2.59
UBAP1Q9NZ09 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.15□□□□□ -2.59
UBAP1Q9NZ09 Y_RNA.432-201ENST00000384087 111 ntBASIC-1.16□□□□□ -2.6
UBAP1Q9NZ09 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.16□□□□□ -2.6
UBAP1Q9NZ09 SNORA53-201ENST00000391141 249 ntBASIC-1.16□□□□□ -2.6
UBAP1Q9NZ09 RNY1P9-201ENST00000532431 109 ntBASIC-1.16□□□□□ -2.6
UBAP1Q9NZ09 AC140658.3-201ENST00000567603 271 ntBASIC-1.16□□□□□ -2.6
UBAP1Q9NZ09 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.16□□□□□ -2.6
UBAP1Q9NZ09 AC007485.1-201ENST00000616755 206 ntBASIC-1.16□□□□□ -2.6
UBAP1Q9NZ09 Y_RNA.286-201ENST00000364813 102 ntBASIC-1.17□□□□□ -2.6
UBAP1Q9NZ09 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.17□□□□□ -2.6
UBAP1Q9NZ09 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.17□□□□□ -2.6
UBAP1Q9NZ09 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.17□□□□□ -2.6
UBAP1Q9NZ09 RNU6-890P-201ENST00000384121 107 ntBASIC-1.17□□□□□ -2.6
UBAP1Q9NZ09 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.17□□□□□ -2.6
UBAP1Q9NZ09 MIR617-201ENST00000385030 97 ntBASIC-1.17□□□□□ -2.6
UBAP1Q9NZ09 MIR548I2-201ENST00000408348 149 ntBASIC-1.17□□□□□ -2.6
UBAP1Q9NZ09 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-1.17□□□□□ -2.6
UBAP1Q9NZ09 MIR20A-201ENST00000362279 71 ntBASIC-1.18□□□□□ -2.6
UBAP1Q9NZ09 RNU6-1272P-201ENST00000362776 107 ntBASIC-1.18□□□□□ -2.6
UBAP1Q9NZ09 SNORD115-2-201ENST00000362842 82 ntBASIC-1.18□□□□□ -2.6
UBAP1Q9NZ09 RNU6-1188P-201ENST00000363795 107 ntBASIC-1.18□□□□□ -2.6
UBAP1Q9NZ09 SNORD115-20-201ENST00000365099 82 ntBASIC-1.18□□□□□ -2.6
UBAP1Q9NZ09 RNU6-10P-201ENST00000384036 107 ntBASIC-1.18□□□□□ -2.6
UBAP1Q9NZ09 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.18□□□□□ -2.6
UBAP1Q9NZ09 RNU6-154P-201ENST00000384306 106 ntBASIC-1.18□□□□□ -2.6
UBAP1Q9NZ09 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.18□□□□□ -2.6
UBAP1Q9NZ09 AC096644.2-201ENST00000429278 159 ntBASIC-1.18□□□□□ -2.6
UBAP1Q9NZ09 SNORD22.1-201ENST00000516331 125 ntBASIC-1.18□□□□□ -2.6
UBAP1Q9NZ09 AP000676.1-201ENST00000533307 52 ntBASIC-1.18□□□□□ -2.6
UBAP1Q9NZ09 MIR5690-201ENST00000583739 73 ntBASIC-1.18□□□□□ -2.6
UBAP1Q9NZ09 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.19□□□□□ -2.6
UBAP1Q9NZ09 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.19□□□□□ -2.6
UBAP1Q9NZ09 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.19□□□□□ -2.6
UBAP1Q9NZ09 MIR587-201ENST00000384845 96 ntBASIC-1.19□□□□□ -2.6
UBAP1Q9NZ09 MIR519E-201ENST00000385075 84 ntBASIC-1.19□□□□□ -2.6
UBAP1Q9NZ09 PMCHL1-202ENST00000423102 261 ntBASIC-1.19□□□□□ -2.6
UBAP1Q9NZ09 snoU13.13-201ENST00000458842 104 ntBASIC-1.19□□□□□ -2.6
UBAP1Q9NZ09 RNU7-55P-201ENST00000459426 62 ntBASIC-1.19□□□□□ -2.6
UBAP1Q9NZ09 U8.20-201ENST00000459445 131 ntBASIC-1.19□□□□□ -2.6
UBAP1Q9NZ09 MRPS35P2-201ENST00000508242 191 ntBASIC-1.19□□□□□ -2.6
UBAP1Q9NZ09 SNORD67.1-201ENST00000516618 108 ntBASIC-1.19□□□□□ -2.6
UBAP1Q9NZ09 AL008718.3-201ENST00000610217 321 ntBASIC-1.19□□□□□ -2.6
UBAP1Q9NZ09 AC048344.4-201ENST00000619744 527 ntBASIC-1.19□□□□□ -2.6
UBAP1Q9NZ09 MIR4272-201ENST00000635924 64 ntBASIC-1.19□□□□□ -2.6
UBAP1Q9NZ09 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.2□□□□□ -2.6
UBAP1Q9NZ09 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.2□□□□□ -2.6
UBAP1Q9NZ09 Y_RNA.143-201ENST00000363520 106 ntBASIC-1.2□□□□□ -2.6
UBAP1Q9NZ09 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.2□□□□□ -2.6
UBAP1Q9NZ09 MIR518B-201ENST00000385127 83 ntBASIC-1.2□□□□□ -2.6
UBAP1Q9NZ09 SCARNA18B-201ENST00000458806 135 ntBASIC-1.2□□□□□ -2.6
UBAP1Q9NZ09 AC022137.1-201ENST00000483735 151 ntBASIC-1.2□□□□□ -2.6
UBAP1Q9NZ09 RNU6-570P-201ENST00000517051 105 ntBASIC-1.2□□□□□ -2.6
UBAP1Q9NZ09 MIR3129-201ENST00000581095 76 ntBASIC-1.2□□□□□ -2.6
UBAP1Q9NZ09 MIR548AE1-201ENST00000583292 70 ntBASIC-1.2□□□□□ -2.6
UBAP1Q9NZ09 RPS29P30-201ENST00000600975 111 ntBASIC-1.2□□□□□ -2.6
UBAP1Q9NZ09 AC011603.4-201ENST00000611325 277 ntBASIC-1.2□□□□□ -2.6
UBAP1Q9NZ09 AC133104.2-201ENST00000615272 193 ntBASIC-1.2□□□□□ -2.6
UBAP1Q9NZ09 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.21□□□□□ -2.6
UBAP1Q9NZ09 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.21□□□□□ -2.6
UBAP1Q9NZ09 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.21□□□□□ -2.6
UBAP1Q9NZ09 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.21□□□□□ -2.6
UBAP1Q9NZ09 Y_RNA.572-201ENST00000384757 98 ntBASIC-1.21□□□□□ -2.6
UBAP1Q9NZ09 SNORD64-201ENST00000386683 67 ntBASIC-1.21□□□□□ -2.6
UBAP1Q9NZ09 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.21□□□□□ -2.6
UBAP1Q9NZ09 AP000533.3-201ENST00000447704 118 ntBASIC-1.21□□□□□ -2.6
UBAP1Q9NZ09 SNRPGP8-201ENST00000454064 226 ntBASIC-1.21□□□□□ -2.6
UBAP1Q9NZ09 Y_RNA.635-201ENST00000459041 101 ntBASIC-1.21□□□□□ -2.6
UBAP1Q9NZ09 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.21□□□□□ -2.6
UBAP1Q9NZ09 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.21□□□□□ -2.6
UBAP1Q9NZ09 MIR4460-201ENST00000577862 86 ntBASIC-1.21□□□□□ -2.6
UBAP1Q9NZ09 MIR4760-201ENST00000585040 80 ntBASIC-1.21□□□□□ -2.6
UBAP1Q9NZ09 AL365205.2-201ENST00000594586 68 ntBASIC-1.21□□□□□ -2.6
UBAP1Q9NZ09 RNU6-431P-201ENST00000383874 107 ntBASIC-1.22□□□□□ -2.6
UBAP1Q9NZ09 AC244090.1-201ENST00000441884 93 ntBASIC-1.22□□□□□ -2.6
UBAP1Q9NZ09 RNU7-113P-201ENST00000459273 62 ntBASIC-1.22□□□□□ -2.6
UBAP1Q9NZ09 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.22□□□□□ -2.6
UBAP1Q9NZ09 MIR548AG2-201ENST00000581228 64 ntBASIC-1.22□□□□□ -2.6
UBAP1Q9NZ09 AL359881.1-201ENST00000602916 267 ntBASIC-1.22□□□□□ -2.6
UBAP1Q9NZ09 AC006006.1-201ENST00000603082 144 ntBASIC-1.22□□□□□ -2.6
UBAP1Q9NZ09 AL138825.1-201ENST00000618587 192 ntBASIC-1.22□□□□□ -2.6
UBAP1Q9NZ09 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.23□□□□□ -2.61
UBAP1Q9NZ09 Y_RNA.813-201ENST00000364639 102 ntBASIC-1.23□□□□□ -2.61
UBAP1Q9NZ09 RNU4-16P-201ENST00000364737 141 ntBASIC-1.23□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 199.9 ms