Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 AC022523.2-201ENST00000561045 150 ntBASIC1.16□□□□□ -2.22
DDX43Q9NXZ2 MIR4251-201ENST00000635819 61 ntBASIC1.16□□□□□ -2.22
DDX43Q9NXZ2 MIR302B-201ENST00000362188 73 ntBASIC1.15□□□□□ -2.23
DDX43Q9NXZ2 MIR96-201ENST00000362288 78 ntBASIC1.15□□□□□ -2.23
DDX43Q9NXZ2 RNU1-124P-201ENST00000363861 145 ntBASIC1.15□□□□□ -2.23
DDX43Q9NXZ2 Y_RNA.346-201ENST00000365385 112 ntBASIC1.15□□□□□ -2.23
DDX43Q9NXZ2 Y_RNA.466-201ENST00000384294 113 ntBASIC1.15□□□□□ -2.23
DDX43Q9NXZ2 RNU6-1064P-201ENST00000410626 104 ntBASIC1.15□□□□□ -2.23
DDX43Q9NXZ2 MRPL35P3-201ENST00000421557 364 ntBASIC1.15□□□□□ -2.23
DDX43Q9NXZ2 AL512326.2-201ENST00000426359 151 ntBASIC1.15□□□□□ -2.23
DDX43Q9NXZ2 AC245047.7-201ENST00000440265 293 ntBASIC1.15□□□□□ -2.23
DDX43Q9NXZ2 RPL39P39-201ENST00000455840 151 ntBASIC1.15□□□□□ -2.23
DDX43Q9NXZ2 AC048334.1-201ENST00000477975 159 ntBASIC1.15□□□□□ -2.23
DDX43Q9NXZ2 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
DDX43Q9NXZ2 SNORD115-2-201ENST00000362842 82 ntBASIC1.14□□□□□ -2.23
DDX43Q9NXZ2 Y_RNA.171-201ENST00000363760 102 ntBASIC1.14□□□□□ -2.23
DDX43Q9NXZ2 SNORD114-27-201ENST00000363766 70 ntBASIC1.14□□□□□ -2.23
DDX43Q9NXZ2 Y_RNA.198-201ENST00000364013 98 ntBASIC1.14□□□□□ -2.23
DDX43Q9NXZ2 RNU1-93P-201ENST00000364704 169 ntBASIC1.14□□□□□ -2.23
DDX43Q9NXZ2 SNORD115-20-201ENST00000365099 82 ntBASIC1.14□□□□□ -2.23
DDX43Q9NXZ2 RNU6-1067P-201ENST00000384752 107 ntBASIC1.14□□□□□ -2.23
DDX43Q9NXZ2 RNU6-910P-201ENST00000390844 107 ntBASIC1.14□□□□□ -2.23
DDX43Q9NXZ2 MIR1270-201ENST00000459320 83 ntBASIC1.14□□□□□ -2.23
DDX43Q9NXZ2 RNU6-589P-201ENST00000516485 107 ntBASIC1.14□□□□□ -2.23
DDX43Q9NXZ2 AC004812.1-201ENST00000540773 146 ntBASIC1.14□□□□□ -2.23
DDX43Q9NXZ2 AL670379.3-201ENST00000605040 251 ntBASIC1.14□□□□□ -2.23
DDX43Q9NXZ2 MIR6129-201ENST00000616087 109 ntBASIC1.14□□□□□ -2.23
DDX43Q9NXZ2 RMST_2.1-201ENST00000617263 136 ntBASIC1.14□□□□□ -2.23
DDX43Q9NXZ2 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.14□□□□□ -2.23
DDX43Q9NXZ2 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
DDX43Q9NXZ2 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
DDX43Q9NXZ2 SNORA22.1-201ENST00000362701 134 ntBASIC1.13□□□□□ -2.23
DDX43Q9NXZ2 RNU6-1325P-201ENST00000364905 105 ntBASIC1.13□□□□□ -2.23
DDX43Q9NXZ2 RNU6-1056P-201ENST00000383996 107 ntBASIC1.13□□□□□ -2.23
DDX43Q9NXZ2 Y_RNA.470-201ENST00000384307 117 ntBASIC1.13□□□□□ -2.23
DDX43Q9NXZ2 RNU6-602P-201ENST00000411155 105 ntBASIC1.13□□□□□ -2.23
DDX43Q9NXZ2 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.13□□□□□ -2.23
DDX43Q9NXZ2 OR2A41P-201ENST00000473586 105 ntBASIC1.13□□□□□ -2.23
DDX43Q9NXZ2 PRELID3BP2-201ENST00000605362 201 ntBASIC1.13□□□□□ -2.23
DDX43Q9NXZ2 SNORD114-21-201ENST00000606412 72 ntBASIC1.13□□□□□ -2.23
DDX43Q9NXZ2 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
DDX43Q9NXZ2 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
DDX43Q9NXZ2 Y_RNA.35-201ENST00000362601 101 ntBASIC1.12□□□□□ -2.23
DDX43Q9NXZ2 RNA5SP48-201ENST00000363969 126 ntBASIC1.12□□□□□ -2.23
DDX43Q9NXZ2 Y_RNA.531-201ENST00000384589 121 ntBASIC1.12□□□□□ -2.23
DDX43Q9NXZ2 SNORD12-201ENST00000391002 90 ntBASIC1.12□□□□□ -2.23
DDX43Q9NXZ2 Y_RNA.649-201ENST00000459077 103 ntBASIC1.12□□□□□ -2.23
DDX43Q9NXZ2 MIR6734-201ENST00000621166 68 ntBASIC1.12□□□□□ -2.23
DDX43Q9NXZ2 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
DDX43Q9NXZ2 MIR548A1-201ENST00000385041 97 ntBASIC1.11□□□□□ -2.23
DDX43Q9NXZ2 MIR548A3-201ENST00000385297 97 ntBASIC1.11□□□□□ -2.23
DDX43Q9NXZ2 RNY4P18-201ENST00000391107 89 ntBASIC1.11□□□□□ -2.23
DDX43Q9NXZ2 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.11□□□□□ -2.23
DDX43Q9NXZ2 MIR1185-1-201ENST00000408598 86 ntBASIC1.11□□□□□ -2.23
DDX43Q9NXZ2 AL022718.1-201ENST00000412004 84 ntBASIC1.11□□□□□ -2.23
DDX43Q9NXZ2 AC063976.4-201ENST00000421971 163 ntBASIC1.11□□□□□ -2.23
DDX43Q9NXZ2 AC244023.1-201ENST00000426884 112 ntBASIC1.11□□□□□ -2.23
DDX43Q9NXZ2 AC113410.1-201ENST00000505029 247 ntBASIC1.11□□□□□ -2.23
DDX43Q9NXZ2 MTND5P34-201ENST00000568888 325 ntBASIC1.11□□□□□ -2.23
DDX43Q9NXZ2 MIR3152-201ENST00000579801 74 ntBASIC1.11□□□□□ -2.23
DDX43Q9NXZ2 AC242498.1-201ENST00000604134 111 ntBASIC1.11□□□□□ -2.23
DDX43Q9NXZ2 AC103810.9-201ENST00000606688 112 ntBASIC1.11□□□□□ -2.23
DDX43Q9NXZ2 SNORA25.3-201ENST00000363205 127 ntBASIC1.1□□□□□ -2.23
DDX43Q9NXZ2 SNORA1.1-201ENST00000364671 133 ntBASIC1.1□□□□□ -2.23
DDX43Q9NXZ2 SNORA22-201ENST00000383907 134 ntBASIC1.1□□□□□ -2.23
DDX43Q9NXZ2 Y_RNA.549-201ENST00000384657 102 ntBASIC1.1□□□□□ -2.23
DDX43Q9NXZ2 MIR19B1-201ENST00000384829 87 ntBASIC1.1□□□□□ -2.23
DDX43Q9NXZ2 RNA5SP261-201ENST00000410536 106 ntBASIC1.1□□□□□ -2.23
DDX43Q9NXZ2 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.1□□□□□ -2.23
DDX43Q9NXZ2 RPS3AP1-201ENST00000413190 320 ntBASIC1.1□□□□□ -2.23
DDX43Q9NXZ2 Y_RNA.709-201ENST00000516952 92 ntBASIC1.1□□□□□ -2.23
DDX43Q9NXZ2 MIR4679-2-201ENST00000578358 77 ntBASIC1.1□□□□□ -2.23
DDX43Q9NXZ2 AC087741.2-201ENST00000619415 172 ntBASIC1.1□□□□□ -2.23
DDX43Q9NXZ2 AL035470.1-201ENST00000622571 220 ntBASIC1.1□□□□□ -2.23
DDX43Q9NXZ2 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.1□□□□□ -2.23
DDX43Q9NXZ2 Y_RNA.281-201ENST00000364774 94 ntBASIC1.09□□□□□ -2.23
DDX43Q9NXZ2 Y_RNA.344-201ENST00000365381 112 ntBASIC1.09□□□□□ -2.23
DDX43Q9NXZ2 SNORD116-21-201ENST00000384507 92 ntBASIC1.09□□□□□ -2.23
DDX43Q9NXZ2 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.09□□□□□ -2.23
DDX43Q9NXZ2 AL035461.1-201ENST00000421490 332 ntBASIC1.09□□□□□ -2.23
DDX43Q9NXZ2 SNORD79.1-201ENST00000516069 84 ntBASIC1.09□□□□□ -2.23
DDX43Q9NXZ2 RNU6-919P-201ENST00000516731 104 ntBASIC1.09□□□□□ -2.23
DDX43Q9NXZ2 AC007012.1-201ENST00000567192 175 ntBASIC1.09□□□□□ -2.23
DDX43Q9NXZ2 AC012676.2-201ENST00000619258 186 ntBASIC1.09□□□□□ -2.23
DDX43Q9NXZ2 AL391516.1-201ENST00000554380 2449 ntBASIC1.09□□□□□ -2.24
DDX43Q9NXZ2 Y_RNA.81-201ENST00000362997 102 ntBASIC1.08□□□□□ -2.24
DDX43Q9NXZ2 RNA5SP264-201ENST00000363115 107 ntBASIC1.08□□□□□ -2.24
DDX43Q9NXZ2 Y_RNA.363-201ENST00000365529 113 ntBASIC1.08□□□□□ -2.24
DDX43Q9NXZ2 RNU6-44P-201ENST00000384045 107 ntBASIC1.08□□□□□ -2.24
DDX43Q9NXZ2 RNU6-342P-201ENST00000384521 104 ntBASIC1.08□□□□□ -2.24
DDX43Q9NXZ2 RNU6-893P-201ENST00000458841 100 ntBASIC1.08□□□□□ -2.24
DDX43Q9NXZ2 RNU7-113P-201ENST00000459273 62 ntBASIC1.08□□□□□ -2.24
DDX43Q9NXZ2 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.08□□□□□ -2.24
DDX43Q9NXZ2 MIR548AE2-201ENST00000583456 67 ntBASIC1.08□□□□□ -2.24
DDX43Q9NXZ2 MIR6767-201ENST00000637302 66 ntBASIC1.08□□□□□ -2.24
DDX43Q9NXZ2 SNORD115-19-201ENST00000363098 82 ntBASIC1.07□□□□□ -2.24
DDX43Q9NXZ2 SNORD115-18-201ENST00000363293 82 ntBASIC1.07□□□□□ -2.24
DDX43Q9NXZ2 Y_RNA.213-201ENST00000364178 111 ntBASIC1.07□□□□□ -2.24
DDX43Q9NXZ2 RNU6-755P-201ENST00000364400 103 ntBASIC1.07□□□□□ -2.24
DDX43Q9NXZ2 RNU4-38P-201ENST00000364472 129 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 434.4 ms