Protein–RNA interactions for Protein: Q9NXX6

NSMCE4A, Non-structural maintenance of chromosomes element 4 homolog A, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4AQ9NXX6 SNORD44.1-201ENST00000363202 61 ntBASIC0.3□□□□□ -2.36
NSMCE4AQ9NXX6 RNA5SP62-201ENST00000363457 110 ntBASIC0.3□□□□□ -2.36
NSMCE4AQ9NXX6 Y_RNA.478-201ENST00000384358 107 ntBASIC0.3□□□□□ -2.36
NSMCE4AQ9NXX6 MIR613-201ENST00000385248 95 ntBASIC0.3□□□□□ -2.36
NSMCE4AQ9NXX6 MIR644A-201ENST00000385262 94 ntBASIC0.3□□□□□ -2.36
NSMCE4AQ9NXX6 MTND2P23-201ENST00000422990 651 ntBASIC0.3□□□□□ -2.36
NSMCE4AQ9NXX6 SNRPGP12-201ENST00000449481 213 ntBASIC0.3□□□□□ -2.36
NSMCE4AQ9NXX6 AC108740.1-201ENST00000498629 225 ntBASIC0.3□□□□□ -2.36
NSMCE4AQ9NXX6 RNU6-863P-201ENST00000515989 104 ntBASIC0.3□□□□□ -2.36
NSMCE4AQ9NXX6 Y_RNA.668-201ENST00000516233 93 ntBASIC0.3□□□□□ -2.36
NSMCE4AQ9NXX6 RNU6-275P-201ENST00000364910 107 ntBASIC0.29□□□□□ -2.36
NSMCE4AQ9NXX6 Y_RNA.521-201ENST00000384560 114 ntBASIC0.29□□□□□ -2.36
NSMCE4AQ9NXX6 Y_RNA.626-201ENST00000411288 95 ntBASIC0.29□□□□□ -2.36
NSMCE4AQ9NXX6 MIR4308-201ENST00000580634 81 ntBASIC0.29□□□□□ -2.36
NSMCE4AQ9NXX6 MIR4491-201ENST00000581087 68 ntBASIC0.29□□□□□ -2.36
NSMCE4AQ9NXX6 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.29□□□□□ -2.36
NSMCE4AQ9NXX6 Y_RNA.174-201ENST00000363781 105 ntBASIC0.28□□□□□ -2.36
NSMCE4AQ9NXX6 VTRNA1-3-201ENST00000365645 89 ntBASIC0.28□□□□□ -2.36
NSMCE4AQ9NXX6 Y_RNA.539-201ENST00000384635 107 ntBASIC0.28□□□□□ -2.36
NSMCE4AQ9NXX6 RNU6-1086P-201ENST00000410930 100 ntBASIC0.28□□□□□ -2.36
NSMCE4AQ9NXX6 AC096949.1-201ENST00000412047 152 ntBASIC0.28□□□□□ -2.36
NSMCE4AQ9NXX6 RNU6-135P-201ENST00000516769 101 ntBASIC0.28□□□□□ -2.36
NSMCE4AQ9NXX6 Y_RNA.697-201ENST00000516776 113 ntBASIC0.28□□□□□ -2.36
NSMCE4AQ9NXX6 AL360085.1-201ENST00000604713 532 ntBASIC0.28□□□□□ -2.36
NSMCE4AQ9NXX6 MTND5P32-201ENST00000560711 1802 ntBASIC0.27□□□□□ -2.37
NSMCE4AQ9NXX6 Y_RNA.133-201ENST00000363428 110 ntBASIC0.27□□□□□ -2.37
NSMCE4AQ9NXX6 RNU6-1229P-201ENST00000364295 107 ntBASIC0.27□□□□□ -2.37
NSMCE4AQ9NXX6 Y_RNA.393-201ENST00000383936 102 ntBASIC0.27□□□□□ -2.37
NSMCE4AQ9NXX6 RNY1P6-201ENST00000384193 109 ntBASIC0.27□□□□□ -2.37
NSMCE4AQ9NXX6 MRPS18CP4-201ENST00000535821 231 ntBASIC0.27□□□□□ -2.37
NSMCE4AQ9NXX6 Y_RNA.757-201ENST00000578934 114 ntBASIC0.27□□□□□ -2.37
NSMCE4AQ9NXX6 RN7SL793P-201ENST00000583259 296 ntBASIC0.27□□□□□ -2.37
NSMCE4AQ9NXX6 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
NSMCE4AQ9NXX6 Y_RNA.350-201ENST00000365409 98 ntBASIC0.26□□□□□ -2.37
NSMCE4AQ9NXX6 AC073261.1-201ENST00000429409 121 ntBASIC0.26□□□□□ -2.37
NSMCE4AQ9NXX6 RNU4-71P-201ENST00000516258 113 ntBASIC0.26□□□□□ -2.37
NSMCE4AQ9NXX6 DEFB131E-201ENST00000532329 154 ntBASIC0.26□□□□□ -2.37
NSMCE4AQ9NXX6 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.26□□□□□ -2.37
NSMCE4AQ9NXX6 RNU6-349P-201ENST00000362402 107 ntBASIC0.25□□□□□ -2.37
NSMCE4AQ9NXX6 Y_RNA.32-201ENST00000362589 110 ntBASIC0.25□□□□□ -2.37
NSMCE4AQ9NXX6 Y_RNA.75-201ENST00000362927 97 ntBASIC0.25□□□□□ -2.37
NSMCE4AQ9NXX6 SNORA36.1-201ENST00000363424 132 ntBASIC0.25□□□□□ -2.37
NSMCE4AQ9NXX6 RNU6-1099P-201ENST00000363533 107 ntBASIC0.25□□□□□ -2.37
NSMCE4AQ9NXX6 SNORD114-23-201ENST00000363536 72 ntBASIC0.25□□□□□ -2.37
NSMCE4AQ9NXX6 SNORD114-26-201ENST00000363543 72 ntBASIC0.25□□□□□ -2.37
NSMCE4AQ9NXX6 RNY1P13-201ENST00000365030 105 ntBASIC0.25□□□□□ -2.37
NSMCE4AQ9NXX6 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.25□□□□□ -2.37
NSMCE4AQ9NXX6 AC078938.1-201ENST00000620993 318 ntBASIC0.25□□□□□ -2.37
NSMCE4AQ9NXX6 AC010487.4-201ENST00000637027 61 ntBASIC0.25□□□□□ -2.37
NSMCE4AQ9NXX6 RNU6-694P-201ENST00000364071 147 ntBASIC0.24□□□□□ -2.37
NSMCE4AQ9NXX6 RNU6-535P-201ENST00000384722 107 ntBASIC0.24□□□□□ -2.37
NSMCE4AQ9NXX6 RNU6-327P-201ENST00000516270 127 ntBASIC0.24□□□□□ -2.37
NSMCE4AQ9NXX6 SNORA31.14-201ENST00000516728 116 ntBASIC0.24□□□□□ -2.37
NSMCE4AQ9NXX6 RNA5SP268-201ENST00000516828 124 ntBASIC0.24□□□□□ -2.37
NSMCE4AQ9NXX6 Y_RNA.171-201ENST00000363760 102 ntBASIC0.23□□□□□ -2.37
NSMCE4AQ9NXX6 Y_RNA.412-201ENST00000384001 104 ntBASIC0.23□□□□□ -2.37
NSMCE4AQ9NXX6 MIR568-201ENST00000385036 95 ntBASIC0.23□□□□□ -2.37
NSMCE4AQ9NXX6 RNA5SP144-201ENST00000410846 116 ntBASIC0.23□□□□□ -2.37
NSMCE4AQ9NXX6 AL022718.1-201ENST00000412004 84 ntBASIC0.23□□□□□ -2.37
NSMCE4AQ9NXX6 RNU7-113P-201ENST00000459273 62 ntBASIC0.23□□□□□ -2.37
NSMCE4AQ9NXX6 SNORA25.16-201ENST00000516741 121 ntBASIC0.23□□□□□ -2.37
NSMCE4AQ9NXX6 RNU6-1258P-201ENST00000516911 111 ntBASIC0.23□□□□□ -2.37
NSMCE4AQ9NXX6 AC062037.2-201ENST00000610137 73 ntBASIC0.23□□□□□ -2.37
NSMCE4AQ9NXX6 RNU6-1336P-201ENST00000383886 109 ntBASIC0.22□□□□□ -2.37
NSMCE4AQ9NXX6 Y_RNA.435-201ENST00000384095 112 ntBASIC0.22□□□□□ -2.37
NSMCE4AQ9NXX6 Y_RNA.536-201ENST00000384621 113 ntBASIC0.22□□□□□ -2.37
NSMCE4AQ9NXX6 RNA5SP227-201ENST00000516184 113 ntBASIC0.22□□□□□ -2.37
NSMCE4AQ9NXX6 RNU6-1194P-201ENST00000516208 104 ntBASIC0.22□□□□□ -2.37
NSMCE4AQ9NXX6 RNA5SP480-201ENST00000516840 109 ntBASIC0.22□□□□□ -2.37
NSMCE4AQ9NXX6 MTND5P34-201ENST00000568888 325 ntBASIC0.22□□□□□ -2.37
NSMCE4AQ9NXX6 MIR4431-201ENST00000579990 94 ntBASIC0.22□□□□□ -2.37
NSMCE4AQ9NXX6 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
NSMCE4AQ9NXX6 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.21□□□□□ -2.38
NSMCE4AQ9NXX6 Y_RNA.52-201ENST00000362760 96 ntBASIC0.21□□□□□ -2.38
NSMCE4AQ9NXX6 RNU6-291P-201ENST00000384720 107 ntBASIC0.21□□□□□ -2.38
NSMCE4AQ9NXX6 RNU2-59P-201ENST00000410482 191 ntBASIC0.21□□□□□ -2.38
NSMCE4AQ9NXX6 SUMO1P3-201ENST00000439961 304 ntBASIC0.21□□□□□ -2.38
NSMCE4AQ9NXX6 AL118496.2-201ENST00000448300 230 ntBASIC0.21□□□□□ -2.38
NSMCE4AQ9NXX6 RNU7-79P-201ENST00000516082 62 ntBASIC0.21□□□□□ -2.38
NSMCE4AQ9NXX6 RNU7-35P-201ENST00000517174 62 ntBASIC0.21□□□□□ -2.38
NSMCE4AQ9NXX6 MIR3128-201ENST00000581957 66 ntBASIC0.21□□□□□ -2.38
NSMCE4AQ9NXX6 U6.106-201ENST00000636360 105 ntBASIC0.21□□□□□ -2.38
NSMCE4AQ9NXX6 Y_RNA.36-201ENST00000362602 112 ntBASIC0.2□□□□□ -2.38
NSMCE4AQ9NXX6 RNU6-1023P-201ENST00000516137 106 ntBASIC0.2□□□□□ -2.38
NSMCE4AQ9NXX6 SCARNA16.5-201ENST00000517114 183 ntBASIC0.2□□□□□ -2.38
NSMCE4AQ9NXX6 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.2□□□□□ -2.38
NSMCE4AQ9NXX6 MIR6828-201ENST00000636181 60 ntBASIC0.2□□□□□ -2.38
NSMCE4AQ9NXX6 SNORD115-2-201ENST00000362842 82 ntBASIC0.19□□□□□ -2.38
NSMCE4AQ9NXX6 SNORD115-20-201ENST00000365099 82 ntBASIC0.19□□□□□ -2.38
NSMCE4AQ9NXX6 SNORA32-201ENST00000384072 121 ntBASIC0.19□□□□□ -2.38
NSMCE4AQ9NXX6 RNY1P4-201ENST00000384595 115 ntBASIC0.19□□□□□ -2.38
NSMCE4AQ9NXX6 RNA5SP236-201ENST00000516169 116 ntBASIC0.19□□□□□ -2.38
NSMCE4AQ9NXX6 RNU6-1045P-201ENST00000516321 107 ntBASIC0.19□□□□□ -2.38
NSMCE4AQ9NXX6 RNA5SP33-201ENST00000516687 98 ntBASIC0.19□□□□□ -2.38
NSMCE4AQ9NXX6 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.19□□□□□ -2.38
NSMCE4AQ9NXX6 U4.1-201ENST00000620349 87 ntBASIC0.19□□□□□ -2.38
NSMCE4AQ9NXX6 RNU6-690P-201ENST00000365242 106 ntBASIC0.18□□□□□ -2.38
NSMCE4AQ9NXX6 RNU6-918P-201ENST00000391219 106 ntBASIC0.18□□□□□ -2.38
NSMCE4AQ9NXX6 RNA5SP47-201ENST00000517230 109 ntBASIC0.18□□□□□ -2.38
NSMCE4AQ9NXX6 AC112693.2-201ENST00000556538 232 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 311.8 ms