Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AL138827.1-201ENST00000402666 306 ntBASIC2.65□□□□□ -1.99
CUEDC1Q9NWM3 RNU2-59P-201ENST00000410482 191 ntBASIC2.65□□□□□ -1.99
CUEDC1Q9NWM3 RNU4-83P-201ENST00000410863 133 ntBASIC2.65□□□□□ -1.99
CUEDC1Q9NWM3 AC244636.1-201ENST00000421152 228 ntBASIC2.65□□□□□ -1.99
CUEDC1Q9NWM3 snoU13.27-201ENST00000459278 104 ntBASIC2.65□□□□□ -1.99
CUEDC1Q9NWM3 RNU6-850P-201ENST00000516934 103 ntBASIC2.65□□□□□ -1.99
CUEDC1Q9NWM3 RNA5SP437-201ENST00000517249 129 ntBASIC2.65□□□□□ -1.99
CUEDC1Q9NWM3 AL773524.1-201ENST00000614065 229 ntBASIC2.65□□□□□ -1.99
CUEDC1Q9NWM3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
CUEDC1Q9NWM3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
CUEDC1Q9NWM3 RNU5F-1-201ENST00000362507 117 ntBASIC2.64□□□□□ -1.99
CUEDC1Q9NWM3 SNORA72.6-201ENST00000384520 129 ntBASIC2.64□□□□□ -1.99
CUEDC1Q9NWM3 MIR520C-201ENST00000385005 87 ntBASIC2.64□□□□□ -1.99
CUEDC1Q9NWM3 RNA5SP100-201ENST00000410903 110 ntBASIC2.64□□□□□ -1.99
CUEDC1Q9NWM3 RNA5SP59-201ENST00000410922 110 ntBASIC2.64□□□□□ -1.99
CUEDC1Q9NWM3 SNORD109B-201ENST00000458961 67 ntBASIC2.64□□□□□ -1.99
CUEDC1Q9NWM3 SNORD109A-201ENST00000459128 67 ntBASIC2.64□□□□□ -1.99
CUEDC1Q9NWM3 RNU6-70P-201ENST00000516438 60 ntBASIC2.64□□□□□ -1.99
CUEDC1Q9NWM3 RNU6-687P-201ENST00000516443 89 ntBASIC2.64□□□□□ -1.99
CUEDC1Q9NWM3 RNA5SP24-201ENST00000516478 95 ntBASIC2.64□□□□□ -1.99
CUEDC1Q9NWM3 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.64□□□□□ -1.99
CUEDC1Q9NWM3 MIR548AO-201ENST00000579992 96 ntBASIC2.64□□□□□ -1.99
CUEDC1Q9NWM3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.64□□□□□ -1.99
CUEDC1Q9NWM3 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.64□□□□□ -1.99
CUEDC1Q9NWM3 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.64□□□□□ -1.99
CUEDC1Q9NWM3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
CUEDC1Q9NWM3 MIR26A1-201ENST00000362205 77 ntBASIC2.63□□□□□ -1.99
CUEDC1Q9NWM3 RNU6-649P-201ENST00000384463 107 ntBASIC2.63□□□□□ -1.99
CUEDC1Q9NWM3 MIR520H-201ENST00000385126 88 ntBASIC2.63□□□□□ -1.99
CUEDC1Q9NWM3 MIR9-1-201ENST00000385198 89 ntBASIC2.63□□□□□ -1.99
CUEDC1Q9NWM3 SNORD77.2-201ENST00000391045 68 ntBASIC2.63□□□□□ -1.99
CUEDC1Q9NWM3 RNU6-1108P-201ENST00000516308 104 ntBASIC2.63□□□□□ -1.99
CUEDC1Q9NWM3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.63□□□□□ -1.99
CUEDC1Q9NWM3 MIR3935-201ENST00000583472 104 ntBASIC2.63□□□□□ -1.99
CUEDC1Q9NWM3 MIR4536-1-201ENST00000583537 88 ntBASIC2.63□□□□□ -1.99
CUEDC1Q9NWM3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.63□□□□□ -1.99
CUEDC1Q9NWM3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
CUEDC1Q9NWM3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CUEDC1Q9NWM3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
CUEDC1Q9NWM3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
CUEDC1Q9NWM3 Y_RNA.532-201ENST00000384590 113 ntBASIC2.62□□□□□ -1.99
CUEDC1Q9NWM3 AC027119.1-201ENST00000440877 241 ntBASIC2.62□□□□□ -1.99
CUEDC1Q9NWM3 RPS27P21-201ENST00000486977 252 ntBASIC2.62□□□□□ -1.99
CUEDC1Q9NWM3 SNORA9.3-201ENST00000516383 129 ntBASIC2.62□□□□□ -1.99
CUEDC1Q9NWM3 SNORA31.17-201ENST00000516953 127 ntBASIC2.62□□□□□ -1.99
CUEDC1Q9NWM3 MIR4251-201ENST00000635819 61 ntBASIC2.62□□□□□ -1.99
CUEDC1Q9NWM3 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CUEDC1Q9NWM3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.62□□□□□ -1.99
CUEDC1Q9NWM3 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CUEDC1Q9NWM3 RNU6-859P-201ENST00000362728 107 ntBASIC2.61□□□□□ -1.99
CUEDC1Q9NWM3 Y_RNA.386-201ENST00000383913 105 ntBASIC2.61□□□□□ -1.99
CUEDC1Q9NWM3 RNU6-296P-201ENST00000384608 107 ntBASIC2.61□□□□□ -1.99
CUEDC1Q9NWM3 RNA5SP21-201ENST00000410917 96 ntBASIC2.61□□□□□ -1.99
CUEDC1Q9NWM3 snoU13.15-201ENST00000459407 104 ntBASIC2.61□□□□□ -1.99
CUEDC1Q9NWM3 AC138749.4-201ENST00000563970 127 ntBASIC2.61□□□□□ -1.99
CUEDC1Q9NWM3 MIR4299-201ENST00000577899 72 ntBASIC2.61□□□□□ -1.99
CUEDC1Q9NWM3 MIR4500-201ENST00000579472 76 ntBASIC2.61□□□□□ -1.99
CUEDC1Q9NWM3 MIR3670-2-201ENST00000582974 65 ntBASIC2.61□□□□□ -1.99
CUEDC1Q9NWM3 MIR3670-1-201ENST00000584160 65 ntBASIC2.61□□□□□ -1.99
CUEDC1Q9NWM3 MIR3670-3-201ENST00000584855 65 ntBASIC2.61□□□□□ -1.99
CUEDC1Q9NWM3 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.61□□□□□ -1.99
CUEDC1Q9NWM3 MIR3670-4-201ENST00000612260 65 ntBASIC2.61□□□□□ -1.99
CUEDC1Q9NWM3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.6□□□□□ -1.99
CUEDC1Q9NWM3 U8.2-201ENST00000363156 134 ntBASIC2.6□□□□□ -1.99
CUEDC1Q9NWM3 AC023790.1-201ENST00000482174 347 ntBASIC2.6□□□□□ -1.99
CUEDC1Q9NWM3 AC008413.1-201ENST00000511864 177 ntBASIC2.6□□□□□ -1.99
CUEDC1Q9NWM3 SNORA18.5-201ENST00000516616 101 ntBASIC2.6□□□□□ -1.99
CUEDC1Q9NWM3 RNU6-303P-201ENST00000517091 106 ntBASIC2.6□□□□□ -1.99
CUEDC1Q9NWM3 Y_RNA.205-201ENST00000364128 113 ntBASIC2.59□□□□□ -1.99
CUEDC1Q9NWM3 MIR548U-201ENST00000390728 81 ntBASIC2.59□□□□□ -1.99
CUEDC1Q9NWM3 RNU6-587P-201ENST00000391282 106 ntBASIC2.59□□□□□ -1.99
CUEDC1Q9NWM3 AC019129.1-201ENST00000403786 261 ntBASIC2.59□□□□□ -1.99
CUEDC1Q9NWM3 snoU13.23-201ENST00000458863 104 ntBASIC2.59□□□□□ -1.99
CUEDC1Q9NWM3 AC121758.2-201ENST00000553271 193 ntBASIC2.59□□□□□ -1.99
CUEDC1Q9NWM3 SNORD53-201ENST00000579969 78 ntBASIC2.59□□□□□ -1.99
CUEDC1Q9NWM3 AC104996.3-201ENST00000590718 94 ntBASIC2.59□□□□□ -1.99
CUEDC1Q9NWM3 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
CUEDC1Q9NWM3 AC008163.1-202ENST00000636004 2889 ntBASIC2.58□□□□□ -2
CUEDC1Q9NWM3 AL596028.1-201ENST00000326971 197 ntBASIC2.58□□□□□ -2
CUEDC1Q9NWM3 MIR635-201ENST00000384830 98 ntBASIC2.58□□□□□ -2
CUEDC1Q9NWM3 RNA5SP292-201ENST00000390974 118 ntBASIC2.58□□□□□ -2
CUEDC1Q9NWM3 AC074348.1-201ENST00000426503 132 ntBASIC2.58□□□□□ -2
CUEDC1Q9NWM3 HSPE1P24-201ENST00000450782 238 ntBASIC2.58□□□□□ -2
CUEDC1Q9NWM3 snoU13.2-201ENST00000459201 104 ntBASIC2.58□□□□□ -2
CUEDC1Q9NWM3 MIR3064-201ENST00000581130 66 ntBASIC2.58□□□□□ -2
CUEDC1Q9NWM3 MIR4635-201ENST00000583759 79 ntBASIC2.58□□□□□ -2
CUEDC1Q9NWM3 SNORD92-201ENST00000585078 85 ntBASIC2.58□□□□□ -2
CUEDC1Q9NWM3 SNORD36A-201ENST00000362874 73 ntBASIC2.57□□□□□ -2
CUEDC1Q9NWM3 RNA5SP210-201ENST00000391034 120 ntBASIC2.57□□□□□ -2
CUEDC1Q9NWM3 RNU6-1254P-201ENST00000391266 104 ntBASIC2.57□□□□□ -2
CUEDC1Q9NWM3 DEFB122-202ENST00000569013 197 ntBASIC2.57□□□□□ -2
CUEDC1Q9NWM3 MIR4484-201ENST00000582855 83 ntBASIC2.57□□□□□ -2
CUEDC1Q9NWM3 MIR6840-201ENST00000611937 71 ntBASIC2.57□□□□□ -2
CUEDC1Q9NWM3 RNU6-1123P-201ENST00000362347 106 ntBASIC2.56□□□□□ -2
CUEDC1Q9NWM3 RNU6-208P-201ENST00000362431 107 ntBASIC2.56□□□□□ -2
CUEDC1Q9NWM3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.56□□□□□ -2
CUEDC1Q9NWM3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.56□□□□□ -2
CUEDC1Q9NWM3 AC005908.1-201ENST00000468701 347 ntBASIC2.56□□□□□ -2
CUEDC1Q9NWM3 MIR4713-201ENST00000582691 75 ntBASIC2.56□□□□□ -2
CUEDC1Q9NWM3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 205 ms