Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 SNORA17.3-201ENST00000391159 129 ntBASIC1.3□□□□□ -2.2
RLIMQ9NVW2 RNU6-1064P-201ENST00000410626 104 ntBASIC1.3□□□□□ -2.2
RLIMQ9NVW2 SNORD83.1-201ENST00000411362 77 ntBASIC1.3□□□□□ -2.2
RLIMQ9NVW2 RNU7-79P-201ENST00000516082 62 ntBASIC1.3□□□□□ -2.2
RLIMQ9NVW2 AC036111.3-201ENST00000526389 112 ntBASIC1.3□□□□□ -2.2
RLIMQ9NVW2 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.3□□□□□ -2.2
RLIMQ9NVW2 AC141846.1-201ENST00000568348 142 ntBASIC1.3□□□□□ -2.2
RLIMQ9NVW2 MIR4303-201ENST00000581299 66 ntBASIC1.3□□□□□ -2.2
RLIMQ9NVW2 MIR6129-201ENST00000616087 109 ntBASIC1.3□□□□□ -2.2
RLIMQ9NVW2 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.29□□□□□ -2.2
RLIMQ9NVW2 RNU6-1056P-201ENST00000383996 107 ntBASIC1.29□□□□□ -2.2
RLIMQ9NVW2 SNORD26-201ENST00000384147 75 ntBASIC1.29□□□□□ -2.2
RLIMQ9NVW2 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.29□□□□□ -2.2
RLIMQ9NVW2 AC063976.4-201ENST00000421971 163 ntBASIC1.29□□□□□ -2.2
RLIMQ9NVW2 AC015818.7-201ENST00000428754 109 ntBASIC1.29□□□□□ -2.2
RLIMQ9NVW2 AC087499.7-201ENST00000441958 109 ntBASIC1.29□□□□□ -2.2
RLIMQ9NVW2 AC108729.3-201ENST00000513484 108 ntBASIC1.29□□□□□ -2.2
RLIMQ9NVW2 AL391516.1-201ENST00000554380 2449 ntBASIC1.28□□□□□ -2.2
RLIMQ9NVW2 RNY4P6-201ENST00000363667 96 ntBASIC1.28□□□□□ -2.2
RLIMQ9NVW2 SNORD116-21-201ENST00000384507 92 ntBASIC1.28□□□□□ -2.2
RLIMQ9NVW2 MIR548D2-201ENST00000384955 97 ntBASIC1.28□□□□□ -2.2
RLIMQ9NVW2 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
RLIMQ9NVW2 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.28□□□□□ -2.2
RLIMQ9NVW2 AC108667.1-201ENST00000428618 249 ntBASIC1.28□□□□□ -2.2
RLIMQ9NVW2 RPS29P23-201ENST00000458635 123 ntBASIC1.28□□□□□ -2.2
RLIMQ9NVW2 MIR1270-201ENST00000459320 83 ntBASIC1.28□□□□□ -2.2
RLIMQ9NVW2 RNU7-40P-201ENST00000516397 64 ntBASIC1.28□□□□□ -2.2
RLIMQ9NVW2 RNU7-35P-201ENST00000517174 62 ntBASIC1.28□□□□□ -2.2
RLIMQ9NVW2 AC068338.1-201ENST00000565567 176 ntBASIC1.28□□□□□ -2.2
RLIMQ9NVW2 AC007012.1-201ENST00000567192 175 ntBASIC1.28□□□□□ -2.2
RLIMQ9NVW2 MIR4781-201ENST00000585250 76 ntBASIC1.28□□□□□ -2.2
RLIMQ9NVW2 AC106800.4-201ENST00000614905 153 ntBASIC1.28□□□□□ -2.2
RLIMQ9NVW2 AC012676.2-201ENST00000619258 186 ntBASIC1.28□□□□□ -2.2
RLIMQ9NVW2 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
RLIMQ9NVW2 SNORA63.5-201ENST00000363548 123 ntBASIC1.27□□□□□ -2.21
RLIMQ9NVW2 SNORA25.8-201ENST00000364831 128 ntBASIC1.27□□□□□ -2.21
RLIMQ9NVW2 RNU6-1144P-201ENST00000384247 104 ntBASIC1.27□□□□□ -2.21
RLIMQ9NVW2 RNU6-616P-201ENST00000384353 107 ntBASIC1.27□□□□□ -2.21
RLIMQ9NVW2 SNORA67.5-201ENST00000391036 107 ntBASIC1.27□□□□□ -2.21
RLIMQ9NVW2 SNORD111-201ENST00000408139 94 ntBASIC1.27□□□□□ -2.21
RLIMQ9NVW2 RNU6-955P-201ENST00000410497 104 ntBASIC1.27□□□□□ -2.21
RLIMQ9NVW2 AC002429.1-201ENST00000437672 148 ntBASIC1.27□□□□□ -2.21
RLIMQ9NVW2 SNORD67.1-201ENST00000516618 108 ntBASIC1.27□□□□□ -2.21
RLIMQ9NVW2 MIR4498-201ENST00000577599 66 ntBASIC1.27□□□□□ -2.21
RLIMQ9NVW2 SNORA4-201ENST00000584302 138 ntBASIC1.27□□□□□ -2.21
RLIMQ9NVW2 AC105081.1-201ENST00000617727 106 ntBASIC1.27□□□□□ -2.21
RLIMQ9NVW2 AC087741.2-201ENST00000619415 172 ntBASIC1.27□□□□□ -2.21
RLIMQ9NVW2 RNY1P13-201ENST00000365030 105 ntBASIC1.26□□□□□ -2.21
RLIMQ9NVW2 Y_RNA.362-201ENST00000365518 110 ntBASIC1.26□□□□□ -2.21
RLIMQ9NVW2 Y_RNA.549-201ENST00000384657 102 ntBASIC1.26□□□□□ -2.21
RLIMQ9NVW2 MIR563-201ENST00000385080 79 ntBASIC1.26□□□□□ -2.21
RLIMQ9NVW2 RNU6-1053P-201ENST00000515930 101 ntBASIC1.26□□□□□ -2.21
RLIMQ9NVW2 MIR4771-2-201ENST00000577758 74 ntBASIC1.26□□□□□ -2.21
RLIMQ9NVW2 MIR4771-1-201ENST00000582617 74 ntBASIC1.26□□□□□ -2.21
RLIMQ9NVW2 FAM71BP1-201ENST00000604431 523 ntBASIC1.26□□□□□ -2.21
RLIMQ9NVW2 AL035470.1-201ENST00000622571 220 ntBASIC1.26□□□□□ -2.21
RLIMQ9NVW2 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
RLIMQ9NVW2 AC023934.1-201ENST00000574529 2389 ntBASIC1.26□□□□□ -2.21
RLIMQ9NVW2 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
RLIMQ9NVW2 MIR30D-201ENST00000362283 70 ntBASIC1.25□□□□□ -2.21
RLIMQ9NVW2 Y_RNA.35-201ENST00000362601 101 ntBASIC1.25□□□□□ -2.21
RLIMQ9NVW2 Y_RNA.273-201ENST00000364703 102 ntBASIC1.25□□□□□ -2.21
RLIMQ9NVW2 RNU6-934P-201ENST00000365154 107 ntBASIC1.25□□□□□ -2.21
RLIMQ9NVW2 RNU6-580P-201ENST00000365159 107 ntBASIC1.25□□□□□ -2.21
RLIMQ9NVW2 Y_RNA.344-201ENST00000365381 112 ntBASIC1.25□□□□□ -2.21
RLIMQ9NVW2 RNU6-880P-201ENST00000384526 107 ntBASIC1.25□□□□□ -2.21
RLIMQ9NVW2 SNORD12-201ENST00000391002 90 ntBASIC1.25□□□□□ -2.21
RLIMQ9NVW2 Y_RNA.773-201ENST00000607168 90 ntBASIC1.25□□□□□ -2.21
RLIMQ9NVW2 AC027335.2-201ENST00000624030 375 ntBASIC1.25□□□□□ -2.21
RLIMQ9NVW2 MIR1255B1-201ENST00000636325 63 ntBASIC1.25□□□□□ -2.21
RLIMQ9NVW2 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
RLIMQ9NVW2 MT-TF-201ENST00000387314 71 ntBASIC1.24□□□□□ -2.21
RLIMQ9NVW2 MIR758-201ENST00000390227 88 ntBASIC1.24□□□□□ -2.21
RLIMQ9NVW2 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.24□□□□□ -2.21
RLIMQ9NVW2 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.24□□□□□ -2.21
RLIMQ9NVW2 Y_RNA.629-201ENST00000411368 105 ntBASIC1.24□□□□□ -2.21
RLIMQ9NVW2 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.24□□□□□ -2.21
RLIMQ9NVW2 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.24□□□□□ -2.21
RLIMQ9NVW2 RNU6-949P-201ENST00000384040 107 ntBASIC1.23□□□□□ -2.21
RLIMQ9NVW2 SNORD93-201ENST00000408813 74 ntBASIC1.23□□□□□ -2.21
RLIMQ9NVW2 AC067940.1-201ENST00000458411 300 ntBASIC1.23□□□□□ -2.21
RLIMQ9NVW2 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.23□□□□□ -2.21
RLIMQ9NVW2 RNU7-137P-201ENST00000516788 62 ntBASIC1.23□□□□□ -2.21
RLIMQ9NVW2 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.23□□□□□ -2.21
RLIMQ9NVW2 MIR378A-201ENST00000362177 66 ntBASIC1.22□□□□□ -2.21
RLIMQ9NVW2 RNU6-834P-201ENST00000362367 110 ntBASIC1.22□□□□□ -2.21
RLIMQ9NVW2 Y_RNA.226-201ENST00000364337 114 ntBASIC1.22□□□□□ -2.21
RLIMQ9NVW2 RNU6-429P-201ENST00000384582 108 ntBASIC1.22□□□□□ -2.21
RLIMQ9NVW2 MIR206-201ENST00000384872 86 ntBASIC1.22□□□□□ -2.21
RLIMQ9NVW2 MIR100-201ENST00000385259 80 ntBASIC1.22□□□□□ -2.21
RLIMQ9NVW2 MIR1257-201ENST00000408490 117 ntBASIC1.22□□□□□ -2.21
RLIMQ9NVW2 RPS29P28-201ENST00000446439 141 ntBASIC1.22□□□□□ -2.21
RLIMQ9NVW2 MIR18B-201ENST00000454574 71 ntBASIC1.22□□□□□ -2.21
RLIMQ9NVW2 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.22□□□□□ -2.21
RLIMQ9NVW2 ZNF209P-201ENST00000593450 2304 ntBASIC1.22□□□□□ -2.21
RLIMQ9NVW2 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
RLIMQ9NVW2 SNORD115-19-201ENST00000363098 82 ntBASIC1.21□□□□□ -2.22
RLIMQ9NVW2 SNORD115-18-201ENST00000363293 82 ntBASIC1.21□□□□□ -2.22
RLIMQ9NVW2 SNORD115-17-201ENST00000364612 82 ntBASIC1.21□□□□□ -2.22
RLIMQ9NVW2 RNU6-1325P-201ENST00000364905 105 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 201.4 ms