Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 MIR1291-201ENST00000627649 87 ntBASIC2.6□□□□□ -1.99
NUCKS1Q9H1E3 MIR4251-201ENST00000635819 61 ntBASIC2.6□□□□□ -1.99
NUCKS1Q9H1E3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
NUCKS1Q9H1E3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
NUCKS1Q9H1E3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.59□□□□□ -1.99
NUCKS1Q9H1E3 RNU4-82P-201ENST00000362443 140 ntBASIC2.59□□□□□ -1.99
NUCKS1Q9H1E3 SNORA38-201ENST00000363946 132 ntBASIC2.59□□□□□ -1.99
NUCKS1Q9H1E3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
NUCKS1Q9H1E3 SNORA63.2-201ENST00000362603 126 ntBASIC2.58□□□□□ -2
NUCKS1Q9H1E3 RNU6-686P-201ENST00000364839 107 ntBASIC2.58□□□□□ -2
NUCKS1Q9H1E3 RNU6-949P-201ENST00000384040 107 ntBASIC2.58□□□□□ -2
NUCKS1Q9H1E3 RPS27P21-201ENST00000486977 252 ntBASIC2.58□□□□□ -2
NUCKS1Q9H1E3 RNA5SP445-201ENST00000515889 115 ntBASIC2.58□□□□□ -2
NUCKS1Q9H1E3 MIR4796-201ENST00000580742 81 ntBASIC2.58□□□□□ -2
NUCKS1Q9H1E3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.58□□□□□ -2
NUCKS1Q9H1E3 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC2.57□□□□□ -2
NUCKS1Q9H1E3 Y_RNA.648-201ENST00000459455 110 ntBASIC2.57□□□□□ -2
NUCKS1Q9H1E3 RNU7-41P-201ENST00000515917 61 ntBASIC2.57□□□□□ -2
NUCKS1Q9H1E3 RNU6-850P-201ENST00000516934 103 ntBASIC2.57□□□□□ -2
NUCKS1Q9H1E3 AC138749.4-201ENST00000563970 127 ntBASIC2.57□□□□□ -2
NUCKS1Q9H1E3 MIR3935-201ENST00000583472 104 ntBASIC2.57□□□□□ -2
NUCKS1Q9H1E3 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
NUCKS1Q9H1E3 HMGN2P39-201ENST00000398005 273 ntBASIC2.56□□□□□ -2
NUCKS1Q9H1E3 RNU6-539P-201ENST00000516665 103 ntBASIC2.56□□□□□ -2
NUCKS1Q9H1E3 MIR4500-201ENST00000579472 76 ntBASIC2.56□□□□□ -2
NUCKS1Q9H1E3 MIR4513-201ENST00000581077 86 ntBASIC2.56□□□□□ -2
NUCKS1Q9H1E3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
NUCKS1Q9H1E3 RNU6-161P-201ENST00000363051 106 ntBASIC2.55□□□□□ -2
NUCKS1Q9H1E3 RNU4-52P-201ENST00000384209 138 ntBASIC2.55□□□□□ -2
NUCKS1Q9H1E3 RNU6-301P-201ENST00000384277 107 ntBASIC2.55□□□□□ -2
NUCKS1Q9H1E3 SNORA67.4-201ENST00000384688 142 ntBASIC2.55□□□□□ -2
NUCKS1Q9H1E3 WWP1P1-201ENST00000466609 2769 ntBASIC2.55□□□□□ -2
NUCKS1Q9H1E3 AC005908.1-201ENST00000468701 347 ntBASIC2.55□□□□□ -2
NUCKS1Q9H1E3 RNA5SP24-201ENST00000516478 95 ntBASIC2.55□□□□□ -2
NUCKS1Q9H1E3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
NUCKS1Q9H1E3 ZNF658B-202ENST00000615961 3375 ntBASIC2.54□□□□□ -2
NUCKS1Q9H1E3 MIRLET7G-201ENST00000362280 84 ntBASIC2.54□□□□□ -2
NUCKS1Q9H1E3 RNU1-51P-201ENST00000365345 176 ntBASIC2.54□□□□□ -2
NUCKS1Q9H1E3 SNORA40.18-201ENST00000391200 128 ntBASIC2.54□□□□□ -2
NUCKS1Q9H1E3 RNU6-380P-201ENST00000410207 107 ntBASIC2.54□□□□□ -2
NUCKS1Q9H1E3 HMGN2P38-201ENST00000423806 265 ntBASIC2.54□□□□□ -2
NUCKS1Q9H1E3 AC009474.2-201ENST00000451383 136 ntBASIC2.54□□□□□ -2
NUCKS1Q9H1E3 AC026436.1-201ENST00000510537 270 ntBASIC2.54□□□□□ -2
NUCKS1Q9H1E3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.54□□□□□ -2
NUCKS1Q9H1E3 RNA5SP289-201ENST00000362332 137 ntBASIC2.53□□□□□ -2
NUCKS1Q9H1E3 RNU6-571P-201ENST00000384128 107 ntBASIC2.53□□□□□ -2
NUCKS1Q9H1E3 RNU6-411P-201ENST00000384451 107 ntBASIC2.53□□□□□ -2
NUCKS1Q9H1E3 RNA5SP292-201ENST00000390974 118 ntBASIC2.53□□□□□ -2
NUCKS1Q9H1E3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.53□□□□□ -2
NUCKS1Q9H1E3 AC244023.1-201ENST00000426884 112 ntBASIC2.53□□□□□ -2
NUCKS1Q9H1E3 RNU6-1108P-201ENST00000516308 104 ntBASIC2.53□□□□□ -2
NUCKS1Q9H1E3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.53□□□□□ -2
NUCKS1Q9H1E3 AC242498.1-201ENST00000604134 111 ntBASIC2.53□□□□□ -2
NUCKS1Q9H1E3 U6.109-201ENST00000636749 87 ntBASIC2.53□□□□□ -2
NUCKS1Q9H1E3 AP006437.1-201ENST00000641440 3685 ntBASIC2.53□□□□□ -2.01
NUCKS1Q9H1E3 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
NUCKS1Q9H1E3 RNU6-1123P-201ENST00000362347 106 ntBASIC2.52□□□□□ -2.01
NUCKS1Q9H1E3 RNU6-811P-201ENST00000384069 107 ntBASIC2.52□□□□□ -2.01
NUCKS1Q9H1E3 Y_RNA.532-201ENST00000384590 113 ntBASIC2.52□□□□□ -2.01
NUCKS1Q9H1E3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
NUCKS1Q9H1E3 BX276092.1-201ENST00000427368 251 ntBASIC2.52□□□□□ -2.01
NUCKS1Q9H1E3 snoU13.2-201ENST00000459201 104 ntBASIC2.52□□□□□ -2.01
NUCKS1Q9H1E3 FGF7P7-201ENST00000514120 227 ntBASIC2.52□□□□□ -2.01
NUCKS1Q9H1E3 MIR514B-201ENST00000516774 80 ntBASIC2.52□□□□□ -2.01
NUCKS1Q9H1E3 MIR5007-201ENST00000583098 95 ntBASIC2.52□□□□□ -2.01
NUCKS1Q9H1E3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
NUCKS1Q9H1E3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
NUCKS1Q9H1E3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
NUCKS1Q9H1E3 SNORA72.6-201ENST00000384520 129 ntBASIC2.51□□□□□ -2.01
NUCKS1Q9H1E3 RNA5SP100-201ENST00000410903 110 ntBASIC2.51□□□□□ -2.01
NUCKS1Q9H1E3 RNA5SP59-201ENST00000410922 110 ntBASIC2.51□□□□□ -2.01
NUCKS1Q9H1E3 Y_RNA.660-201ENST00000516002 120 ntBASIC2.51□□□□□ -2.01
NUCKS1Q9H1E3 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.51□□□□□ -2.01
NUCKS1Q9H1E3 RNU6-1015P-201ENST00000517121 99 ntBASIC2.51□□□□□ -2.01
NUCKS1Q9H1E3 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.51□□□□□ -2.01
NUCKS1Q9H1E3 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.51□□□□□ -2.01
NUCKS1Q9H1E3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
NUCKS1Q9H1E3 AC023790.1-201ENST00000482174 347 ntBASIC2.5□□□□□ -2.01
NUCKS1Q9H1E3 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.5□□□□□ -2.01
NUCKS1Q9H1E3 MIR6766-201ENST00000622641 72 ntBASIC2.5□□□□□ -2.01
NUCKS1Q9H1E3 AL359851.1-201ENST00000569460 4997 ntBASIC2.5□□□□□ -2.01
NUCKS1Q9H1E3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
NUCKS1Q9H1E3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.49□□□□□ -2.01
NUCKS1Q9H1E3 Y_RNA.119-201ENST00000363301 96 ntBASIC2.49□□□□□ -2.01
NUCKS1Q9H1E3 RNU6-203P-201ENST00000384038 104 ntBASIC2.49□□□□□ -2.01
NUCKS1Q9H1E3 MIR653-201ENST00000385279 96 ntBASIC2.49□□□□□ -2.01
NUCKS1Q9H1E3 RNU6-871P-201ENST00000516122 100 ntBASIC2.49□□□□□ -2.01
NUCKS1Q9H1E3 SNORA18.5-201ENST00000516616 101 ntBASIC2.49□□□□□ -2.01
NUCKS1Q9H1E3 SNORA31.17-201ENST00000516953 127 ntBASIC2.49□□□□□ -2.01
NUCKS1Q9H1E3 AC046143.2-201ENST00000609789 160 ntBASIC2.49□□□□□ -2.01
NUCKS1Q9H1E3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
NUCKS1Q9H1E3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
NUCKS1Q9H1E3 SNORA25.9-201ENST00000365087 128 ntBASIC2.48□□□□□ -2.01
NUCKS1Q9H1E3 RNA5SP126-201ENST00000365092 109 ntBASIC2.48□□□□□ -2.01
NUCKS1Q9H1E3 MIR635-201ENST00000384830 98 ntBASIC2.48□□□□□ -2.01
NUCKS1Q9H1E3 MIR588-201ENST00000384900 83 ntBASIC2.48□□□□□ -2.01
NUCKS1Q9H1E3 MIR563-201ENST00000385080 79 ntBASIC2.48□□□□□ -2.01
NUCKS1Q9H1E3 RNU6-448P-201ENST00000517052 107 ntBASIC2.48□□□□□ -2.01
NUCKS1Q9H1E3 MIR4536-1-201ENST00000583537 88 ntBASIC2.48□□□□□ -2.01
NUCKS1Q9H1E3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 265.3 ms