Protein–RNA interactions for Protein: Q9BQQ7

RTP3, Receptor-transporting protein 3, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3Q9BQQ7 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.93□□□□□ -2.26
RTP3Q9BQQ7 RNU6-915P-201ENST00000364943 103 ntBASIC0.92□□□□□ -2.26
RTP3Q9BQQ7 Y_RNA.430-201ENST00000384081 110 ntBASIC0.92□□□□□ -2.26
RTP3Q9BQQ7 Y_RNA.506-201ENST00000384494 102 ntBASIC0.92□□□□□ -2.26
RTP3Q9BQQ7 SNORD111-201ENST00000408139 94 ntBASIC0.92□□□□□ -2.26
RTP3Q9BQQ7 Y_RNA.651-201ENST00000459380 103 ntBASIC0.92□□□□□ -2.26
RTP3Q9BQQ7 MIR4264-201ENST00000583520 66 ntBASIC0.92□□□□□ -2.26
RTP3Q9BQQ7 Y_RNA.168-201ENST00000363740 102 ntBASIC0.91□□□□□ -2.26
RTP3Q9BQQ7 RNU6-580P-201ENST00000365159 107 ntBASIC0.91□□□□□ -2.26
RTP3Q9BQQ7 RNU6-690P-201ENST00000365242 106 ntBASIC0.91□□□□□ -2.26
RTP3Q9BQQ7 RNU6-1062P-201ENST00000383908 107 ntBASIC0.91□□□□□ -2.26
RTP3Q9BQQ7 Y_RNA.420-201ENST00000384043 110 ntBASIC0.91□□□□□ -2.26
RTP3Q9BQQ7 MIR200A-201ENST00000384875 90 ntBASIC0.91□□□□□ -2.26
RTP3Q9BQQ7 RNU6-240P-201ENST00000516098 97 ntBASIC0.91□□□□□ -2.26
RTP3Q9BQQ7 RNU6-426P-201ENST00000516464 97 ntBASIC0.91□□□□□ -2.26
RTP3Q9BQQ7 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.26
RTP3Q9BQQ7 MIR377-201ENST00000362145 69 ntBASIC0.9□□□□□ -2.27
RTP3Q9BQQ7 SNORA22.1-201ENST00000362701 134 ntBASIC0.9□□□□□ -2.27
RTP3Q9BQQ7 RNU6-1187P-201ENST00000364771 110 ntBASIC0.9□□□□□ -2.27
RTP3Q9BQQ7 SNORD114-24-201ENST00000365029 72 ntBASIC0.9□□□□□ -2.27
RTP3Q9BQQ7 MIR588-201ENST00000384900 83 ntBASIC0.9□□□□□ -2.27
RTP3Q9BQQ7 MIR936-201ENST00000401264 98 ntBASIC0.9□□□□□ -2.27
RTP3Q9BQQ7 AP001328.1-201ENST00000528550 176 ntBASIC0.9□□□□□ -2.27
RTP3Q9BQQ7 AC133485.1-201ENST00000567176 124 ntBASIC0.9□□□□□ -2.27
RTP3Q9BQQ7 AC138907.6-201ENST00000568401 126 ntBASIC0.9□□□□□ -2.27
RTP3Q9BQQ7 RNU6-94P-201ENST00000607728 107 ntBASIC0.9□□□□□ -2.27
RTP3Q9BQQ7 AC011603.4-201ENST00000611325 277 ntBASIC0.9□□□□□ -2.27
RTP3Q9BQQ7 MIR6841-201ENST00000637129 72 ntBASIC0.9□□□□□ -2.27
RTP3Q9BQQ7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
RTP3Q9BQQ7 Y_RNA.85-201ENST00000363014 111 ntBASIC0.89□□□□□ -2.27
RTP3Q9BQQ7 RNU6-774P-201ENST00000363238 107 ntBASIC0.89□□□□□ -2.27
RTP3Q9BQQ7 RNY1P5-201ENST00000383890 115 ntBASIC0.89□□□□□ -2.27
RTP3Q9BQQ7 RNU6-1237P-201ENST00000384777 107 ntBASIC0.89□□□□□ -2.27
RTP3Q9BQQ7 RNU7-62P-201ENST00000458856 62 ntBASIC0.89□□□□□ -2.27
RTP3Q9BQQ7 snoU13.2-201ENST00000459201 104 ntBASIC0.89□□□□□ -2.27
RTP3Q9BQQ7 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.89□□□□□ -2.27
RTP3Q9BQQ7 Y_RNA.692-201ENST00000516627 105 ntBASIC0.89□□□□□ -2.27
RTP3Q9BQQ7 RNU6-1258P-201ENST00000516911 111 ntBASIC0.89□□□□□ -2.27
RTP3Q9BQQ7 Y_RNA.757-201ENST00000578934 114 ntBASIC0.89□□□□□ -2.27
RTP3Q9BQQ7 MIR3121-201ENST00000579680 77 ntBASIC0.89□□□□□ -2.27
RTP3Q9BQQ7 MIR6740-201ENST00000618268 113 ntBASIC0.89□□□□□ -2.27
RTP3Q9BQQ7 AP001340.1-201ENST00000624405 217 ntBASIC0.89□□□□□ -2.27
RTP3Q9BQQ7 Y_RNA.171-201ENST00000363760 102 ntBASIC0.88□□□□□ -2.27
RTP3Q9BQQ7 Y_RNA.343-201ENST00000365354 112 ntBASIC0.88□□□□□ -2.27
RTP3Q9BQQ7 Y_RNA.433-201ENST00000384089 102 ntBASIC0.88□□□□□ -2.27
RTP3Q9BQQ7 MIR942-201ENST00000401111 86 ntBASIC0.88□□□□□ -2.27
RTP3Q9BQQ7 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.88□□□□□ -2.27
RTP3Q9BQQ7 RNA5SP144-201ENST00000410846 116 ntBASIC0.88□□□□□ -2.27
RTP3Q9BQQ7 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.88□□□□□ -2.27
RTP3Q9BQQ7 RNU6-893P-201ENST00000458841 100 ntBASIC0.88□□□□□ -2.27
RTP3Q9BQQ7 snoU13.21-201ENST00000459368 105 ntBASIC0.88□□□□□ -2.27
RTP3Q9BQQ7 AC133485.4-201ENST00000561835 220 ntBASIC0.88□□□□□ -2.27
RTP3Q9BQQ7 AC138907.4-201ENST00000570107 226 ntBASIC0.88□□□□□ -2.27
RTP3Q9BQQ7 MIR3133-201ENST00000583157 78 ntBASIC0.88□□□□□ -2.27
RTP3Q9BQQ7 AC010332.2-201ENST00000613083 1904 ntBASIC0.87□□□□□ -2.27
RTP3Q9BQQ7 Y_RNA.294-201ENST00000364916 102 ntBASIC0.87□□□□□ -2.27
RTP3Q9BQQ7 RNU1-36P-201ENST00000365130 165 ntBASIC0.87□□□□□ -2.27
RTP3Q9BQQ7 RNA5SP330-201ENST00000517096 96 ntBASIC0.87□□□□□ -2.27
RTP3Q9BQQ7 MIR4305-201ENST00000583252 102 ntBASIC0.87□□□□□ -2.27
RTP3Q9BQQ7 AC108081.1-201ENST00000604358 221 ntBASIC0.87□□□□□ -2.27
RTP3Q9BQQ7 AC021443.1-201ENST00000604478 211 ntBASIC0.87□□□□□ -2.27
RTP3Q9BQQ7 uc_338.6-201ENST00000613544 171 ntBASIC0.87□□□□□ -2.27
RTP3Q9BQQ7 Y_RNA.366-201ENST00000365540 102 ntBASIC0.86□□□□□ -2.27
RTP3Q9BQQ7 Y_RNA.568-201ENST00000384742 113 ntBASIC0.86□□□□□ -2.27
RTP3Q9BQQ7 RNU6-994P-201ENST00000410507 111 ntBASIC0.86□□□□□ -2.27
RTP3Q9BQQ7 SNORD83.1-201ENST00000411362 77 ntBASIC0.86□□□□□ -2.27
RTP3Q9BQQ7 AL022718.1-201ENST00000412004 84 ntBASIC0.86□□□□□ -2.27
RTP3Q9BQQ7 AL512326.2-201ENST00000426359 151 ntBASIC0.86□□□□□ -2.27
RTP3Q9BQQ7 FABP5P4-201ENST00000437203 171 ntBASIC0.86□□□□□ -2.27
RTP3Q9BQQ7 AC113410.1-201ENST00000505029 247 ntBASIC0.86□□□□□ -2.27
RTP3Q9BQQ7 RNU2-35P-201ENST00000516446 142 ntBASIC0.86□□□□□ -2.27
RTP3Q9BQQ7 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.86□□□□□ -2.27
RTP3Q9BQQ7 AL109933.3-201ENST00000619095 188 ntBASIC0.86□□□□□ -2.27
RTP3Q9BQQ7 Y_RNA.114-201ENST00000363265 113 ntBASIC0.85□□□□□ -2.27
RTP3Q9BQQ7 RNU6-934P-201ENST00000365154 107 ntBASIC0.85□□□□□ -2.27
RTP3Q9BQQ7 RNU6-1165P-201ENST00000410119 107 ntBASIC0.85□□□□□ -2.27
RTP3Q9BQQ7 MTND4LP9-201ENST00000427694 174 ntBASIC0.85□□□□□ -2.27
RTP3Q9BQQ7 RNU7-164P-201ENST00000459221 62 ntBASIC0.85□□□□□ -2.27
RTP3Q9BQQ7 RNU7-113P-201ENST00000459273 62 ntBASIC0.85□□□□□ -2.27
RTP3Q9BQQ7 RNU6-351P-201ENST00000516097 100 ntBASIC0.85□□□□□ -2.27
RTP3Q9BQQ7 MIR6835-201ENST00000621552 64 ntBASIC0.85□□□□□ -2.27
RTP3Q9BQQ7 RNU6-746P-201ENST00000384112 109 ntBASIC0.84□□□□□ -2.27
RTP3Q9BQQ7 Y_RNA.470-201ENST00000384307 117 ntBASIC0.84□□□□□ -2.27
RTP3Q9BQQ7 MIR563-201ENST00000385080 79 ntBASIC0.84□□□□□ -2.27
RTP3Q9BQQ7 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.84□□□□□ -2.27
RTP3Q9BQQ7 RNU6-257P-201ENST00000410238 98 ntBASIC0.84□□□□□ -2.27
RTP3Q9BQQ7 RNA5SP237-201ENST00000410414 113 ntBASIC0.84□□□□□ -2.27
RTP3Q9BQQ7 AC015818.7-201ENST00000428754 109 ntBASIC0.84□□□□□ -2.27
RTP3Q9BQQ7 AC087499.7-201ENST00000441958 109 ntBASIC0.84□□□□□ -2.27
RTP3Q9BQQ7 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.84□□□□□ -2.27
RTP3Q9BQQ7 PDCD5P2-201ENST00000507570 312 ntBASIC0.84□□□□□ -2.27
RTP3Q9BQQ7 RNA5SP255-201ENST00000516370 107 ntBASIC0.84□□□□□ -2.27
RTP3Q9BQQ7 Y_RNA.703-201ENST00000516846 111 ntBASIC0.84□□□□□ -2.27
RTP3Q9BQQ7 AC004812.1-201ENST00000540773 146 ntBASIC0.84□□□□□ -2.27
RTP3Q9BQQ7 U7.2-201ENST00000607576 63 ntBASIC0.84□□□□□ -2.27
RTP3Q9BQQ7 AL137067.1-201ENST00000615933 120 ntBASIC0.84□□□□□ -2.27
RTP3Q9BQQ7 MIR30D-201ENST00000362283 70 ntBASIC0.83□□□□□ -2.28
RTP3Q9BQQ7 RNA5SP257-201ENST00000363023 116 ntBASIC0.83□□□□□ -2.28
RTP3Q9BQQ7 SNORA18-201ENST00000384416 132 ntBASIC0.83□□□□□ -2.28
RTP3Q9BQQ7 Y_RNA.531-201ENST00000384589 121 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 162.8 ms