Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 RNU6-499P-201ENST00000365615 107 ntBASIC3.17□□□□□ -1.9
EFCAB3Q8N7B9 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.17□□□□□ -1.9
EFCAB3Q8N7B9 RNA5SP217-201ENST00000515959 91 ntBASIC3.17□□□□□ -1.9
EFCAB3Q8N7B9 Y_RNA.809-201ENST00000516058 95 ntBASIC3.17□□□□□ -1.9
EFCAB3Q8N7B9 MIR8053-201ENST00000613344 75 ntBASIC3.17□□□□□ -1.9
EFCAB3Q8N7B9 uc_338.6-201ENST00000613544 171 ntBASIC3.17□□□□□ -1.9
EFCAB3Q8N7B9 SNORA50A-202ENST00000629536 136 ntBASIC3.17□□□□□ -1.9
EFCAB3Q8N7B9 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
EFCAB3Q8N7B9 AC016717.2-201ENST00000609089 5141 ntBASIC3.16□□□□□ -1.9
EFCAB3Q8N7B9 RNU6-664P-201ENST00000362381 107 ntBASIC3.16□□□□□ -1.9
EFCAB3Q8N7B9 RNU6-1260P-201ENST00000362944 107 ntBASIC3.16□□□□□ -1.9
EFCAB3Q8N7B9 MIR7106-201ENST00000612419 65 ntBASIC3.16□□□□□ -1.9
EFCAB3Q8N7B9 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
EFCAB3Q8N7B9 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
EFCAB3Q8N7B9 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
EFCAB3Q8N7B9 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.15□□□□□ -1.9
EFCAB3Q8N7B9 RNU1-36P-201ENST00000365130 165 ntBASIC3.15□□□□□ -1.91
EFCAB3Q8N7B9 SNORD101-201ENST00000384027 73 ntBASIC3.15□□□□□ -1.91
EFCAB3Q8N7B9 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.15□□□□□ -1.91
EFCAB3Q8N7B9 MIR4529-201ENST00000578110 78 ntBASIC3.15□□□□□ -1.91
EFCAB3Q8N7B9 MIR5004-201ENST00000579078 107 ntBASIC3.15□□□□□ -1.91
EFCAB3Q8N7B9 GHRLOS.1-201ENST00000610995 70 ntBASIC3.15□□□□□ -1.91
EFCAB3Q8N7B9 AC073476.4-201ENST00000628409 72 ntBASIC3.15□□□□□ -1.91
EFCAB3Q8N7B9 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
EFCAB3Q8N7B9 MIR422A-201ENST00000362286 90 ntBASIC3.14□□□□□ -1.91
EFCAB3Q8N7B9 RNU6-403P-201ENST00000363163 104 ntBASIC3.14□□□□□ -1.91
EFCAB3Q8N7B9 SNORA5B-201ENST00000363786 132 ntBASIC3.14□□□□□ -1.91
EFCAB3Q8N7B9 JTBP1-201ENST00000441314 247 ntBASIC3.14□□□□□ -1.91
EFCAB3Q8N7B9 S100A11P2-201ENST00000467589 312 ntBASIC3.14□□□□□ -1.91
EFCAB3Q8N7B9 AC097510.1-201ENST00000510945 133 ntBASIC3.14□□□□□ -1.91
EFCAB3Q8N7B9 MIR4696-201ENST00000581431 70 ntBASIC3.14□□□□□ -1.91
EFCAB3Q8N7B9 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.14□□□□□ -1.91
EFCAB3Q8N7B9 uc_338.1-201ENST00000612113 180 ntBASIC3.14□□□□□ -1.91
EFCAB3Q8N7B9 MIR6516-201ENST00000630554 81 ntBASIC3.14□□□□□ -1.91
EFCAB3Q8N7B9 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
EFCAB3Q8N7B9 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.13□□□□□ -1.91
EFCAB3Q8N7B9 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
EFCAB3Q8N7B9 Y_RNA.56-201ENST00000362798 112 ntBASIC3.13□□□□□ -1.91
EFCAB3Q8N7B9 Y_RNA.443-201ENST00000384135 111 ntBASIC3.13□□□□□ -1.91
EFCAB3Q8N7B9 MIR9-2-201ENST00000384838 87 ntBASIC3.13□□□□□ -1.91
EFCAB3Q8N7B9 U8.13-201ENST00000390842 128 ntBASIC3.13□□□□□ -1.91
EFCAB3Q8N7B9 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.13□□□□□ -1.91
EFCAB3Q8N7B9 RNU2-19P-201ENST00000517288 84 ntBASIC3.13□□□□□ -1.91
EFCAB3Q8N7B9 SNRPGP19-201ENST00000603826 189 ntBASIC3.13□□□□□ -1.91
EFCAB3Q8N7B9 DLEU2_3.1-201ENST00000620005 73 ntBASIC3.13□□□□□ -1.91
EFCAB3Q8N7B9 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
EFCAB3Q8N7B9 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.12□□□□□ -1.91
EFCAB3Q8N7B9 ZNF209P-201ENST00000593450 2304 ntBASIC3.12□□□□□ -1.91
EFCAB3Q8N7B9 RNU6-580P-201ENST00000365159 107 ntBASIC3.12□□□□□ -1.91
EFCAB3Q8N7B9 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
EFCAB3Q8N7B9 AL133373.1-201ENST00000497098 94 ntBASIC3.12□□□□□ -1.91
EFCAB3Q8N7B9 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.12□□□□□ -1.91
EFCAB3Q8N7B9 RNU6-250P-201ENST00000516958 103 ntBASIC3.12□□□□□ -1.91
EFCAB3Q8N7B9 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
EFCAB3Q8N7B9 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
EFCAB3Q8N7B9 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
EFCAB3Q8N7B9 SNORA46-201ENST00000384762 135 ntBASIC3.11□□□□□ -1.91
EFCAB3Q8N7B9 RNU4-47P-201ENST00000410876 114 ntBASIC3.11□□□□□ -1.91
EFCAB3Q8N7B9 AL606490.4-201ENST00000423117 127 ntBASIC3.11□□□□□ -1.91
EFCAB3Q8N7B9 RN7SL20P-201ENST00000488827 297 ntBASIC3.11□□□□□ -1.91
EFCAB3Q8N7B9 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.11□□□□□ -1.91
EFCAB3Q8N7B9 MIR514B-201ENST00000516774 80 ntBASIC3.11□□□□□ -1.91
EFCAB3Q8N7B9 RNU6-56P-201ENST00000516986 93 ntBASIC3.11□□□□□ -1.91
EFCAB3Q8N7B9 RNA5SP380-201ENST00000517190 98 ntBASIC3.11□□□□□ -1.91
EFCAB3Q8N7B9 SNORA31.25-201ENST00000517242 134 ntBASIC3.11□□□□□ -1.91
EFCAB3Q8N7B9 AP003716.2-201ENST00000528260 108 ntBASIC3.11□□□□□ -1.91
EFCAB3Q8N7B9 AC013244.2-201ENST00000603396 103 ntBASIC3.11□□□□□ -1.91
EFCAB3Q8N7B9 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.11□□□□□ -1.91
EFCAB3Q8N7B9 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.11□□□□□ -1.91
EFCAB3Q8N7B9 AC092185.1-201ENST00000491371 97 ntBASIC3.1□□□□□ -1.91
EFCAB3Q8N7B9 MIR3140-201ENST00000583685 90 ntBASIC3.1□□□□□ -1.91
EFCAB3Q8N7B9 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC3.1□□□□□ -1.91
EFCAB3Q8N7B9 MTRNR2L2-201ENST00000604882 87 ntBASIC3.1□□□□□ -1.91
EFCAB3Q8N7B9 U6.81-201ENST00000612550 106 ntBASIC3.1□□□□□ -1.91
EFCAB3Q8N7B9 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
EFCAB3Q8N7B9 SNORD45A-201ENST00000384512 84 ntBASIC3.09□□□□□ -1.91
EFCAB3Q8N7B9 RNA5SP229-201ENST00000410809 99 ntBASIC3.09□□□□□ -1.91
EFCAB3Q8N7B9 AC092628.1-201ENST00000436250 252 ntBASIC3.09□□□□□ -1.91
EFCAB3Q8N7B9 RN7SL429P-201ENST00000479090 223 ntBASIC3.09□□□□□ -1.91
EFCAB3Q8N7B9 RN7SL489P-201ENST00000486185 223 ntBASIC3.09□□□□□ -1.91
EFCAB3Q8N7B9 RN7SL327P-201ENST00000488659 223 ntBASIC3.09□□□□□ -1.91
EFCAB3Q8N7B9 RNU6-881P-201ENST00000516813 102 ntBASIC3.09□□□□□ -1.91
EFCAB3Q8N7B9 MIR5089-201ENST00000580047 84 ntBASIC3.09□□□□□ -1.91
EFCAB3Q8N7B9 AL627230.6-201ENST00000611129 280 ntBASIC3.09□□□□□ -1.91
EFCAB3Q8N7B9 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
EFCAB3Q8N7B9 RN7SL853P-201ENST00000617250 223 ntBASIC3.09□□□□□ -1.91
EFCAB3Q8N7B9 AC103706.3-201ENST00000636297 85 ntBASIC3.09□□□□□ -1.91
EFCAB3Q8N7B9 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
EFCAB3Q8N7B9 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
EFCAB3Q8N7B9 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
EFCAB3Q8N7B9 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
EFCAB3Q8N7B9 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
EFCAB3Q8N7B9 SNORD45.1-201ENST00000363181 77 ntBASIC3.08□□□□□ -1.92
EFCAB3Q8N7B9 SNORA80A-201ENST00000363922 136 ntBASIC3.08□□□□□ -1.92
EFCAB3Q8N7B9 SNORA24B-201ENST00000384176 131 ntBASIC3.08□□□□□ -1.92
EFCAB3Q8N7B9 RNU6-301P-201ENST00000384277 107 ntBASIC3.08□□□□□ -1.92
EFCAB3Q8N7B9 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.08□□□□□ -1.92
EFCAB3Q8N7B9 UQCRHP3-201ENST00000451503 251 ntBASIC3.08□□□□□ -1.92
EFCAB3Q8N7B9 snoU13.25-201ENST00000458945 104 ntBASIC3.08□□□□□ -1.92
EFCAB3Q8N7B9 AL137790.1-201ENST00000634283 177 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 661.6 ms