Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 Y_RNA.556-201ENST00000384677 113 ntBASIC0.32□□□□□ -2.36
PRPF39Q86UA1 U8.15-201ENST00000390947 134 ntBASIC0.32□□□□□ -2.36
PRPF39Q86UA1 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.32□□□□□ -2.36
PRPF39Q86UA1 RNA5SP457-201ENST00000363657 124 ntBASIC0.31□□□□□ -2.36
PRPF39Q86UA1 Y_RNA.258-201ENST00000364613 105 ntBASIC0.31□□□□□ -2.36
PRPF39Q86UA1 RNY4P28-201ENST00000365281 93 ntBASIC0.31□□□□□ -2.36
PRPF39Q86UA1 SNORA8.2-201ENST00000384372 139 ntBASIC0.31□□□□□ -2.36
PRPF39Q86UA1 MIR624-201ENST00000385217 97 ntBASIC0.31□□□□□ -2.36
PRPF39Q86UA1 SNORA62.5-201ENST00000516634 120 ntBASIC0.31□□□□□ -2.36
PRPF39Q86UA1 MIR6082-201ENST00000613604 109 ntBASIC0.31□□□□□ -2.36
PRPF39Q86UA1 MIR6841-201ENST00000637129 72 ntBASIC0.31□□□□□ -2.36
PRPF39Q86UA1 Y_RNA.115-201ENST00000363272 98 ntBASIC0.3□□□□□ -2.36
PRPF39Q86UA1 RNU6-1327P-201ENST00000365302 105 ntBASIC0.3□□□□□ -2.36
PRPF39Q86UA1 Y_RNA.477-201ENST00000384352 108 ntBASIC0.3□□□□□ -2.36
PRPF39Q86UA1 Y_RNA.521-201ENST00000384560 114 ntBASIC0.3□□□□□ -2.36
PRPF39Q86UA1 Y_RNA.571-201ENST00000384753 98 ntBASIC0.3□□□□□ -2.36
PRPF39Q86UA1 RNU5E-9P-201ENST00000411164 104 ntBASIC0.3□□□□□ -2.36
PRPF39Q86UA1 MTND2P23-201ENST00000422990 651 ntBASIC0.3□□□□□ -2.36
PRPF39Q86UA1 MIR103A1-201ENST00000362165 78 ntBASIC0.29□□□□□ -2.36
PRPF39Q86UA1 RNU6-949P-201ENST00000384040 107 ntBASIC0.29□□□□□ -2.36
PRPF39Q86UA1 MIR644A-201ENST00000385262 94 ntBASIC0.29□□□□□ -2.36
PRPF39Q86UA1 AL512326.2-201ENST00000426359 151 ntBASIC0.29□□□□□ -2.36
PRPF39Q86UA1 SNRPGP12-201ENST00000449481 213 ntBASIC0.29□□□□□ -2.36
PRPF39Q86UA1 MIR4491-201ENST00000581087 68 ntBASIC0.29□□□□□ -2.36
PRPF39Q86UA1 RNA5SP62-201ENST00000363457 110 ntBASIC0.28□□□□□ -2.36
PRPF39Q86UA1 RNU6-716P-201ENST00000365621 103 ntBASIC0.28□□□□□ -2.36
PRPF39Q86UA1 MIR1197-201ENST00000408818 88 ntBASIC0.28□□□□□ -2.36
PRPF39Q86UA1 SCARNA15-202ENST00000516881 127 ntBASIC0.28□□□□□ -2.36
PRPF39Q86UA1 MIR4514-201ENST00000581410 57 ntBASIC0.28□□□□□ -2.36
PRPF39Q86UA1 AL360085.1-201ENST00000604713 532 ntBASIC0.28□□□□□ -2.36
PRPF39Q86UA1 SNORD44.1-201ENST00000363202 61 ntBASIC0.27□□□□□ -2.37
PRPF39Q86UA1 SNORD118-201ENST00000363593 134 ntBASIC0.27□□□□□ -2.37
PRPF39Q86UA1 Y_RNA.174-201ENST00000363781 105 ntBASIC0.27□□□□□ -2.37
PRPF39Q86UA1 RNU6-1229P-201ENST00000364295 107 ntBASIC0.27□□□□□ -2.37
PRPF39Q86UA1 Y_RNA.562-201ENST00000384695 113 ntBASIC0.27□□□□□ -2.37
PRPF39Q86UA1 Y_RNA.626-201ENST00000411288 95 ntBASIC0.27□□□□□ -2.37
PRPF39Q86UA1 Y_RNA.697-201ENST00000516776 113 ntBASIC0.27□□□□□ -2.37
PRPF39Q86UA1 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.27□□□□□ -2.37
PRPF39Q86UA1 RNU6-1099P-201ENST00000363533 107 ntBASIC0.26□□□□□ -2.37
PRPF39Q86UA1 RNY1P6-201ENST00000384193 109 ntBASIC0.26□□□□□ -2.37
PRPF39Q86UA1 Y_RNA.588-201ENST00000391254 102 ntBASIC0.26□□□□□ -2.37
PRPF39Q86UA1 MTCYBP9-201ENST00000431021 303 ntBASIC0.26□□□□□ -2.37
PRPF39Q86UA1 RNU6-765P-201ENST00000516916 99 ntBASIC0.26□□□□□ -2.37
PRPF39Q86UA1 DEFB131E-201ENST00000532329 154 ntBASIC0.26□□□□□ -2.37
PRPF39Q86UA1 MTND5P32-201ENST00000560711 1802 ntBASIC0.26□□□□□ -2.37
PRPF39Q86UA1 RNU6-275P-201ENST00000364910 107 ntBASIC0.25□□□□□ -2.37
PRPF39Q86UA1 Y_RNA.350-201ENST00000365409 98 ntBASIC0.25□□□□□ -2.37
PRPF39Q86UA1 RNU6-327P-201ENST00000516270 127 ntBASIC0.25□□□□□ -2.37
PRPF39Q86UA1 MIR4308-201ENST00000580634 81 ntBASIC0.25□□□□□ -2.37
PRPF39Q86UA1 AL109933.3-201ENST00000619095 188 ntBASIC0.25□□□□□ -2.37
PRPF39Q86UA1 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.25□□□□□ -2.37
PRPF39Q86UA1 RNU6-349P-201ENST00000362402 107 ntBASIC0.24□□□□□ -2.37
PRPF39Q86UA1 Y_RNA.85-201ENST00000363014 111 ntBASIC0.24□□□□□ -2.37
PRPF39Q86UA1 Y_RNA.478-201ENST00000384358 107 ntBASIC0.24□□□□□ -2.37
PRPF39Q86UA1 RNU6-1086P-201ENST00000410930 100 ntBASIC0.24□□□□□ -2.37
PRPF39Q86UA1 AL022718.1-201ENST00000412004 84 ntBASIC0.24□□□□□ -2.37
PRPF39Q86UA1 AC073261.1-201ENST00000429409 121 ntBASIC0.24□□□□□ -2.37
PRPF39Q86UA1 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.24□□□□□ -2.37
PRPF39Q86UA1 RNU6-135P-201ENST00000516769 101 ntBASIC0.24□□□□□ -2.37
PRPF39Q86UA1 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
PRPF39Q86UA1 Y_RNA.757-201ENST00000578934 114 ntBASIC0.24□□□□□ -2.37
PRPF39Q86UA1 AC023932.2-201ENST00000603176 175 ntBASIC0.24□□□□□ -2.37
PRPF39Q86UA1 Y_RNA.20-201ENST00000362479 113 ntBASIC0.23□□□□□ -2.37
PRPF39Q86UA1 Y_RNA.32-201ENST00000362589 110 ntBASIC0.23□□□□□ -2.37
PRPF39Q86UA1 RNY1P13-201ENST00000365030 105 ntBASIC0.23□□□□□ -2.37
PRPF39Q86UA1 RNU6-535P-201ENST00000384722 107 ntBASIC0.23□□□□□ -2.37
PRPF39Q86UA1 RNU7-113P-201ENST00000459273 62 ntBASIC0.23□□□□□ -2.37
PRPF39Q86UA1 SNORA31.14-201ENST00000516728 116 ntBASIC0.23□□□□□ -2.37
PRPF39Q86UA1 RNA5SP268-201ENST00000516828 124 ntBASIC0.23□□□□□ -2.37
PRPF39Q86UA1 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
PRPF39Q86UA1 Y_RNA.536-201ENST00000384621 113 ntBASIC0.22□□□□□ -2.37
PRPF39Q86UA1 AC108740.1-201ENST00000498629 225 ntBASIC0.22□□□□□ -2.37
PRPF39Q86UA1 RNU6-863P-201ENST00000515989 104 ntBASIC0.22□□□□□ -2.37
PRPF39Q86UA1 RNU4-71P-201ENST00000516258 113 ntBASIC0.22□□□□□ -2.37
PRPF39Q86UA1 SNORA25.16-201ENST00000516741 121 ntBASIC0.22□□□□□ -2.37
PRPF39Q86UA1 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.22□□□□□ -2.37
PRPF39Q86UA1 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.22□□□□□ -2.37
PRPF39Q86UA1 SNORA36.1-201ENST00000363424 132 ntBASIC0.21□□□□□ -2.38
PRPF39Q86UA1 Y_RNA.171-201ENST00000363760 102 ntBASIC0.21□□□□□ -2.38
PRPF39Q86UA1 Y_RNA.539-201ENST00000384635 107 ntBASIC0.21□□□□□ -2.38
PRPF39Q86UA1 AL118496.2-201ENST00000448300 230 ntBASIC0.21□□□□□ -2.38
PRPF39Q86UA1 RNU7-79P-201ENST00000516082 62 ntBASIC0.21□□□□□ -2.38
PRPF39Q86UA1 RNA5SP227-201ENST00000516184 113 ntBASIC0.21□□□□□ -2.38
PRPF39Q86UA1 RNU6-1194P-201ENST00000516208 104 ntBASIC0.21□□□□□ -2.38
PRPF39Q86UA1 U6.106-201ENST00000636360 105 ntBASIC0.21□□□□□ -2.38
PRPF39Q86UA1 RNU6-694P-201ENST00000364071 147 ntBASIC0.2□□□□□ -2.38
PRPF39Q86UA1 RNU4-67P-201ENST00000364569 141 ntBASIC0.2□□□□□ -2.38
PRPF39Q86UA1 RNU6-1336P-201ENST00000383886 109 ntBASIC0.2□□□□□ -2.38
PRPF39Q86UA1 Y_RNA.412-201ENST00000384001 104 ntBASIC0.2□□□□□ -2.38
PRPF39Q86UA1 RNU2-59P-201ENST00000410482 191 ntBASIC0.2□□□□□ -2.38
PRPF39Q86UA1 SUMO1P3-201ENST00000439961 304 ntBASIC0.2□□□□□ -2.38
PRPF39Q86UA1 RNA5SP33-201ENST00000516687 98 ntBASIC0.2□□□□□ -2.38
PRPF39Q86UA1 MRPS18CP4-201ENST00000535821 231 ntBASIC0.2□□□□□ -2.38
PRPF39Q86UA1 MTND5P34-201ENST00000568888 325 ntBASIC0.2□□□□□ -2.38
PRPF39Q86UA1 MIR3128-201ENST00000581957 66 ntBASIC0.2□□□□□ -2.38
PRPF39Q86UA1 AC062037.2-201ENST00000610137 73 ntBASIC0.2□□□□□ -2.38
PRPF39Q86UA1 Y_RNA.75-201ENST00000362927 97 ntBASIC0.19□□□□□ -2.38
PRPF39Q86UA1 SNORA20.1-201ENST00000364790 130 ntBASIC0.19□□□□□ -2.38
PRPF39Q86UA1 RNU6-291P-201ENST00000384720 107 ntBASIC0.19□□□□□ -2.38
PRPF39Q86UA1 RNA5SP63-201ENST00000391225 112 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 228.1 ms