Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 RNU6-1064P-201ENST00000410626 104 ntBASIC1.6□□□□□ -2.15
DDX53Q86TM3 RNU6-970P-201ENST00000516312 107 ntBASIC1.6□□□□□ -2.15
DDX53Q86TM3 MIR4452-201ENST00000583004 71 ntBASIC1.6□□□□□ -2.15
DDX53Q86TM3 MIR4264-201ENST00000583520 66 ntBASIC1.6□□□□□ -2.15
DDX53Q86TM3 AL078603.1-201ENST00000603824 313 ntBASIC1.6□□□□□ -2.15
DDX53Q86TM3 SEPT14P17-201ENST00000617978 177 ntBASIC1.6□□□□□ -2.15
DDX53Q86TM3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
DDX53Q86TM3 Y_RNA.299-201ENST00000364973 94 ntBASIC1.59□□□□□ -2.15
DDX53Q86TM3 RNU6-1056P-201ENST00000383996 107 ntBASIC1.59□□□□□ -2.15
DDX53Q86TM3 RNU6-1144P-201ENST00000384247 104 ntBASIC1.59□□□□□ -2.15
DDX53Q86TM3 MT-TN-201ENST00000387400 73 ntBASIC1.59□□□□□ -2.15
DDX53Q86TM3 RNU6-613P-201ENST00000410412 108 ntBASIC1.59□□□□□ -2.15
DDX53Q86TM3 RNU4-69P-201ENST00000410677 143 ntBASIC1.59□□□□□ -2.15
DDX53Q86TM3 Y_RNA.629-201ENST00000411368 105 ntBASIC1.59□□□□□ -2.15
DDX53Q86TM3 RNU1-98P-201ENST00000458992 160 ntBASIC1.59□□□□□ -2.15
DDX53Q86TM3 RNU7-6P-201ENST00000516845 62 ntBASIC1.59□□□□□ -2.15
DDX53Q86TM3 MIR3163-201ENST00000581592 73 ntBASIC1.59□□□□□ -2.15
DDX53Q86TM3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.59□□□□□ -2.15
DDX53Q86TM3 RNU6-834P-201ENST00000362367 110 ntBASIC1.58□□□□□ -2.16
DDX53Q86TM3 MIR588-201ENST00000384900 83 ntBASIC1.58□□□□□ -2.16
DDX53Q86TM3 AL354695.1-201ENST00000427935 228 ntBASIC1.58□□□□□ -2.16
DDX53Q86TM3 snoU13.2-201ENST00000459201 104 ntBASIC1.58□□□□□ -2.16
DDX53Q86TM3 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.58□□□□□ -2.16
DDX53Q86TM3 RNA5SP220-201ENST00000516298 104 ntBASIC1.58□□□□□ -2.16
DDX53Q86TM3 RMST_2.1-201ENST00000617263 136 ntBASIC1.58□□□□□ -2.16
DDX53Q86TM3 MIR6734-201ENST00000621166 68 ntBASIC1.58□□□□□ -2.16
DDX53Q86TM3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
DDX53Q86TM3 RNA5SP237-201ENST00000410414 113 ntBASIC1.57□□□□□ -2.16
DDX53Q86TM3 MIR6129-201ENST00000616087 109 ntBASIC1.57□□□□□ -2.16
DDX53Q86TM3 MIR6740-201ENST00000618268 113 ntBASIC1.57□□□□□ -2.16
DDX53Q86TM3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
DDX53Q86TM3 SNORD116-21-201ENST00000384507 92 ntBASIC1.56□□□□□ -2.16
DDX53Q86TM3 MIR1304-201ENST00000408243 91 ntBASIC1.56□□□□□ -2.16
DDX53Q86TM3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.56□□□□□ -2.16
DDX53Q86TM3 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.56□□□□□ -2.16
DDX53Q86TM3 AL591704.2-201ENST00000421658 181 ntBASIC1.56□□□□□ -2.16
DDX53Q86TM3 RNU7-62P-201ENST00000458856 62 ntBASIC1.56□□□□□ -2.16
DDX53Q86TM3 AC007012.1-201ENST00000567192 175 ntBASIC1.56□□□□□ -2.16
DDX53Q86TM3 MIR377-201ENST00000362145 69 ntBASIC1.55□□□□□ -2.16
DDX53Q86TM3 RNY4P6-201ENST00000363667 96 ntBASIC1.55□□□□□ -2.16
DDX53Q86TM3 RNA5SP363-201ENST00000365072 115 ntBASIC1.55□□□□□ -2.16
DDX53Q86TM3 SNORA80D-201ENST00000384488 135 ntBASIC1.55□□□□□ -2.16
DDX53Q86TM3 SNORA2B-201ENST00000384583 137 ntBASIC1.55□□□□□ -2.16
DDX53Q86TM3 RNU6-997P-201ENST00000384725 107 ntBASIC1.55□□□□□ -2.16
DDX53Q86TM3 MIR1270-201ENST00000459320 83 ntBASIC1.55□□□□□ -2.16
DDX53Q86TM3 AC023790.1-201ENST00000482174 347 ntBASIC1.55□□□□□ -2.16
DDX53Q86TM3 SNORA70.22-201ENST00000517160 124 ntBASIC1.55□□□□□ -2.16
DDX53Q86TM3 AL157834.3-201ENST00000615543 103 ntBASIC1.55□□□□□ -2.16
DDX53Q86TM3 AC087741.2-201ENST00000619415 172 ntBASIC1.55□□□□□ -2.16
DDX53Q86TM3 AL353770.2-201ENST00000620024 78 ntBASIC1.55□□□□□ -2.16
DDX53Q86TM3 RNA5SP327-201ENST00000362494 101 ntBASIC1.54□□□□□ -2.16
DDX53Q86TM3 RNU6-429P-201ENST00000384582 108 ntBASIC1.54□□□□□ -2.16
DDX53Q86TM3 MIR548D2-201ENST00000384955 97 ntBASIC1.54□□□□□ -2.16
DDX53Q86TM3 RNU1-123P-201ENST00000458950 160 ntBASIC1.54□□□□□ -2.16
DDX53Q86TM3 RNU7-21P-201ENST00000459430 62 ntBASIC1.54□□□□□ -2.16
DDX53Q86TM3 SNORD79.1-201ENST00000516069 84 ntBASIC1.54□□□□□ -2.16
DDX53Q86TM3 RNA5SP102-201ENST00000516865 106 ntBASIC1.54□□□□□ -2.16
DDX53Q86TM3 RNU7-35P-201ENST00000517174 62 ntBASIC1.54□□□□□ -2.16
DDX53Q86TM3 Y_RNA.35-201ENST00000362601 101 ntBASIC1.53□□□□□ -2.16
DDX53Q86TM3 SNORD77B-201ENST00000391112 67 ntBASIC1.53□□□□□ -2.16
DDX53Q86TM3 RNU6-1086P-201ENST00000410930 100 ntBASIC1.53□□□□□ -2.16
DDX53Q86TM3 MRPL35P3-201ENST00000421557 364 ntBASIC1.53□□□□□ -2.16
DDX53Q86TM3 RNU7-79P-201ENST00000516082 62 ntBASIC1.53□□□□□ -2.16
DDX53Q86TM3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.53□□□□□ -2.16
DDX53Q86TM3 AC023827.1-201ENST00000569247 97 ntBASIC1.53□□□□□ -2.16
DDX53Q86TM3 uc_338.6-201ENST00000613544 171 ntBASIC1.53□□□□□ -2.16
DDX53Q86TM3 AL662814.1-201ENST00000617364 121 ntBASIC1.53□□□□□ -2.16
DDX53Q86TM3 Y_RNA.168-201ENST00000363740 102 ntBASIC1.52□□□□□ -2.17
DDX53Q86TM3 RNA5SP325-201ENST00000363756 130 ntBASIC1.52□□□□□ -2.17
DDX53Q86TM3 Y_RNA.344-201ENST00000365381 112 ntBASIC1.52□□□□□ -2.17
DDX53Q86TM3 Y_RNA.362-201ENST00000365518 110 ntBASIC1.52□□□□□ -2.17
DDX53Q86TM3 RNU6-880P-201ENST00000384526 107 ntBASIC1.52□□□□□ -2.17
DDX53Q86TM3 Y_RNA.549-201ENST00000384657 102 ntBASIC1.52□□□□□ -2.17
DDX53Q86TM3 MIR222-201ENST00000384992 110 ntBASIC1.52□□□□□ -2.17
DDX53Q86TM3 RNU6-1165P-201ENST00000410119 107 ntBASIC1.52□□□□□ -2.17
DDX53Q86TM3 AC141846.1-201ENST00000568348 142 ntBASIC1.52□□□□□ -2.17
DDX53Q86TM3 AL035470.1-201ENST00000622571 220 ntBASIC1.52□□□□□ -2.17
DDX53Q86TM3 AC008163.1-202ENST00000636004 2889 ntBASIC1.51□□□□□ -2.17
DDX53Q86TM3 SNORD114-26-201ENST00000363543 72 ntBASIC1.51□□□□□ -2.17
DDX53Q86TM3 RNU6-1325P-201ENST00000364905 105 ntBASIC1.51□□□□□ -2.17
DDX53Q86TM3 RNU6-580P-201ENST00000365159 107 ntBASIC1.51□□□□□ -2.17
DDX53Q86TM3 SNORD20-201ENST00000384550 80 ntBASIC1.51□□□□□ -2.17
DDX53Q86TM3 MIR563-201ENST00000385080 79 ntBASIC1.51□□□□□ -2.17
DDX53Q86TM3 AC036111.3-201ENST00000526389 112 ntBASIC1.51□□□□□ -2.17
DDX53Q86TM3 MIR6779-201ENST00000617283 64 ntBASIC1.51□□□□□ -2.17
DDX53Q86TM3 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.51□□□□□ -2.17
DDX53Q86TM3 AL391516.1-201ENST00000554380 2449 ntBASIC1.51□□□□□ -2.17
DDX53Q86TM3 SNORD113.3-201ENST00000364630 78 ntBASIC1.5□□□□□ -2.17
DDX53Q86TM3 SNORD114-22-201ENST00000365423 72 ntBASIC1.5□□□□□ -2.17
DDX53Q86TM3 RNU6-616P-201ENST00000384353 107 ntBASIC1.5□□□□□ -2.17
DDX53Q86TM3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.5□□□□□ -2.17
DDX53Q86TM3 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.5□□□□□ -2.17
DDX53Q86TM3 RNU7-90P-201ENST00000459216 62 ntBASIC1.5□□□□□ -2.17
DDX53Q86TM3 Y_RNA.773-201ENST00000607168 90 ntBASIC1.5□□□□□ -2.17
DDX53Q86TM3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
DDX53Q86TM3 MIR30D-201ENST00000362283 70 ntBASIC1.49□□□□□ -2.17
DDX53Q86TM3 SNORD115-19-201ENST00000363098 82 ntBASIC1.49□□□□□ -2.17
DDX53Q86TM3 SNORD115-18-201ENST00000363293 82 ntBASIC1.49□□□□□ -2.17
DDX53Q86TM3 SNORA63.5-201ENST00000363548 123 ntBASIC1.49□□□□□ -2.17
DDX53Q86TM3 SNORD115-17-201ENST00000364612 82 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 268.5 ms