Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 MIR4648-201ENST00000580107 72 ntBASIC1.95□□□□□ -2.1
RNF111Q6ZNA4 MIR4439-201ENST00000583746 80 ntBASIC1.95□□□□□ -2.1
RNF111Q6ZNA4 AC242498.1-201ENST00000604134 111 ntBASIC1.95□□□□□ -2.1
RNF111Q6ZNA4 AC103810.7-201ENST00000607821 91 ntBASIC1.95□□□□□ -2.1
RNF111Q6ZNA4 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.95□□□□□ -2.1
RNF111Q6ZNA4 SEPT14P17-201ENST00000617978 177 ntBASIC1.95□□□□□ -2.1
RNF111Q6ZNA4 MIR8063-201ENST00000621930 81 ntBASIC1.95□□□□□ -2.1
RNF111Q6ZNA4 MIR219B-201ENST00000637023 88 ntBASIC1.95□□□□□ -2.1
RNF111Q6ZNA4 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
RNF111Q6ZNA4 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
RNF111Q6ZNA4 MIR1261-201ENST00000408659 82 ntBASIC1.94□□□□□ -2.1
RNF111Q6ZNA4 AL445685.2-201ENST00000422551 342 ntBASIC1.94□□□□□ -2.1
RNF111Q6ZNA4 RNU7-48P-201ENST00000458875 63 ntBASIC1.94□□□□□ -2.1
RNF111Q6ZNA4 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.94□□□□□ -2.1
RNF111Q6ZNA4 MIR4713-201ENST00000582691 75 ntBASIC1.94□□□□□ -2.1
RNF111Q6ZNA4 AP000942.3-201ENST00000603702 160 ntBASIC1.94□□□□□ -2.1
RNF111Q6ZNA4 AL357312.1-201ENST00000603879 298 ntBASIC1.94□□□□□ -2.1
RNF111Q6ZNA4 IGLL4P-201ENST00000614590 133 ntBASIC1.94□□□□□ -2.1
RNF111Q6ZNA4 MIR8074-201ENST00000615081 81 ntBASIC1.94□□□□□ -2.1
RNF111Q6ZNA4 AL662814.1-201ENST00000617364 121 ntBASIC1.94□□□□□ -2.1
RNF111Q6ZNA4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.94□□□□□ -2.1
RNF111Q6ZNA4 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
RNF111Q6ZNA4 AC131280.1-202ENST00000624067 4211 ntBASIC1.93□□□□□ -2.1
RNF111Q6ZNA4 RNY1P1-201ENST00000364372 112 ntBASIC1.93□□□□□ -2.1
RNF111Q6ZNA4 MIR1302-7-201ENST00000408841 72 ntBASIC1.93□□□□□ -2.1
RNF111Q6ZNA4 SPINT5P-201ENST00000448174 155 ntBASIC1.93□□□□□ -2.1
RNF111Q6ZNA4 HSPE1P24-201ENST00000450782 238 ntBASIC1.93□□□□□ -2.1
RNF111Q6ZNA4 MIR514B-201ENST00000516774 80 ntBASIC1.93□□□□□ -2.1
RNF111Q6ZNA4 MIR4299-201ENST00000577899 72 ntBASIC1.93□□□□□ -2.1
RNF111Q6ZNA4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
RNF111Q6ZNA4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RNF111Q6ZNA4 Y_RNA.98-201ENST00000363109 102 ntBASIC1.92□□□□□ -2.1
RNF111Q6ZNA4 SNORA67.3-201ENST00000384366 140 ntBASIC1.92□□□□□ -2.1
RNF111Q6ZNA4 RNU6-1152P-201ENST00000384576 107 ntBASIC1.92□□□□□ -2.1
RNF111Q6ZNA4 MIR588-201ENST00000384900 83 ntBASIC1.92□□□□□ -2.1
RNF111Q6ZNA4 MIR548G-201ENST00000408442 89 ntBASIC1.92□□□□□ -2.1
RNF111Q6ZNA4 RNU6-447P-201ENST00000410293 104 ntBASIC1.92□□□□□ -2.1
RNF111Q6ZNA4 RNU6-1118P-201ENST00000410382 104 ntBASIC1.92□□□□□ -2.1
RNF111Q6ZNA4 RNU6-1076P-201ENST00000410397 104 ntBASIC1.92□□□□□ -2.1
RNF111Q6ZNA4 RNU6-355P-201ENST00000410427 104 ntBASIC1.92□□□□□ -2.1
RNF111Q6ZNA4 RNU6-791P-201ENST00000410467 104 ntBASIC1.92□□□□□ -2.1
RNF111Q6ZNA4 RNU6-705P-201ENST00000410601 104 ntBASIC1.92□□□□□ -2.1
RNF111Q6ZNA4 RNU6-402P-201ENST00000410678 103 ntBASIC1.92□□□□□ -2.1
RNF111Q6ZNA4 RNU6-1100P-201ENST00000410691 104 ntBASIC1.92□□□□□ -2.1
RNF111Q6ZNA4 RNU6-860P-201ENST00000410860 104 ntBASIC1.92□□□□□ -2.1
RNF111Q6ZNA4 RNU6-1217P-201ENST00000411276 104 ntBASIC1.92□□□□□ -2.1
RNF111Q6ZNA4 RNU6-785P-201ENST00000411324 104 ntBASIC1.92□□□□□ -2.1
RNF111Q6ZNA4 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.92□□□□□ -2.1
RNF111Q6ZNA4 GHRLOS.1-201ENST00000610995 70 ntBASIC1.92□□□□□ -2.1
RNF111Q6ZNA4 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.92□□□□□ -2.1
RNF111Q6ZNA4 U6.90-201ENST00000614007 104 ntBASIC1.92□□□□□ -2.1
RNF111Q6ZNA4 U6.70-201ENST00000620287 104 ntBASIC1.92□□□□□ -2.1
RNF111Q6ZNA4 WWP1P1-201ENST00000466609 2769 ntBASIC1.92□□□□□ -2.1
RNF111Q6ZNA4 Y_RNA.73-201ENST00000362910 113 ntBASIC1.91□□□□□ -2.1
RNF111Q6ZNA4 SNORD58A-201ENST00000383875 65 ntBASIC1.91□□□□□ -2.1
RNF111Q6ZNA4 Y_RNA.567-201ENST00000384736 106 ntBASIC1.91□□□□□ -2.1
RNF111Q6ZNA4 HMGN2P19-201ENST00000425149 265 ntBASIC1.91□□□□□ -2.1
RNF111Q6ZNA4 snoU13.25-201ENST00000458945 104 ntBASIC1.91□□□□□ -2.1
RNF111Q6ZNA4 snoU13.2-201ENST00000459201 104 ntBASIC1.91□□□□□ -2.1
RNF111Q6ZNA4 AC022137.1-201ENST00000483735 151 ntBASIC1.91□□□□□ -2.1
RNF111Q6ZNA4 MIR5089-201ENST00000580047 84 ntBASIC1.91□□□□□ -2.1
RNF111Q6ZNA4 AC012493.3-201ENST00000604494 112 ntBASIC1.91□□□□□ -2.1
RNF111Q6ZNA4 RNU6-90P-201ENST00000606352 106 ntBASIC1.91□□□□□ -2.1
RNF111Q6ZNA4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.91□□□□□ -2.1
RNF111Q6ZNA4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.1
RNF111Q6ZNA4 SNORD116-10-201ENST00000363791 102 ntBASIC1.9□□□□□ -2.11
RNF111Q6ZNA4 SNORD116-22-201ENST00000384430 92 ntBASIC1.9□□□□□ -2.11
RNF111Q6ZNA4 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.9□□□□□ -2.11
RNF111Q6ZNA4 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.9□□□□□ -2.11
RNF111Q6ZNA4 RPL39P39-201ENST00000455840 151 ntBASIC1.9□□□□□ -2.11
RNF111Q6ZNA4 RNU1-98P-201ENST00000458992 160 ntBASIC1.9□□□□□ -2.11
RNF111Q6ZNA4 AC005908.1-201ENST00000468701 347 ntBASIC1.9□□□□□ -2.11
RNF111Q6ZNA4 RPS27P21-201ENST00000486977 252 ntBASIC1.9□□□□□ -2.11
RNF111Q6ZNA4 RNU6-250P-201ENST00000516958 103 ntBASIC1.9□□□□□ -2.11
RNF111Q6ZNA4 MTND5P40-201ENST00000559945 246 ntBASIC1.9□□□□□ -2.11
RNF111Q6ZNA4 AC133485.1-201ENST00000567176 124 ntBASIC1.9□□□□□ -2.11
RNF111Q6ZNA4 SNRPGP19-201ENST00000603826 189 ntBASIC1.9□□□□□ -2.11
RNF111Q6ZNA4 AP001362.1-201ENST00000625165 124 ntBASIC1.9□□□□□ -2.11
RNF111Q6ZNA4 RNU6-396P-201ENST00000365369 105 ntBASIC1.89□□□□□ -2.11
RNF111Q6ZNA4 SNORD38.2-201ENST00000384470 69 ntBASIC1.89□□□□□ -2.11
RNF111Q6ZNA4 RNU6-205P-201ENST00000390858 107 ntBASIC1.89□□□□□ -2.11
RNF111Q6ZNA4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.89□□□□□ -2.11
RNF111Q6ZNA4 RNU6-267P-201ENST00000516714 103 ntBASIC1.89□□□□□ -2.11
RNF111Q6ZNA4 AP003327.1-201ENST00000529684 127 ntBASIC1.89□□□□□ -2.11
RNF111Q6ZNA4 Y_RNA.783-201ENST00000613546 102 ntBASIC1.89□□□□□ -2.11
RNF111Q6ZNA4 RNA5SP432-201ENST00000362480 116 ntBASIC1.88□□□□□ -2.11
RNF111Q6ZNA4 RNU6-1244P-201ENST00000363614 108 ntBASIC1.88□□□□□ -2.11
RNF111Q6ZNA4 RNU6-497P-201ENST00000365316 104 ntBASIC1.88□□□□□ -2.11
RNF111Q6ZNA4 RNU6-949P-201ENST00000384040 107 ntBASIC1.88□□□□□ -2.11
RNF111Q6ZNA4 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
RNF111Q6ZNA4 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.88□□□□□ -2.11
RNF111Q6ZNA4 AC019176.1-201ENST00000518519 225 ntBASIC1.88□□□□□ -2.11
RNF111Q6ZNA4 MIR6740-201ENST00000618268 113 ntBASIC1.88□□□□□ -2.11
RNF111Q6ZNA4 AC012676.2-201ENST00000619258 186 ntBASIC1.88□□□□□ -2.11
RNF111Q6ZNA4 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.88□□□□□ -2.11
RNF111Q6ZNA4 RNY1P4-201ENST00000384595 115 ntBASIC1.87□□□□□ -2.11
RNF111Q6ZNA4 MIR4668-201ENST00000582284 70 ntBASIC1.87□□□□□ -2.11
RNF111Q6ZNA4 AC103810.8-201ENST00000607347 118 ntBASIC1.87□□□□□ -2.11
RNF111Q6ZNA4 AL161722.3-201ENST00000605789 2983 ntBASIC1.86□□□□□ -2.11
RNF111Q6ZNA4 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 236.7 ms