Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 MIR938-201ENST00000401216 83 ntBASIC0.57□□□□□ -2.32
RFWD3Q6PCD5 MIR1257-201ENST00000408490 117 ntBASIC0.57□□□□□ -2.32
RFWD3Q6PCD5 RNA5SP237-201ENST00000410414 113 ntBASIC0.57□□□□□ -2.32
RFWD3Q6PCD5 AL157398.1-201ENST00000452981 186 ntBASIC0.57□□□□□ -2.32
RFWD3Q6PCD5 RNU7-56P-201ENST00000458744 62 ntBASIC0.57□□□□□ -2.32
RFWD3Q6PCD5 MIR6779-201ENST00000617283 64 ntBASIC0.57□□□□□ -2.32
RFWD3Q6PCD5 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
RFWD3Q6PCD5 RNA5SP347-201ENST00000362445 119 ntBASIC0.56□□□□□ -2.32
RFWD3Q6PCD5 RNU6-1318P-201ENST00000365389 103 ntBASIC0.56□□□□□ -2.32
RFWD3Q6PCD5 MIR573-201ENST00000384964 99 ntBASIC0.56□□□□□ -2.32
RFWD3Q6PCD5 MIR125B2-201ENST00000385128 89 ntBASIC0.56□□□□□ -2.32
RFWD3Q6PCD5 COX6CP6-201ENST00000490840 228 ntBASIC0.56□□□□□ -2.32
RFWD3Q6PCD5 Y_RNA.662-201ENST00000516028 97 ntBASIC0.56□□□□□ -2.32
RFWD3Q6PCD5 RNA5SP236-201ENST00000516169 116 ntBASIC0.56□□□□□ -2.32
RFWD3Q6PCD5 RNU6-229P-201ENST00000516614 102 ntBASIC0.56□□□□□ -2.32
RFWD3Q6PCD5 RNU6-861P-201ENST00000516745 106 ntBASIC0.56□□□□□ -2.32
RFWD3Q6PCD5 SNORA81.3-201ENST00000517283 198 ntBASIC0.56□□□□□ -2.32
RFWD3Q6PCD5 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.56□□□□□ -2.32
RFWD3Q6PCD5 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.56□□□□□ -2.32
RFWD3Q6PCD5 AL662814.1-201ENST00000617364 121 ntBASIC0.56□□□□□ -2.32
RFWD3Q6PCD5 RNU6-349P-201ENST00000362402 107 ntBASIC0.55□□□□□ -2.32
RFWD3Q6PCD5 RNU6-682P-201ENST00000363843 106 ntBASIC0.55□□□□□ -2.32
RFWD3Q6PCD5 RNU4-16P-201ENST00000364737 141 ntBASIC0.55□□□□□ -2.32
RFWD3Q6PCD5 Y_RNA.441-201ENST00000384123 112 ntBASIC0.55□□□□□ -2.32
RFWD3Q6PCD5 RNU6-1237P-201ENST00000384777 107 ntBASIC0.55□□□□□ -2.32
RFWD3Q6PCD5 RNU5E-9P-201ENST00000411164 104 ntBASIC0.55□□□□□ -2.32
RFWD3Q6PCD5 MTATP6P21-201ENST00000440681 189 ntBASIC0.55□□□□□ -2.32
RFWD3Q6PCD5 RN7SL793P-201ENST00000583259 296 ntBASIC0.55□□□□□ -2.32
RFWD3Q6PCD5 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
RFWD3Q6PCD5 RNY1P8-201ENST00000383970 114 ntBASIC0.54□□□□□ -2.32
RFWD3Q6PCD5 RNU6-364P-201ENST00000384387 107 ntBASIC0.54□□□□□ -2.32
RFWD3Q6PCD5 Y_RNA.497-201ENST00000384447 98 ntBASIC0.54□□□□□ -2.32
RFWD3Q6PCD5 RNY1P4-201ENST00000384595 115 ntBASIC0.54□□□□□ -2.32
RFWD3Q6PCD5 MIR936-201ENST00000401264 98 ntBASIC0.54□□□□□ -2.32
RFWD3Q6PCD5 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.54□□□□□ -2.32
RFWD3Q6PCD5 RNU6-588P-201ENST00000410281 105 ntBASIC0.54□□□□□ -2.32
RFWD3Q6PCD5 RNU6-447P-201ENST00000410293 104 ntBASIC0.54□□□□□ -2.32
RFWD3Q6PCD5 RNU6-1118P-201ENST00000410382 104 ntBASIC0.54□□□□□ -2.32
RFWD3Q6PCD5 RNU6-1076P-201ENST00000410397 104 ntBASIC0.54□□□□□ -2.32
RFWD3Q6PCD5 RNU6-355P-201ENST00000410427 104 ntBASIC0.54□□□□□ -2.32
RFWD3Q6PCD5 RNU6-791P-201ENST00000410467 104 ntBASIC0.54□□□□□ -2.32
RFWD3Q6PCD5 RNU6-705P-201ENST00000410601 104 ntBASIC0.54□□□□□ -2.32
RFWD3Q6PCD5 RNU6-1100P-201ENST00000410691 104 ntBASIC0.54□□□□□ -2.32
RFWD3Q6PCD5 RNU6-860P-201ENST00000410860 104 ntBASIC0.54□□□□□ -2.32
RFWD3Q6PCD5 RNU6-1135P-201ENST00000411083 103 ntBASIC0.54□□□□□ -2.32
RFWD3Q6PCD5 RNU6-1217P-201ENST00000411276 104 ntBASIC0.54□□□□□ -2.32
RFWD3Q6PCD5 RNU6-785P-201ENST00000411324 104 ntBASIC0.54□□□□□ -2.32
RFWD3Q6PCD5 AC092628.1-201ENST00000436250 252 ntBASIC0.54□□□□□ -2.32
RFWD3Q6PCD5 RNA5SP121-201ENST00000516537 101 ntBASIC0.54□□□□□ -2.32
RFWD3Q6PCD5 RNU7-156P-201ENST00000517214 74 ntBASIC0.54□□□□□ -2.32
RFWD3Q6PCD5 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.54□□□□□ -2.32
RFWD3Q6PCD5 AC141846.1-201ENST00000568348 142 ntBASIC0.54□□□□□ -2.32
RFWD3Q6PCD5 Y_RNA.757-201ENST00000578934 114 ntBASIC0.54□□□□□ -2.32
RFWD3Q6PCD5 DNAJC19P2-201ENST00000593340 302 ntBASIC0.54□□□□□ -2.32
RFWD3Q6PCD5 U6.90-201ENST00000614007 104 ntBASIC0.54□□□□□ -2.32
RFWD3Q6PCD5 AC004792.1-201ENST00000614523 137 ntBASIC0.54□□□□□ -2.32
RFWD3Q6PCD5 U6.70-201ENST00000620287 104 ntBASIC0.54□□□□□ -2.32
RFWD3Q6PCD5 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
RFWD3Q6PCD5 RNA5SP144-201ENST00000410846 116 ntBASIC0.53□□□□□ -2.32
RFWD3Q6PCD5 RNA5SP222-201ENST00000411039 105 ntBASIC0.53□□□□□ -2.32
RFWD3Q6PCD5 RPL39P25-201ENST00000449384 154 ntBASIC0.53□□□□□ -2.32
RFWD3Q6PCD5 RNU7-102P-201ENST00000458948 62 ntBASIC0.53□□□□□ -2.32
RFWD3Q6PCD5 SNORD92-201ENST00000585078 85 ntBASIC0.53□□□□□ -2.32
RFWD3Q6PCD5 AC011603.4-201ENST00000611325 277 ntBASIC0.53□□□□□ -2.32
RFWD3Q6PCD5 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.33
RFWD3Q6PCD5 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.33
RFWD3Q6PCD5 Y_RNA.205-201ENST00000364128 113 ntBASIC0.52□□□□□ -2.33
RFWD3Q6PCD5 SNORA18-201ENST00000384416 132 ntBASIC0.52□□□□□ -2.33
RFWD3Q6PCD5 SNORD37.2-201ENST00000391075 66 ntBASIC0.52□□□□□ -2.33
RFWD3Q6PCD5 SNORD93-201ENST00000408813 74 ntBASIC0.52□□□□□ -2.33
RFWD3Q6PCD5 RNA5SP193-201ENST00000410353 107 ntBASIC0.52□□□□□ -2.33
RFWD3Q6PCD5 RNU4-54P-201ENST00000516428 129 ntBASIC0.52□□□□□ -2.33
RFWD3Q6PCD5 RNU6-1258P-201ENST00000516911 111 ntBASIC0.52□□□□□ -2.33
RFWD3Q6PCD5 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.52□□□□□ -2.33
RFWD3Q6PCD5 MIR3658-201ENST00000636291 56 ntBASIC0.52□□□□□ -2.33
RFWD3Q6PCD5 RNU6-690P-201ENST00000365242 106 ntBASIC0.51□□□□□ -2.33
RFWD3Q6PCD5 RNU4-45P-201ENST00000365469 141 ntBASIC0.51□□□□□ -2.33
RFWD3Q6PCD5 AL022718.1-201ENST00000412004 84 ntBASIC0.51□□□□□ -2.33
RFWD3Q6PCD5 AC090897.1-201ENST00000580909 226 ntBASIC0.51□□□□□ -2.33
RFWD3Q6PCD5 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.51□□□□□ -2.33
RFWD3Q6PCD5 Y_RNA.171-201ENST00000363760 102 ntBASIC0.5□□□□□ -2.33
RFWD3Q6PCD5 Y_RNA.272-201ENST00000364696 102 ntBASIC0.5□□□□□ -2.33
RFWD3Q6PCD5 SNORD18B-201ENST00000365659 72 ntBASIC0.5□□□□□ -2.33
RFWD3Q6PCD5 RNU6-949P-201ENST00000384040 107 ntBASIC0.5□□□□□ -2.33
RFWD3Q6PCD5 U8.15-201ENST00000390947 134 ntBASIC0.5□□□□□ -2.33
RFWD3Q6PCD5 Y_RNA.584-201ENST00000391090 114 ntBASIC0.5□□□□□ -2.33
RFWD3Q6PCD5 SNORD100-201ENST00000408573 76 ntBASIC0.5□□□□□ -2.33
RFWD3Q6PCD5 RNU6-1086P-201ENST00000410930 100 ntBASIC0.5□□□□□ -2.33
RFWD3Q6PCD5 RNU7-113P-201ENST00000459273 62 ntBASIC0.5□□□□□ -2.33
RFWD3Q6PCD5 RNU2-60P-201ENST00000517290 128 ntBASIC0.5□□□□□ -2.33
RFWD3Q6PCD5 MIR4711-201ENST00000578274 70 ntBASIC0.5□□□□□ -2.33
RFWD3Q6PCD5 MIR3612-201ENST00000579753 87 ntBASIC0.5□□□□□ -2.33
RFWD3Q6PCD5 AC008608.1-201ENST00000603910 127 ntBASIC0.5□□□□□ -2.33
RFWD3Q6PCD5 AC243829.3-201ENST00000622177 108 ntBASIC0.5□□□□□ -2.33
RFWD3Q6PCD5 MIR18A-201ENST00000362310 71 ntBASIC0.49□□□□□ -2.33
RFWD3Q6PCD5 SNORD115-2-201ENST00000362842 82 ntBASIC0.49□□□□□ -2.33
RFWD3Q6PCD5 SNORD115-20-201ENST00000365099 82 ntBASIC0.49□□□□□ -2.33
RFWD3Q6PCD5 SNORA36.2-201ENST00000384004 127 ntBASIC0.49□□□□□ -2.33
RFWD3Q6PCD5 RNU4-83P-201ENST00000410863 133 ntBASIC0.49□□□□□ -2.33
RFWD3Q6PCD5 RNU6-182P-201ENST00000516970 105 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 185.7 ms