Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.74□□□□□ -2.13
E4F1Q66K89 AL662814.1-201ENST00000617364 121 ntBASIC1.74□□□□□ -2.13
E4F1Q66K89 MIR6516-201ENST00000630554 81 ntBASIC1.74□□□□□ -2.13
E4F1Q66K89 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.74□□□□□ -2.13
E4F1Q66K89 RNY3P2-201ENST00000362918 102 ntBASIC1.73□□□□□ -2.13
E4F1Q66K89 Y_RNA.78-201ENST00000362970 110 ntBASIC1.73□□□□□ -2.13
E4F1Q66K89 RNU6-654P-201ENST00000364373 107 ntBASIC1.73□□□□□ -2.13
E4F1Q66K89 RNY1P13-201ENST00000365030 105 ntBASIC1.73□□□□□ -2.13
E4F1Q66K89 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.73□□□□□ -2.13
E4F1Q66K89 AL353813.1-201ENST00000440700 253 ntBASIC1.73□□□□□ -2.13
E4F1Q66K89 RNU7-62P-201ENST00000458856 62 ntBASIC1.73□□□□□ -2.13
E4F1Q66K89 RNU6-904P-201ENST00000516206 101 ntBASIC1.73□□□□□ -2.13
E4F1Q66K89 RNA5SP170-201ENST00000517150 101 ntBASIC1.73□□□□□ -2.13
E4F1Q66K89 MIR4694-201ENST00000578534 80 ntBASIC1.73□□□□□ -2.13
E4F1Q66K89 MIR4255-201ENST00000579351 72 ntBASIC1.73□□□□□ -2.13
E4F1Q66K89 AP001318.4-201ENST00000616637 121 ntBASIC1.73□□□□□ -2.13
E4F1Q66K89 MIR6740-201ENST00000618268 113 ntBASIC1.73□□□□□ -2.13
E4F1Q66K89 RNU6-1099P-201ENST00000363533 107 ntBASIC1.72□□□□□ -2.13
E4F1Q66K89 Y_RNA.448-201ENST00000384185 108 ntBASIC1.72□□□□□ -2.13
E4F1Q66K89 RNU7-137P-201ENST00000516788 62 ntBASIC1.72□□□□□ -2.13
E4F1Q66K89 AP003716.2-201ENST00000528260 108 ntBASIC1.72□□□□□ -2.13
E4F1Q66K89 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.72□□□□□ -2.13
E4F1Q66K89 MIR3945-201ENST00000581853 98 ntBASIC1.72□□□□□ -2.13
E4F1Q66K89 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
E4F1Q66K89 RNU6-1298P-201ENST00000362456 101 ntBASIC1.71□□□□□ -2.14
E4F1Q66K89 RNU6-832P-201ENST00000363319 107 ntBASIC1.71□□□□□ -2.14
E4F1Q66K89 RNU6-1307P-201ENST00000391012 103 ntBASIC1.71□□□□□ -2.14
E4F1Q66K89 RNY4P30-201ENST00000410216 95 ntBASIC1.71□□□□□ -2.14
E4F1Q66K89 AC048334.1-201ENST00000477975 159 ntBASIC1.71□□□□□ -2.14
E4F1Q66K89 RNU11-2P-201ENST00000516898 142 ntBASIC1.71□□□□□ -2.14
E4F1Q66K89 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
E4F1Q66K89 SNORD114-10-201ENST00000363409 72 ntBASIC1.7□□□□□ -2.14
E4F1Q66K89 RNU6-865P-201ENST00000364772 107 ntBASIC1.7□□□□□ -2.14
E4F1Q66K89 Y_RNA.330-201ENST00000365230 109 ntBASIC1.7□□□□□ -2.14
E4F1Q66K89 Y_RNA.348-201ENST00000365403 103 ntBASIC1.7□□□□□ -2.14
E4F1Q66K89 MIR504-201ENST00000385065 83 ntBASIC1.7□□□□□ -2.14
E4F1Q66K89 MT-TN-201ENST00000387400 73 ntBASIC1.7□□□□□ -2.14
E4F1Q66K89 RNU6-1321P-201ENST00000390905 107 ntBASIC1.7□□□□□ -2.14
E4F1Q66K89 MIR1323-201ENST00000408090 73 ntBASIC1.7□□□□□ -2.14
E4F1Q66K89 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.7□□□□□ -2.14
E4F1Q66K89 AC245517.4-201ENST00000448601 281 ntBASIC1.7□□□□□ -2.14
E4F1Q66K89 SNORA40.13-201ENST00000516379 120 ntBASIC1.7□□□□□ -2.14
E4F1Q66K89 RNU6-1018P-201ENST00000516577 106 ntBASIC1.7□□□□□ -2.14
E4F1Q66K89 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.7□□□□□ -2.14
E4F1Q66K89 Y_RNA.818-201ENST00000618813 71 ntBASIC1.7□□□□□ -2.14
E4F1Q66K89 Y_RNA.10-201ENST00000362371 110 ntBASIC1.69□□□□□ -2.14
E4F1Q66K89 RNU6-1201P-201ENST00000384227 107 ntBASIC1.69□□□□□ -2.14
E4F1Q66K89 MIR934-201ENST00000401241 83 ntBASIC1.69□□□□□ -2.14
E4F1Q66K89 RNU6-1165P-201ENST00000410119 107 ntBASIC1.69□□□□□ -2.14
E4F1Q66K89 AC108729.3-201ENST00000513484 108 ntBASIC1.69□□□□□ -2.14
E4F1Q66K89 SNORA31.2-201ENST00000516019 134 ntBASIC1.69□□□□□ -2.14
E4F1Q66K89 SCARNA23-201ENST00000516060 130 ntBASIC1.69□□□□□ -2.14
E4F1Q66K89 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.69□□□□□ -2.14
E4F1Q66K89 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.68□□□□□ -2.14
E4F1Q66K89 RNU6-1313P-201ENST00000362622 102 ntBASIC1.68□□□□□ -2.14
E4F1Q66K89 RNU6-905P-201ENST00000384434 107 ntBASIC1.68□□□□□ -2.14
E4F1Q66K89 RNU6-613P-201ENST00000410412 108 ntBASIC1.68□□□□□ -2.14
E4F1Q66K89 Y_RNA.601-201ENST00000410500 113 ntBASIC1.68□□□□□ -2.14
E4F1Q66K89 Y_RNA.659-201ENST00000515994 113 ntBASIC1.68□□□□□ -2.14
E4F1Q66K89 RNU6-970P-201ENST00000516312 107 ntBASIC1.68□□□□□ -2.14
E4F1Q66K89 RNU6-902P-201ENST00000517212 91 ntBASIC1.68□□□□□ -2.14
E4F1Q66K89 AC133485.1-201ENST00000567176 124 ntBASIC1.68□□□□□ -2.14
E4F1Q66K89 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.68□□□□□ -2.14
E4F1Q66K89 AL442128.1-201ENST00000615151 90 ntBASIC1.68□□□□□ -2.14
E4F1Q66K89 Y_RNA.107-201ENST00000363190 121 ntBASIC1.67□□□□□ -2.14
E4F1Q66K89 RNU6-949P-201ENST00000384040 107 ntBASIC1.67□□□□□ -2.14
E4F1Q66K89 SNORA2B-201ENST00000384583 137 ntBASIC1.67□□□□□ -2.14
E4F1Q66K89 RNU6-997P-201ENST00000384725 107 ntBASIC1.67□□□□□ -2.14
E4F1Q66K89 RPS29P28-201ENST00000446439 141 ntBASIC1.67□□□□□ -2.14
E4F1Q66K89 RNU6-795P-201ENST00000516323 103 ntBASIC1.67□□□□□ -2.14
E4F1Q66K89 Y_RNA.694-201ENST00000516677 117 ntBASIC1.67□□□□□ -2.14
E4F1Q66K89 SNORA4-201ENST00000584302 138 ntBASIC1.67□□□□□ -2.14
E4F1Q66K89 AC096720.1-201ENST00000604441 183 ntBASIC1.67□□□□□ -2.14
E4F1Q66K89 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.67□□□□□ -2.14
E4F1Q66K89 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.67□□□□□ -2.14
E4F1Q66K89 RNU6-640P-201ENST00000363693 105 ntBASIC1.66□□□□□ -2.14
E4F1Q66K89 MIR34C-201ENST00000384831 77 ntBASIC1.66□□□□□ -2.14
E4F1Q66K89 MIR563-201ENST00000385080 79 ntBASIC1.66□□□□□ -2.14
E4F1Q66K89 MIR1261-201ENST00000408659 82 ntBASIC1.66□□□□□ -2.14
E4F1Q66K89 RNU7-48P-201ENST00000458875 63 ntBASIC1.66□□□□□ -2.14
E4F1Q66K89 UBL5P1-201ENST00000507979 193 ntBASIC1.66□□□□□ -2.14
E4F1Q66K89 RNA5SP61-201ENST00000516453 100 ntBASIC1.66□□□□□ -2.14
E4F1Q66K89 uc_338.6-201ENST00000613544 171 ntBASIC1.66□□□□□ -2.14
E4F1Q66K89 RNU6-447P-201ENST00000410293 104 ntBASIC1.65□□□□□ -2.15
E4F1Q66K89 RNU6-1118P-201ENST00000410382 104 ntBASIC1.65□□□□□ -2.15
E4F1Q66K89 RNU6-1076P-201ENST00000410397 104 ntBASIC1.65□□□□□ -2.15
E4F1Q66K89 RNU6-355P-201ENST00000410427 104 ntBASIC1.65□□□□□ -2.15
E4F1Q66K89 RNU6-791P-201ENST00000410467 104 ntBASIC1.65□□□□□ -2.15
E4F1Q66K89 RNU6-705P-201ENST00000410601 104 ntBASIC1.65□□□□□ -2.15
E4F1Q66K89 RNU6-1100P-201ENST00000410691 104 ntBASIC1.65□□□□□ -2.15
E4F1Q66K89 RNU6-860P-201ENST00000410860 104 ntBASIC1.65□□□□□ -2.15
E4F1Q66K89 RNU6-1217P-201ENST00000411276 104 ntBASIC1.65□□□□□ -2.15
E4F1Q66K89 RNU6-1054P-201ENST00000411293 104 ntBASIC1.65□□□□□ -2.15
E4F1Q66K89 RNU6-785P-201ENST00000411324 104 ntBASIC1.65□□□□□ -2.15
E4F1Q66K89 RNU6-295P-201ENST00000516901 104 ntBASIC1.65□□□□□ -2.15
E4F1Q66K89 U6.90-201ENST00000614007 104 ntBASIC1.65□□□□□ -2.15
E4F1Q66K89 MIR376B-201ENST00000614515 100 ntBASIC1.65□□□□□ -2.15
E4F1Q66K89 SEPT14P17-201ENST00000617978 177 ntBASIC1.65□□□□□ -2.15
E4F1Q66K89 U6.70-201ENST00000620287 104 ntBASIC1.65□□□□□ -2.15
E4F1Q66K89 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 337.6 ms