Protein–RNA interactions for Protein: Q4ZIN3

TMEM259, Membralin, humanhuman

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259Q4ZIN3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.56□□□□□ -2
TMEM259Q4ZIN3 Y_RNA.609-201ENST00000410669 89 ntBASIC2.56□□□□□ -2
TMEM259Q4ZIN3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.56□□□□□ -2
TMEM259Q4ZIN3 AC005908.1-201ENST00000468701 347 ntBASIC2.56□□□□□ -2
TMEM259Q4ZIN3 RNA5SP320-201ENST00000516263 124 ntBASIC2.56□□□□□ -2
TMEM259Q4ZIN3 SNORA44.1-201ENST00000517031 108 ntBASIC2.56□□□□□ -2
TMEM259Q4ZIN3 MIR4435-1-201ENST00000582552 80 ntBASIC2.56□□□□□ -2
TMEM259Q4ZIN3 MIR548BB-201ENST00000626714 66 ntBASIC2.56□□□□□ -2
TMEM259Q4ZIN3 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.55□□□□□ -2
TMEM259Q4ZIN3 RNU6-949P-201ENST00000384040 107 ntBASIC2.55□□□□□ -2
TMEM259Q4ZIN3 RNU6-205P-201ENST00000390858 107 ntBASIC2.55□□□□□ -2
TMEM259Q4ZIN3 RN7SL274P-201ENST00000492268 272 ntBASIC2.55□□□□□ -2
TMEM259Q4ZIN3 MIR2115-201ENST00000516657 100 ntBASIC2.55□□□□□ -2
TMEM259Q4ZIN3 RNA5SP82-201ENST00000516707 92 ntBASIC2.55□□□□□ -2
TMEM259Q4ZIN3 AC019176.1-201ENST00000518519 225 ntBASIC2.55□□□□□ -2
TMEM259Q4ZIN3 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.55□□□□□ -2
TMEM259Q4ZIN3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.55□□□□□ -2
TMEM259Q4ZIN3 SNRPGP19-201ENST00000603826 189 ntBASIC2.55□□□□□ -2
TMEM259Q4ZIN3 AC103810.8-201ENST00000607347 118 ntBASIC2.55□□□□□ -2
TMEM259Q4ZIN3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TMEM259Q4ZIN3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TMEM259Q4ZIN3 SNORD116-10-201ENST00000363791 102 ntBASIC2.54□□□□□ -2
TMEM259Q4ZIN3 MIR30A-201ENST00000385092 71 ntBASIC2.54□□□□□ -2
TMEM259Q4ZIN3 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.54□□□□□ -2
TMEM259Q4ZIN3 AC079140.2-201ENST00000506193 142 ntBASIC2.54□□□□□ -2
TMEM259Q4ZIN3 MIR4264-201ENST00000583520 66 ntBASIC2.54□□□□□ -2
TMEM259Q4ZIN3 AC012676.2-201ENST00000619258 186 ntBASIC2.54□□□□□ -2
TMEM259Q4ZIN3 U4.3-201ENST00000621047 82 ntBASIC2.54□□□□□ -2
TMEM259Q4ZIN3 SNORD1A-201ENST00000364968 72 ntBASIC2.53□□□□□ -2
TMEM259Q4ZIN3 HMGN2P23-201ENST00000456759 269 ntBASIC2.53□□□□□ -2
TMEM259Q4ZIN3 RNU1-98P-201ENST00000458992 160 ntBASIC2.53□□□□□ -2
TMEM259Q4ZIN3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.53□□□□□ -2
TMEM259Q4ZIN3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
TMEM259Q4ZIN3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
TMEM259Q4ZIN3 snoU13.25-201ENST00000458945 104 ntBASIC2.52□□□□□ -2.01
TMEM259Q4ZIN3 MIR3937-201ENST00000580135 106 ntBASIC2.52□□□□□ -2.01
TMEM259Q4ZIN3 MIR3945-201ENST00000581853 98 ntBASIC2.52□□□□□ -2.01
TMEM259Q4ZIN3 MIR6740-201ENST00000618268 113 ntBASIC2.52□□□□□ -2.01
TMEM259Q4ZIN3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
TMEM259Q4ZIN3 MIR103A2-201ENST00000362154 78 ntBASIC2.51□□□□□ -2.01
TMEM259Q4ZIN3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.51□□□□□ -2.01
TMEM259Q4ZIN3 RNA5SP210-201ENST00000391034 120 ntBASIC2.51□□□□□ -2.01
TMEM259Q4ZIN3 RNU7-62P-201ENST00000458856 62 ntBASIC2.51□□□□□ -2.01
TMEM259Q4ZIN3 RPS29P11-201ENST00000496507 171 ntBASIC2.51□□□□□ -2.01
TMEM259Q4ZIN3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
TMEM259Q4ZIN3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
TMEM259Q4ZIN3 AL596028.1-201ENST00000326971 197 ntBASIC2.5□□□□□ -2.01
TMEM259Q4ZIN3 SNORD33-201ENST00000362761 85 ntBASIC2.5□□□□□ -2.01
TMEM259Q4ZIN3 RNU6-509P-201ENST00000363519 107 ntBASIC2.5□□□□□ -2.01
TMEM259Q4ZIN3 RNU6-1065P-201ENST00000384513 106 ntBASIC2.5□□□□□ -2.01
TMEM259Q4ZIN3 SNORA4-201ENST00000584302 138 ntBASIC2.5□□□□□ -2.01
TMEM259Q4ZIN3 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.5□□□□□ -2.01
TMEM259Q4ZIN3 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.5□□□□□ -2.01
TMEM259Q4ZIN3 MIR6516-201ENST00000630554 81 ntBASIC2.5□□□□□ -2.01
TMEM259Q4ZIN3 RNA5SP264-201ENST00000363115 107 ntBASIC2.49□□□□□ -2.01
TMEM259Q4ZIN3 Y_RNA.426-201ENST00000384068 113 ntBASIC2.49□□□□□ -2.01
TMEM259Q4ZIN3 RNU6-1165P-201ENST00000410119 107 ntBASIC2.49□□□□□ -2.01
TMEM259Q4ZIN3 RNA5SP508-201ENST00000411327 119 ntBASIC2.49□□□□□ -2.01
TMEM259Q4ZIN3 MIR5092-201ENST00000583139 88 ntBASIC2.49□□□□□ -2.01
TMEM259Q4ZIN3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.49□□□□□ -2.01
TMEM259Q4ZIN3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
TMEM259Q4ZIN3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
TMEM259Q4ZIN3 RNU6-1244P-201ENST00000363614 108 ntBASIC2.48□□□□□ -2.01
TMEM259Q4ZIN3 RNY1P2-201ENST00000364820 117 ntBASIC2.48□□□□□ -2.01
TMEM259Q4ZIN3 MT-TN-201ENST00000387400 73 ntBASIC2.48□□□□□ -2.01
TMEM259Q4ZIN3 AL359511.1-201ENST00000402970 211 ntBASIC2.48□□□□□ -2.01
TMEM259Q4ZIN3 RNU6-613P-201ENST00000410412 108 ntBASIC2.48□□□□□ -2.01
TMEM259Q4ZIN3 HMGN2P19-201ENST00000425149 265 ntBASIC2.48□□□□□ -2.01
TMEM259Q4ZIN3 RNU11-2P-201ENST00000516898 142 ntBASIC2.48□□□□□ -2.01
TMEM259Q4ZIN3 AL627230.6-201ENST00000611129 280 ntBASIC2.48□□□□□ -2.01
TMEM259Q4ZIN3 MIR6895-201ENST00000613497 78 ntBASIC2.48□□□□□ -2.01
TMEM259Q4ZIN3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.47□□□□□ -2.01
TMEM259Q4ZIN3 ZNF658B-202ENST00000615961 3375 ntBASIC2.47□□□□□ -2.01
TMEM259Q4ZIN3 MIR302D-201ENST00000362275 68 ntBASIC2.47□□□□□ -2.01
TMEM259Q4ZIN3 RNA5SP289-201ENST00000362332 137 ntBASIC2.47□□□□□ -2.01
TMEM259Q4ZIN3 RNA5SP456-201ENST00000364002 114 ntBASIC2.47□□□□□ -2.01
TMEM259Q4ZIN3 RNU6-524P-201ENST00000384270 107 ntBASIC2.47□□□□□ -2.01
TMEM259Q4ZIN3 MIR563-201ENST00000385080 79 ntBASIC2.47□□□□□ -2.01
TMEM259Q4ZIN3 MIR1185-1-201ENST00000408598 86 ntBASIC2.47□□□□□ -2.01
TMEM259Q4ZIN3 RPL23AP42-201ENST00000471152 471 ntBASIC2.47□□□□□ -2.01
TMEM259Q4ZIN3 RPS27P21-201ENST00000486977 252 ntBASIC2.47□□□□□ -2.01
TMEM259Q4ZIN3 MIR4500-201ENST00000579472 76 ntBASIC2.47□□□□□ -2.01
TMEM259Q4ZIN3 MIR6715A-201ENST00000615929 79 ntBASIC2.47□□□□□ -2.01
TMEM259Q4ZIN3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.46□□□□□ -2.01
TMEM259Q4ZIN3 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
TMEM259Q4ZIN3 Y_RNA.173-201ENST00000363776 113 ntBASIC2.46□□□□□ -2.02
TMEM259Q4ZIN3 RNU6-480P-201ENST00000384332 107 ntBASIC2.46□□□□□ -2.02
TMEM259Q4ZIN3 SNORA67.3-201ENST00000384366 140 ntBASIC2.46□□□□□ -2.02
TMEM259Q4ZIN3 RNU6-24P-201ENST00000384440 107 ntBASIC2.46□□□□□ -2.02
TMEM259Q4ZIN3 RPL30P7-201ENST00000479312 323 ntBASIC2.46□□□□□ -2.02
TMEM259Q4ZIN3 AC008413.1-201ENST00000511864 177 ntBASIC2.46□□□□□ -2.02
TMEM259Q4ZIN3 SNORD53-201ENST00000579969 78 ntBASIC2.46□□□□□ -2.02
TMEM259Q4ZIN3 U6.109-201ENST00000636749 87 ntBASIC2.46□□□□□ -2.02
TMEM259Q4ZIN3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.45□□□□□ -2.02
TMEM259Q4ZIN3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
TMEM259Q4ZIN3 MIR30D-201ENST00000362283 70 ntBASIC2.45□□□□□ -2.02
TMEM259Q4ZIN3 RNU6-633P-201ENST00000362612 103 ntBASIC2.45□□□□□ -2.02
TMEM259Q4ZIN3 Y_RNA.94-201ENST00000363068 106 ntBASIC2.45□□□□□ -2.02
TMEM259Q4ZIN3 Y_RNA.168-201ENST00000363740 102 ntBASIC2.45□□□□□ -2.02
TMEM259Q4ZIN3 Y_RNA.316-201ENST00000365118 111 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 200.9 ms