Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 Y_RNA.521-201ENST00000384560 114 ntBASIC0.33□□□□□ -2.36
GABPAQ06546 MIR624-201ENST00000385217 97 ntBASIC0.33□□□□□ -2.36
GABPAQ06546 Y_RNA.617-201ENST00000410920 90 ntBASIC0.33□□□□□ -2.36
GABPAQ06546 SNORA40.8-201ENST00000411034 126 ntBASIC0.33□□□□□ -2.36
GABPAQ06546 RNU6-893P-201ENST00000458841 100 ntBASIC0.33□□□□□ -2.36
GABPAQ06546 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
GABPAQ06546 AC062037.2-201ENST00000610137 73 ntBASIC0.33□□□□□ -2.36
GABPAQ06546 MIR8066-201ENST00000617280 78 ntBASIC0.33□□□□□ -2.36
GABPAQ06546 uc_338.16-201ENST00000621804 95 ntBASIC0.33□□□□□ -2.36
GABPAQ06546 MIR6841-201ENST00000637129 72 ntBASIC0.33□□□□□ -2.36
GABPAQ06546 MIR924-201ENST00000638017 53 ntBASIC0.33□□□□□ -2.36
GABPAQ06546 Y_RNA.478-201ENST00000384358 107 ntBASIC0.32□□□□□ -2.36
GABPAQ06546 Y_RNA.515-201ENST00000384535 112 ntBASIC0.32□□□□□ -2.36
GABPAQ06546 Y_RNA.567-201ENST00000384736 106 ntBASIC0.32□□□□□ -2.36
GABPAQ06546 SNORD71-201ENST00000411292 86 ntBASIC0.32□□□□□ -2.36
GABPAQ06546 AL118496.2-201ENST00000448300 230 ntBASIC0.32□□□□□ -2.36
GABPAQ06546 Y_RNA.668-201ENST00000516233 93 ntBASIC0.32□□□□□ -2.36
GABPAQ06546 MIR4491-201ENST00000581087 68 ntBASIC0.32□□□□□ -2.36
GABPAQ06546 MTND5P32-201ENST00000560711 1802 ntBASIC0.31□□□□□ -2.36
GABPAQ06546 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.31□□□□□ -2.36
GABPAQ06546 Y_RNA.42-201ENST00000362660 108 ntBASIC0.31□□□□□ -2.36
GABPAQ06546 RNU6-275P-201ENST00000364910 107 ntBASIC0.31□□□□□ -2.36
GABPAQ06546 SNORA72.6-201ENST00000384520 129 ntBASIC0.31□□□□□ -2.36
GABPAQ06546 MIR518A1-201ENST00000385068 85 ntBASIC0.31□□□□□ -2.36
GABPAQ06546 MIR644A-201ENST00000385262 94 ntBASIC0.31□□□□□ -2.36
GABPAQ06546 RNU6-469P-201ENST00000516253 101 ntBASIC0.31□□□□□ -2.36
GABPAQ06546 RNU6-1045P-201ENST00000516321 107 ntBASIC0.31□□□□□ -2.36
GABPAQ06546 AC133485.4-201ENST00000561835 220 ntBASIC0.31□□□□□ -2.36
GABPAQ06546 SNORA25.18-201ENST00000607153 114 ntBASIC0.31□□□□□ -2.36
GABPAQ06546 MIR6082-201ENST00000613604 109 ntBASIC0.31□□□□□ -2.36
GABPAQ06546 U6.106-201ENST00000636360 105 ntBASIC0.31□□□□□ -2.36
GABPAQ06546 SNORA20.1-201ENST00000364790 130 ntBASIC0.3□□□□□ -2.36
GABPAQ06546 RNU6-1336P-201ENST00000383886 109 ntBASIC0.3□□□□□ -2.36
GABPAQ06546 SNORD58.1-201ENST00000391313 66 ntBASIC0.3□□□□□ -2.36
GABPAQ06546 RNU5E-9P-201ENST00000411164 104 ntBASIC0.3□□□□□ -2.36
GABPAQ06546 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.3□□□□□ -2.36
GABPAQ06546 RNU4-71P-201ENST00000516258 113 ntBASIC0.3□□□□□ -2.36
GABPAQ06546 SCARNA15.1-201ENST00000516384 125 ntBASIC0.3□□□□□ -2.36
GABPAQ06546 RNA5SP134-201ENST00000516492 96 ntBASIC0.3□□□□□ -2.36
GABPAQ06546 MRPS18CP4-201ENST00000535821 231 ntBASIC0.3□□□□□ -2.36
GABPAQ06546 MIR8087-201ENST00000612745 78 ntBASIC0.3□□□□□ -2.36
GABPAQ06546 U4.1-201ENST00000620349 87 ntBASIC0.3□□□□□ -2.36
GABPAQ06546 AC090625.1-201ENST00000357130 210 ntBASIC0.29□□□□□ -2.36
GABPAQ06546 MIR103A1-201ENST00000362165 78 ntBASIC0.29□□□□□ -2.36
GABPAQ06546 SNORD44.1-201ENST00000363202 61 ntBASIC0.29□□□□□ -2.36
GABPAQ06546 RNU6-949P-201ENST00000384040 107 ntBASIC0.29□□□□□ -2.36
GABPAQ06546 Y_RNA.588-201ENST00000391254 102 ntBASIC0.29□□□□□ -2.36
GABPAQ06546 RNU6-111P-201ENST00000517179 105 ntBASIC0.29□□□□□ -2.36
GABPAQ06546 AC022523.2-201ENST00000561045 150 ntBASIC0.29□□□□□ -2.36
GABPAQ06546 Y_RNA.757-201ENST00000578934 114 ntBASIC0.29□□□□□ -2.36
GABPAQ06546 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.29□□□□□ -2.36
GABPAQ06546 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.29□□□□□ -2.36
GABPAQ06546 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.29□□□□□ -2.36
GABPAQ06546 RNY1P13-201ENST00000365030 105 ntBASIC0.28□□□□□ -2.36
GABPAQ06546 Y_RNA.412-201ENST00000384001 104 ntBASIC0.28□□□□□ -2.36
GABPAQ06546 RNY1P6-201ENST00000384193 109 ntBASIC0.28□□□□□ -2.36
GABPAQ06546 SNORA8.2-201ENST00000384372 139 ntBASIC0.28□□□□□ -2.36
GABPAQ06546 Y_RNA.680-201ENST00000516441 93 ntBASIC0.28□□□□□ -2.36
GABPAQ06546 RNU6-1258P-201ENST00000516911 111 ntBASIC0.28□□□□□ -2.36
GABPAQ06546 AC023932.2-201ENST00000603176 175 ntBASIC0.28□□□□□ -2.36
GABPAQ06546 MIR6718-201ENST00000616153 80 ntBASIC0.28□□□□□ -2.36
GABPAQ06546 Y_RNA.60-201ENST00000362831 98 ntBASIC0.27□□□□□ -2.37
GABPAQ06546 Y_RNA.75-201ENST00000362927 97 ntBASIC0.27□□□□□ -2.37
GABPAQ06546 Y_RNA.171-201ENST00000363760 102 ntBASIC0.27□□□□□ -2.37
GABPAQ06546 AL512326.2-201ENST00000426359 151 ntBASIC0.27□□□□□ -2.37
GABPAQ06546 SNRPGP12-201ENST00000449481 213 ntBASIC0.27□□□□□ -2.37
GABPAQ06546 RNU7-79P-201ENST00000516082 62 ntBASIC0.27□□□□□ -2.37
GABPAQ06546 RNU6-1023P-201ENST00000516137 106 ntBASIC0.27□□□□□ -2.37
GABPAQ06546 AP003327.1-201ENST00000529684 127 ntBASIC0.27□□□□□ -2.37
GABPAQ06546 MIR4514-201ENST00000581410 57 ntBASIC0.27□□□□□ -2.37
GABPAQ06546 SNORD118-201ENST00000363593 134 ntBASIC0.26□□□□□ -2.37
GABPAQ06546 RNU6-1086P-201ENST00000410930 100 ntBASIC0.26□□□□□ -2.37
GABPAQ06546 MIR4431-201ENST00000579990 94 ntBASIC0.26□□□□□ -2.37
GABPAQ06546 MIR2909-201ENST00000617113 69 ntBASIC0.26□□□□□ -2.37
GABPAQ06546 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.26□□□□□ -2.37
GABPAQ06546 RNA5SP457-201ENST00000363657 124 ntBASIC0.25□□□□□ -2.37
GABPAQ06546 Y_RNA.447-201ENST00000384184 113 ntBASIC0.25□□□□□ -2.37
GABPAQ06546 RNU6-918P-201ENST00000391219 106 ntBASIC0.25□□□□□ -2.37
GABPAQ06546 MIR1197-201ENST00000408818 88 ntBASIC0.25□□□□□ -2.37
GABPAQ06546 AL022718.1-201ENST00000412004 84 ntBASIC0.25□□□□□ -2.37
GABPAQ06546 AC096949.1-201ENST00000412047 152 ntBASIC0.25□□□□□ -2.37
GABPAQ06546 RNU7-113P-201ENST00000459273 62 ntBASIC0.25□□□□□ -2.37
GABPAQ06546 SNORA31.14-201ENST00000516728 116 ntBASIC0.25□□□□□ -2.37
GABPAQ06546 SNORA25.16-201ENST00000516741 121 ntBASIC0.25□□□□□ -2.37
GABPAQ06546 Y_RNA.697-201ENST00000516776 113 ntBASIC0.25□□□□□ -2.37
GABPAQ06546 RNU6-765P-201ENST00000516916 99 ntBASIC0.25□□□□□ -2.37
GABPAQ06546 Y_RNA.32-201ENST00000362589 110 ntBASIC0.24□□□□□ -2.37
GABPAQ06546 Y_RNA.52-201ENST00000362760 96 ntBASIC0.24□□□□□ -2.37
GABPAQ06546 Y_RNA.174-201ENST00000363781 105 ntBASIC0.24□□□□□ -2.37
GABPAQ06546 RNU6-702P-201ENST00000364982 107 ntBASIC0.24□□□□□ -2.37
GABPAQ06546 RNU6-1327P-201ENST00000365302 105 ntBASIC0.24□□□□□ -2.37
GABPAQ06546 RNU6-196P-201ENST00000384315 107 ntBASIC0.24□□□□□ -2.37
GABPAQ06546 RNA5SP144-201ENST00000410846 116 ntBASIC0.24□□□□□ -2.37
GABPAQ06546 MTND3P2-201ENST00000438452 342 ntBASIC0.24□□□□□ -2.37
GABPAQ06546 RNA5SP33-201ENST00000516687 98 ntBASIC0.24□□□□□ -2.37
GABPAQ06546 DEFB131E-201ENST00000532329 154 ntBASIC0.24□□□□□ -2.37
GABPAQ06546 MIR4503-201ENST00000582187 83 ntBASIC0.24□□□□□ -2.37
GABPAQ06546 RNU6-349P-201ENST00000362402 107 ntBASIC0.23□□□□□ -2.37
GABPAQ06546 Y_RNA.83-201ENST00000363005 113 ntBASIC0.23□□□□□ -2.37
GABPAQ06546 SNORA36.1-201ENST00000363424 132 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 260.6 ms