Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MIR3973-201ENST00000579824 107 ntBASIC0.83□□□□□ -2.28
CLDN20P56880 MIR373-201ENST00000362273 69 ntBASIC0.82□□□□□ -2.28
CLDN20P56880 RNU1-36P-201ENST00000365130 165 ntBASIC0.82□□□□□ -2.28
CLDN20P56880 MIR520E-201ENST00000384867 87 ntBASIC0.82□□□□□ -2.28
CLDN20P56880 MIR532-201ENST00000385025 91 ntBASIC0.82□□□□□ -2.28
CLDN20P56880 RNU7-164P-201ENST00000459221 62 ntBASIC0.82□□□□□ -2.28
CLDN20P56880 MIR4452-201ENST00000583004 71 ntBASIC0.82□□□□□ -2.28
CLDN20P56880 SNORA4-201ENST00000584302 138 ntBASIC0.82□□□□□ -2.28
CLDN20P56880 AC023934.1-201ENST00000574529 2389 ntBASIC0.82□□□□□ -2.28
CLDN20P56880 Y_RNA.531-201ENST00000384589 121 ntBASIC0.81□□□□□ -2.28
CLDN20P56880 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.81□□□□□ -2.28
CLDN20P56880 RNU7-185P-201ENST00000459215 60 ntBASIC0.81□□□□□ -2.28
CLDN20P56880 RNU5E-3P-201ENST00000515913 68 ntBASIC0.81□□□□□ -2.28
CLDN20P56880 RNU6-977P-201ENST00000516411 103 ntBASIC0.81□□□□□ -2.28
CLDN20P56880 RNU2-35P-201ENST00000516446 142 ntBASIC0.81□□□□□ -2.28
CLDN20P56880 AC004812.1-201ENST00000540773 146 ntBASIC0.81□□□□□ -2.28
CLDN20P56880 AC141846.1-201ENST00000568348 142 ntBASIC0.81□□□□□ -2.28
CLDN20P56880 MIR4698-201ENST00000577795 80 ntBASIC0.81□□□□□ -2.28
CLDN20P56880 MIR4676-201ENST00000583078 72 ntBASIC0.81□□□□□ -2.28
CLDN20P56880 AC020891.4-201ENST00000605745 93 ntBASIC0.81□□□□□ -2.28
CLDN20P56880 Y_RNA.224-201ENST00000364308 111 ntBASIC0.8□□□□□ -2.28
CLDN20P56880 Y_RNA.343-201ENST00000365354 112 ntBASIC0.8□□□□□ -2.28
CLDN20P56880 Y_RNA.366-201ENST00000365540 102 ntBASIC0.8□□□□□ -2.28
CLDN20P56880 Y_RNA.470-201ENST00000384307 117 ntBASIC0.8□□□□□ -2.28
CLDN20P56880 Y_RNA.506-201ENST00000384494 102 ntBASIC0.8□□□□□ -2.28
CLDN20P56880 RNU6-342P-201ENST00000384521 104 ntBASIC0.8□□□□□ -2.28
CLDN20P56880 SNORD105-201ENST00000386910 85 ntBASIC0.8□□□□□ -2.28
CLDN20P56880 MIR1257-201ENST00000408490 117 ntBASIC0.8□□□□□ -2.28
CLDN20P56880 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.8□□□□□ -2.28
CLDN20P56880 RNU6-1086P-201ENST00000410930 100 ntBASIC0.8□□□□□ -2.28
CLDN20P56880 AL512326.2-201ENST00000426359 151 ntBASIC0.8□□□□□ -2.28
CLDN20P56880 RPL39P25-201ENST00000449384 154 ntBASIC0.8□□□□□ -2.28
CLDN20P56880 RNU6-426P-201ENST00000516464 97 ntBASIC0.8□□□□□ -2.28
CLDN20P56880 RNA5SP33-201ENST00000516687 98 ntBASIC0.8□□□□□ -2.28
CLDN20P56880 AC108081.1-201ENST00000604358 221 ntBASIC0.8□□□□□ -2.28
CLDN20P56880 U7.2-201ENST00000607576 63 ntBASIC0.8□□□□□ -2.28
CLDN20P56880 AL137067.1-201ENST00000615933 120 ntBASIC0.8□□□□□ -2.28
CLDN20P56880 Y_RNA.298-201ENST00000364960 107 ntBASIC0.79□□□□□ -2.28
CLDN20P56880 RNU6-1335P-201ENST00000365426 107 ntBASIC0.79□□□□□ -2.28
CLDN20P56880 MIR938-201ENST00000401216 83 ntBASIC0.79□□□□□ -2.28
CLDN20P56880 AC015818.7-201ENST00000428754 109 ntBASIC0.79□□□□□ -2.28
CLDN20P56880 AC087499.7-201ENST00000441958 109 ntBASIC0.79□□□□□ -2.28
CLDN20P56880 RNU7-123P-201ENST00000515911 60 ntBASIC0.79□□□□□ -2.28
CLDN20P56880 RNU7-35P-201ENST00000517174 62 ntBASIC0.79□□□□□ -2.28
CLDN20P56880 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.79□□□□□ -2.28
CLDN20P56880 MIR4804-201ENST00000581683 73 ntBASIC0.79□□□□□ -2.28
CLDN20P56880 AL353765.1-201ENST00000605514 183 ntBASIC0.79□□□□□ -2.28
CLDN20P56880 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.79□□□□□ -2.28
CLDN20P56880 MIR6857-201ENST00000613267 93 ntBASIC0.79□□□□□ -2.28
CLDN20P56880 RMST_2.1-201ENST00000617263 136 ntBASIC0.79□□□□□ -2.28
CLDN20P56880 RNU6-949P-201ENST00000384040 107 ntBASIC0.78□□□□□ -2.28
CLDN20P56880 MIR608-201ENST00000384820 100 ntBASIC0.78□□□□□ -2.28
CLDN20P56880 MIR520F-201ENST00000384824 87 ntBASIC0.78□□□□□ -2.28
CLDN20P56880 MIR125B2-201ENST00000385128 89 ntBASIC0.78□□□□□ -2.28
CLDN20P56880 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.78□□□□□ -2.28
CLDN20P56880 RPS29P1-201ENST00000465274 159 ntBASIC0.78□□□□□ -2.28
CLDN20P56880 Y_RNA.114-201ENST00000363265 113 ntBASIC0.77□□□□□ -2.29
CLDN20P56880 RNU6-647P-201ENST00000364243 107 ntBASIC0.77□□□□□ -2.29
CLDN20P56880 Y_RNA.299-201ENST00000364973 94 ntBASIC0.77□□□□□ -2.29
CLDN20P56880 RNY1P13-201ENST00000365030 105 ntBASIC0.77□□□□□ -2.29
CLDN20P56880 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
CLDN20P56880 MIR146A-201ENST00000385201 99 ntBASIC0.77□□□□□ -2.29
CLDN20P56880 SNORD99-201ENST00000408612 74 ntBASIC0.77□□□□□ -2.29
CLDN20P56880 RNU7-79P-201ENST00000516082 62 ntBASIC0.77□□□□□ -2.29
CLDN20P56880 ACA64.5-201ENST00000516207 127 ntBASIC0.77□□□□□ -2.29
CLDN20P56880 RNU6-346P-201ENST00000516288 111 ntBASIC0.77□□□□□ -2.29
CLDN20P56880 RNY4P20-201ENST00000516678 93 ntBASIC0.77□□□□□ -2.29
CLDN20P56880 AC013244.2-201ENST00000603396 103 ntBASIC0.77□□□□□ -2.29
CLDN20P56880 AC211469.2-201ENST00000605461 205 ntBASIC0.77□□□□□ -2.29
CLDN20P56880 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.77□□□□□ -2.29
CLDN20P56880 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
CLDN20P56880 Y_RNA.280-201ENST00000364765 112 ntBASIC0.76□□□□□ -2.29
CLDN20P56880 RNU6-1062P-201ENST00000383908 107 ntBASIC0.76□□□□□ -2.29
CLDN20P56880 Y_RNA.568-201ENST00000384742 113 ntBASIC0.76□□□□□ -2.29
CLDN20P56880 U8.15-201ENST00000390947 134 ntBASIC0.76□□□□□ -2.29
CLDN20P56880 SNORD93-201ENST00000408813 74 ntBASIC0.76□□□□□ -2.29
CLDN20P56880 RNU7-56P-201ENST00000458744 62 ntBASIC0.76□□□□□ -2.29
CLDN20P56880 MIR548AE2-201ENST00000583456 67 ntBASIC0.76□□□□□ -2.29
CLDN20P56880 FAM71BP1-201ENST00000604431 523 ntBASIC0.76□□□□□ -2.29
CLDN20P56880 TUG1_4.1-201ENST00000619464 181 ntBASIC0.76□□□□□ -2.29
CLDN20P56880 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.76□□□□□ -2.29
CLDN20P56880 SNORD114-2-201ENST00000363953 78 ntBASIC0.75□□□□□ -2.29
CLDN20P56880 RNU6-364P-201ENST00000384387 107 ntBASIC0.75□□□□□ -2.29
CLDN20P56880 MIR520H-201ENST00000385126 88 ntBASIC0.75□□□□□ -2.29
CLDN20P56880 RNU1-119P-201ENST00000391122 165 ntBASIC0.75□□□□□ -2.29
CLDN20P56880 RNU4-69P-201ENST00000410677 143 ntBASIC0.75□□□□□ -2.29
CLDN20P56880 RNA5SP272-201ENST00000516095 111 ntBASIC0.75□□□□□ -2.29
CLDN20P56880 RNU7-156P-201ENST00000517214 74 ntBASIC0.75□□□□□ -2.29
CLDN20P56880 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.75□□□□□ -2.29
CLDN20P56880 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
CLDN20P56880 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.74□□□□□ -2.29
CLDN20P56880 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
CLDN20P56880 SNORA32-201ENST00000384072 121 ntBASIC0.74□□□□□ -2.29
CLDN20P56880 SNORA40-201ENST00000388090 126 ntBASIC0.74□□□□□ -2.29
CLDN20P56880 RNU6-447P-201ENST00000410293 104 ntBASIC0.74□□□□□ -2.29
CLDN20P56880 RNU6-1118P-201ENST00000410382 104 ntBASIC0.74□□□□□ -2.29
CLDN20P56880 RNU6-1076P-201ENST00000410397 104 ntBASIC0.74□□□□□ -2.29
CLDN20P56880 RNU6-355P-201ENST00000410427 104 ntBASIC0.74□□□□□ -2.29
CLDN20P56880 RNU6-791P-201ENST00000410467 104 ntBASIC0.74□□□□□ -2.29
CLDN20P56880 RNU6-705P-201ENST00000410601 104 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 280 ms