Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 SNORD100-201ENST00000408573 76 ntBASIC3.3□□□□□ -1.88
PSEN1P49768 AC115115.1-201ENST00000449927 248 ntBASIC3.3□□□□□ -1.88
PSEN1P49768 RNU7-195P-201ENST00000458793 62 ntBASIC3.3□□□□□ -1.88
PSEN1P49768 SCARNA20.6-201ENST00000517251 106 ntBASIC3.3□□□□□ -1.88
PSEN1P49768 MIR4325-201ENST00000583049 90 ntBASIC3.3□□□□□ -1.88
PSEN1P49768 AL049779.4-201ENST00000604500 156 ntBASIC3.3□□□□□ -1.88
PSEN1P49768 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.29□□□□□ -1.88
PSEN1P49768 RNA5SP374-201ENST00000362939 125 ntBASIC3.29□□□□□ -1.88
PSEN1P49768 SNORA25.3-201ENST00000363205 127 ntBASIC3.29□□□□□ -1.88
PSEN1P49768 Y_RNA.536-201ENST00000384621 113 ntBASIC3.29□□□□□ -1.88
PSEN1P49768 MIR519A1-201ENST00000385257 85 ntBASIC3.29□□□□□ -1.88
PSEN1P49768 Y_RNA.588-201ENST00000391254 102 ntBASIC3.29□□□□□ -1.88
PSEN1P49768 SNORD93-201ENST00000408813 74 ntBASIC3.29□□□□□ -1.88
PSEN1P49768 AP004217.1-201ENST00000480579 346 ntBASIC3.29□□□□□ -1.88
PSEN1P49768 TRAJ51-201ENST00000504127 63 ntBASIC3.29□□□□□ -1.88
PSEN1P49768 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.29□□□□□ -1.88
PSEN1P49768 MIR4446-201ENST00000578505 67 ntBASIC3.29□□□□□ -1.88
PSEN1P49768 MIR8053-201ENST00000613344 75 ntBASIC3.29□□□□□ -1.88
PSEN1P49768 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PSEN1P49768 MIR101-2-201ENST00000362195 79 ntBASIC3.28□□□□□ -1.88
PSEN1P49768 SNORD45A-201ENST00000384512 84 ntBASIC3.28□□□□□ -1.88
PSEN1P49768 AC092628.1-201ENST00000436250 252 ntBASIC3.28□□□□□ -1.88
PSEN1P49768 RN7SL274P-201ENST00000492268 272 ntBASIC3.28□□□□□ -1.88
PSEN1P49768 MIR548H5-201ENST00000580314 60 ntBASIC3.28□□□□□ -1.88
PSEN1P49768 MIR3200-201ENST00000580767 85 ntBASIC3.28□□□□□ -1.88
PSEN1P49768 uc_338.6-201ENST00000613544 171 ntBASIC3.28□□□□□ -1.88
PSEN1P49768 GS1-279B7.1-204ENST00000641809 378 ntBASIC3.28□□□□□ -1.88
PSEN1P49768 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PSEN1P49768 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.28□□□□□ -1.88
PSEN1P49768 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PSEN1P49768 RNU6-664P-201ENST00000362381 107 ntBASIC3.27□□□□□ -1.89
PSEN1P49768 MIR513A1-201ENST00000385138 129 ntBASIC3.27□□□□□ -1.89
PSEN1P49768 RNA5SP270-201ENST00000411361 118 ntBASIC3.27□□□□□ -1.89
PSEN1P49768 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.27□□□□□ -1.89
PSEN1P49768 Y_RNA.809-201ENST00000516058 95 ntBASIC3.27□□□□□ -1.89
PSEN1P49768 RNU6-922P-201ENST00000516753 99 ntBASIC3.27□□□□□ -1.89
PSEN1P49768 RNU2-19P-201ENST00000517288 84 ntBASIC3.27□□□□□ -1.89
PSEN1P49768 AC010297.1-201ENST00000623948 149 ntBASIC3.27□□□□□ -1.89
PSEN1P49768 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
PSEN1P49768 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
PSEN1P49768 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PSEN1P49768 MIR422A-201ENST00000362286 90 ntBASIC3.26□□□□□ -1.89
PSEN1P49768 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.26□□□□□ -1.89
PSEN1P49768 RNU6-141P-201ENST00000410499 105 ntBASIC3.26□□□□□ -1.89
PSEN1P49768 S100A11P2-201ENST00000467589 312 ntBASIC3.26□□□□□ -1.89
PSEN1P49768 RNA5SP217-201ENST00000515959 91 ntBASIC3.26□□□□□ -1.89
PSEN1P49768 RNU6-881P-201ENST00000516813 102 ntBASIC3.26□□□□□ -1.89
PSEN1P49768 MIR4696-201ENST00000581431 70 ntBASIC3.26□□□□□ -1.89
PSEN1P49768 MIR3140-201ENST00000583685 90 ntBASIC3.26□□□□□ -1.89
PSEN1P49768 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
PSEN1P49768 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PSEN1P49768 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PSEN1P49768 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.25□□□□□ -1.89
PSEN1P49768 RNU6-403P-201ENST00000363163 104 ntBASIC3.25□□□□□ -1.89
PSEN1P49768 SNORD101-201ENST00000384027 73 ntBASIC3.25□□□□□ -1.89
PSEN1P49768 U8.13-201ENST00000390842 128 ntBASIC3.25□□□□□ -1.89
PSEN1P49768 AC097510.1-201ENST00000510945 133 ntBASIC3.25□□□□□ -1.89
PSEN1P49768 AL162274.2-201ENST00000614406 332 ntBASIC3.25□□□□□ -1.89
PSEN1P49768 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.25□□□□□ -1.89
PSEN1P49768 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PSEN1P49768 MIR337-201ENST00000362281 93 ntBASIC3.24□□□□□ -1.89
PSEN1P49768 RNU6-1260P-201ENST00000362944 107 ntBASIC3.24□□□□□ -1.89
PSEN1P49768 SNORD45.1-201ENST00000363181 77 ntBASIC3.24□□□□□ -1.89
PSEN1P49768 RNU1-36P-201ENST00000365130 165 ntBASIC3.24□□□□□ -1.89
PSEN1P49768 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
PSEN1P49768 AL606490.4-201ENST00000423117 127 ntBASIC3.24□□□□□ -1.89
PSEN1P49768 MIR4658-201ENST00000584344 65 ntBASIC3.24□□□□□ -1.89
PSEN1P49768 DLEU2_3.1-201ENST00000620005 73 ntBASIC3.24□□□□□ -1.89
PSEN1P49768 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PSEN1P49768 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PSEN1P49768 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PSEN1P49768 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.23□□□□□ -1.89
PSEN1P49768 MIR377-201ENST00000362145 69 ntBASIC3.23□□□□□ -1.89
PSEN1P49768 SNORA71.1-201ENST00000364523 117 ntBASIC3.23□□□□□ -1.89
PSEN1P49768 SNORA46-201ENST00000384762 135 ntBASIC3.23□□□□□ -1.89
PSEN1P49768 MIR18B-201ENST00000454574 71 ntBASIC3.23□□□□□ -1.89
PSEN1P49768 AC008885.1-201ENST00000514930 301 ntBASIC3.23□□□□□ -1.89
PSEN1P49768 RNA5SP341-201ENST00000516261 117 ntBASIC3.23□□□□□ -1.89
PSEN1P49768 MIR5089-201ENST00000580047 84 ntBASIC3.23□□□□□ -1.89
PSEN1P49768 AL627230.6-201ENST00000611129 280 ntBASIC3.23□□□□□ -1.89
PSEN1P49768 AC103706.3-201ENST00000636297 85 ntBASIC3.23□□□□□ -1.89
PSEN1P49768 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
PSEN1P49768 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.22□□□□□ -1.89
PSEN1P49768 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PSEN1P49768 RNU6-525P-201ENST00000363685 104 ntBASIC3.22□□□□□ -1.89
PSEN1P49768 RNA5SP450-201ENST00000411206 102 ntBASIC3.22□□□□□ -1.89
PSEN1P49768 AL161935.2-201ENST00000414627 60 ntBASIC3.22□□□□□ -1.89
PSEN1P49768 UQCRHP3-201ENST00000451503 251 ntBASIC3.22□□□□□ -1.89
PSEN1P49768 MIR4511-201ENST00000582784 87 ntBASIC3.22□□□□□ -1.89
PSEN1P49768 U6.81-201ENST00000612550 106 ntBASIC3.22□□□□□ -1.89
PSEN1P49768 MIR6516-201ENST00000630554 81 ntBASIC3.22□□□□□ -1.89
PSEN1P49768 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PSEN1P49768 MIR22-201ENST00000362190 85 ntBASIC3.21□□□□□ -1.9
PSEN1P49768 RNA5SP393-201ENST00000363423 117 ntBASIC3.21□□□□□ -1.9
PSEN1P49768 SNORD115-22-201ENST00000364456 82 ntBASIC3.21□□□□□ -1.9
PSEN1P49768 AC107016.2-201ENST00000547968 190 ntBASIC3.21□□□□□ -1.9
PSEN1P49768 EIF4BP1-201ENST00000554881 351 ntBASIC3.21□□□□□ -1.9
PSEN1P49768 AC013244.2-201ENST00000603396 103 ntBASIC3.21□□□□□ -1.9
PSEN1P49768 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
PSEN1P49768 RNU6-1216P-201ENST00000362590 107 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms