Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 RNA5SP102-201ENST00000516865 106 ntBASIC0.96□□□□□ -2.26
CENPAP49450 AC108081.1-201ENST00000604358 221 ntBASIC0.96□□□□□ -2.26
CENPAP49450 AC103810.9-201ENST00000606688 112 ntBASIC0.96□□□□□ -2.26
CENPAP49450 AL136317.1-201ENST00000612653 226 ntBASIC0.96□□□□□ -2.26
CENPAP49450 uc_338.6-201ENST00000613544 171 ntBASIC0.96□□□□□ -2.26
CENPAP49450 TUG1_4.1-201ENST00000619464 181 ntBASIC0.96□□□□□ -2.26
CENPAP49450 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
CENPAP49450 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
CENPAP49450 Y_RNA.118-201ENST00000363300 101 ntBASIC0.95□□□□□ -2.26
CENPAP49450 Y_RNA.191-201ENST00000363972 113 ntBASIC0.95□□□□□ -2.26
CENPAP49450 RNU6-342P-201ENST00000384521 104 ntBASIC0.95□□□□□ -2.26
CENPAP49450 MIR18B-201ENST00000454574 71 ntBASIC0.95□□□□□ -2.26
CENPAP49450 AC087343.1-201ENST00000477341 475 ntBASIC0.95□□□□□ -2.26
CENPAP49450 AC004812.1-201ENST00000540773 146 ntBASIC0.95□□□□□ -2.26
CENPAP49450 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
CENPAP49450 AC023934.1-201ENST00000574529 2389 ntBASIC0.94□□□□□ -2.26
CENPAP49450 Y_RNA.224-201ENST00000364308 111 ntBASIC0.94□□□□□ -2.26
CENPAP49450 RNU6-53P-201ENST00000365367 106 ntBASIC0.94□□□□□ -2.26
CENPAP49450 Y_RNA.470-201ENST00000384307 117 ntBASIC0.94□□□□□ -2.26
CENPAP49450 Y_RNA.531-201ENST00000384589 121 ntBASIC0.94□□□□□ -2.26
CENPAP49450 RPS26P5-201ENST00000418544 335 ntBASIC0.94□□□□□ -2.26
CENPAP49450 MTND4LP9-201ENST00000427694 174 ntBASIC0.94□□□□□ -2.26
CENPAP49450 RNU7-123P-201ENST00000515911 60 ntBASIC0.94□□□□□ -2.26
CENPAP49450 RNU6-977P-201ENST00000516411 103 ntBASIC0.94□□□□□ -2.26
CENPAP49450 MIR4452-201ENST00000583004 71 ntBASIC0.94□□□□□ -2.26
CENPAP49450 SNORD114-21-201ENST00000606412 72 ntBASIC0.94□□□□□ -2.26
CENPAP49450 AL662814.1-201ENST00000617364 121 ntBASIC0.94□□□□□ -2.26
CENPAP49450 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
CENPAP49450 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.93□□□□□ -2.26
CENPAP49450 RNU6-647P-201ENST00000364243 107 ntBASIC0.93□□□□□ -2.26
CENPAP49450 Y_RNA.298-201ENST00000364960 107 ntBASIC0.93□□□□□ -2.26
CENPAP49450 RNU6-1335P-201ENST00000365426 107 ntBASIC0.93□□□□□ -2.26
CENPAP49450 SNORA32-201ENST00000384072 121 ntBASIC0.93□□□□□ -2.26
CENPAP49450 RNU6-746P-201ENST00000384112 109 ntBASIC0.93□□□□□ -2.26
CENPAP49450 MIR563-201ENST00000385080 79 ntBASIC0.93□□□□□ -2.26
CENPAP49450 MT-TF-201ENST00000387314 71 ntBASIC0.93□□□□□ -2.26
CENPAP49450 MIR548M-201ENST00000408260 86 ntBASIC0.93□□□□□ -2.26
CENPAP49450 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.93□□□□□ -2.26
CENPAP49450 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.93□□□□□ -2.26
CENPAP49450 U7.7-201ENST00000459276 60 ntBASIC0.93□□□□□ -2.26
CENPAP49450 ACA64.5-201ENST00000516207 127 ntBASIC0.93□□□□□ -2.26
CENPAP49450 AC141846.1-201ENST00000568348 142 ntBASIC0.93□□□□□ -2.26
CENPAP49450 SNORA4-201ENST00000584302 138 ntBASIC0.93□□□□□ -2.26
CENPAP49450 AC211469.2-201ENST00000605461 205 ntBASIC0.93□□□□□ -2.26
CENPAP49450 MIR30D-201ENST00000362283 70 ntBASIC0.92□□□□□ -2.26
CENPAP49450 MIR489-201ENST00000384923 84 ntBASIC0.92□□□□□ -2.26
CENPAP49450 MIR1257-201ENST00000408490 117 ntBASIC0.92□□□□□ -2.26
CENPAP49450 MIR1827-201ENST00000408549 66 ntBASIC0.92□□□□□ -2.26
CENPAP49450 RNU6-257P-201ENST00000410238 98 ntBASIC0.92□□□□□ -2.26
CENPAP49450 RNU6-1086P-201ENST00000410930 100 ntBASIC0.92□□□□□ -2.26
CENPAP49450 RNU6-1110P-201ENST00000516462 101 ntBASIC0.92□□□□□ -2.26
CENPAP49450 RNY4P20-201ENST00000516678 93 ntBASIC0.92□□□□□ -2.26
CENPAP49450 MIR4653-201ENST00000585107 83 ntBASIC0.92□□□□□ -2.26
CENPAP49450 RNU6-235P-201ENST00000362644 107 ntBASIC0.91□□□□□ -2.26
CENPAP49450 SNORD115-2-201ENST00000362842 82 ntBASIC0.91□□□□□ -2.26
CENPAP49450 SNORD115-20-201ENST00000365099 82 ntBASIC0.91□□□□□ -2.26
CENPAP49450 MIR605-201ENST00000385078 83 ntBASIC0.91□□□□□ -2.26
CENPAP49450 SNORD93-201ENST00000408813 74 ntBASIC0.91□□□□□ -2.26
CENPAP49450 AL158147.1-201ENST00000443970 75 ntBASIC0.91□□□□□ -2.26
CENPAP49450 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.91□□□□□ -2.26
CENPAP49450 RNU6-1211P-201ENST00000459179 105 ntBASIC0.91□□□□□ -2.26
CENPAP49450 RNU7-185P-201ENST00000459215 60 ntBASIC0.91□□□□□ -2.26
CENPAP49450 RN7SKP19-201ENST00000516016 252 ntBASIC0.91□□□□□ -2.26
CENPAP49450 RNA5SP255-201ENST00000516370 107 ntBASIC0.91□□□□□ -2.26
CENPAP49450 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.91□□□□□ -2.26
CENPAP49450 MIR4676-201ENST00000583078 72 ntBASIC0.91□□□□□ -2.26
CENPAP49450 MIR548AE2-201ENST00000583456 67 ntBASIC0.91□□□□□ -2.26
CENPAP49450 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.91□□□□□ -2.26
CENPAP49450 MIR520F-201ENST00000384824 87 ntBASIC0.9□□□□□ -2.27
CENPAP49450 RNU7-79P-201ENST00000516082 62 ntBASIC0.9□□□□□ -2.27
CENPAP49450 AC025627.3-201ENST00000582078 182 ntBASIC0.9□□□□□ -2.27
CENPAP49450 AC020891.4-201ENST00000605745 93 ntBASIC0.9□□□□□ -2.27
CENPAP49450 AL589743.1-201ENST00000551932 2712 ntBASIC0.9□□□□□ -2.27
CENPAP49450 Y_RNA.299-201ENST00000364973 94 ntBASIC0.89□□□□□ -2.27
CENPAP49450 RNU6-187P-201ENST00000384139 106 ntBASIC0.89□□□□□ -2.27
CENPAP49450 RNU6-364P-201ENST00000384387 107 ntBASIC0.89□□□□□ -2.27
CENPAP49450 MIR613-201ENST00000385248 95 ntBASIC0.89□□□□□ -2.27
CENPAP49450 MIR1263-201ENST00000408324 86 ntBASIC0.89□□□□□ -2.27
CENPAP49450 RNU6-1061P-201ENST00000516530 99 ntBASIC0.89□□□□□ -2.27
CENPAP49450 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
CENPAP49450 HSBP1P2-201ENST00000299671 229 ntBASIC0.88□□□□□ -2.27
CENPAP49450 RNU4-38P-201ENST00000364472 129 ntBASIC0.88□□□□□ -2.27
CENPAP49450 RNU1-93P-201ENST00000364704 169 ntBASIC0.88□□□□□ -2.27
CENPAP49450 MIR539-201ENST00000365690 78 ntBASIC0.88□□□□□ -2.27
CENPAP49450 SNORD105-201ENST00000386910 85 ntBASIC0.88□□□□□ -2.27
CENPAP49450 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.88□□□□□ -2.27
CENPAP49450 RNU7-35P-201ENST00000517174 62 ntBASIC0.88□□□□□ -2.27
CENPAP49450 IGKV1-22-201ENST00000524313 326 ntBASIC0.88□□□□□ -2.27
CENPAP49450 AC022523.2-201ENST00000561045 150 ntBASIC0.88□□□□□ -2.27
CENPAP49450 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.88□□□□□ -2.27
CENPAP49450 RNY1P13-201ENST00000365030 105 ntBASIC0.87□□□□□ -2.27
CENPAP49450 SNORD114-22-201ENST00000365423 72 ntBASIC0.87□□□□□ -2.27
CENPAP49450 RNU6-949P-201ENST00000384040 107 ntBASIC0.87□□□□□ -2.27
CENPAP49450 MIR125B2-201ENST00000385128 89 ntBASIC0.87□□□□□ -2.27
CENPAP49450 MIR146A-201ENST00000385201 99 ntBASIC0.87□□□□□ -2.27
CENPAP49450 MIR759-201ENST00000390224 91 ntBASIC0.87□□□□□ -2.27
CENPAP49450 U8.15-201ENST00000390947 134 ntBASIC0.87□□□□□ -2.27
CENPAP49450 Y_RNA.586-201ENST00000391146 98 ntBASIC0.87□□□□□ -2.27
CENPAP49450 MIR938-201ENST00000401216 83 ntBASIC0.87□□□□□ -2.27
CENPAP49450 RNU4-69P-201ENST00000410677 143 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 438 ms