Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 MTATP8P2-201ENST00000435212 202 ntBASIC1.84□□□□□ -2.11
SLC6A11P48066 RPL39P39-201ENST00000455840 151 ntBASIC1.84□□□□□ -2.11
SLC6A11P48066 snoU13.9-201ENST00000458927 103 ntBASIC1.84□□□□□ -2.11
SLC6A11P48066 RNA5SP364-201ENST00000516938 78 ntBASIC1.84□□□□□ -2.11
SLC6A11P48066 RNU7-35P-201ENST00000517174 62 ntBASIC1.84□□□□□ -2.11
SLC6A11P48066 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
SLC6A11P48066 Y_RNA.93-201ENST00000363066 109 ntBASIC1.83□□□□□ -2.12
SLC6A11P48066 MIR206-201ENST00000384872 86 ntBASIC1.83□□□□□ -2.12
SLC6A11P48066 Y_RNA.659-201ENST00000515994 113 ntBASIC1.83□□□□□ -2.12
SLC6A11P48066 RNU7-79P-201ENST00000516082 62 ntBASIC1.83□□□□□ -2.12
SLC6A11P48066 RNU7-2P-201ENST00000516096 62 ntBASIC1.83□□□□□ -2.12
SLC6A11P48066 RNU6-795P-201ENST00000516323 103 ntBASIC1.83□□□□□ -2.12
SLC6A11P48066 SNORD67.1-201ENST00000516618 108 ntBASIC1.83□□□□□ -2.12
SLC6A11P48066 SNORA44.1-201ENST00000517031 108 ntBASIC1.83□□□□□ -2.12
SLC6A11P48066 MIR4448-201ENST00000584360 86 ntBASIC1.83□□□□□ -2.12
SLC6A11P48066 AC103810.8-201ENST00000607347 118 ntBASIC1.83□□□□□ -2.12
SLC6A11P48066 MIR2052-201ENST00000636055 55 ntBASIC1.83□□□□□ -2.12
SLC6A11P48066 MIR378A-201ENST00000362177 66 ntBASIC1.82□□□□□ -2.12
SLC6A11P48066 SNORD115-35-201ENST00000365122 82 ntBASIC1.82□□□□□ -2.12
SLC6A11P48066 MIR488-201ENST00000365739 83 ntBASIC1.82□□□□□ -2.12
SLC6A11P48066 RNU6-1201P-201ENST00000384227 107 ntBASIC1.82□□□□□ -2.12
SLC6A11P48066 RNU6-49P-201ENST00000384256 107 ntBASIC1.82□□□□□ -2.12
SLC6A11P48066 AC027119.1-201ENST00000440877 241 ntBASIC1.82□□□□□ -2.12
SLC6A11P48066 RNU6-158P-201ENST00000517104 100 ntBASIC1.82□□□□□ -2.12
SLC6A11P48066 AC105081.1-201ENST00000617727 106 ntBASIC1.82□□□□□ -2.12
SLC6A11P48066 Y_RNA.118-201ENST00000363300 101 ntBASIC1.81□□□□□ -2.12
SLC6A11P48066 SNORA16.1-201ENST00000364597 132 ntBASIC1.81□□□□□ -2.12
SLC6A11P48066 MIR30A-201ENST00000385092 71 ntBASIC1.81□□□□□ -2.12
SLC6A11P48066 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.81□□□□□ -2.12
SLC6A11P48066 MIR3937-201ENST00000580135 106 ntBASIC1.81□□□□□ -2.12
SLC6A11P48066 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SLC6A11P48066 Y_RNA.220-201ENST00000364244 109 ntBASIC1.8□□□□□ -2.12
SLC6A11P48066 RNU6-294P-201ENST00000364999 102 ntBASIC1.8□□□□□ -2.12
SLC6A11P48066 Y_RNA.448-201ENST00000384185 108 ntBASIC1.8□□□□□ -2.12
SLC6A11P48066 AC079140.2-201ENST00000506193 142 ntBASIC1.8□□□□□ -2.12
SLC6A11P48066 RNU6-1018P-201ENST00000516577 106 ntBASIC1.8□□□□□ -2.12
SLC6A11P48066 PRELID3BP2-201ENST00000605362 201 ntBASIC1.8□□□□□ -2.12
SLC6A11P48066 AL161722.3-201ENST00000605789 2983 ntBASIC1.8□□□□□ -2.12
SLC6A11P48066 AL442128.1-201ENST00000615151 90 ntBASIC1.8□□□□□ -2.12
SLC6A11P48066 AC012531.4-201ENST00000616509 177 ntBASIC1.8□□□□□ -2.12
SLC6A11P48066 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.8□□□□□ -2.12
SLC6A11P48066 RNU6-1313P-201ENST00000362622 102 ntBASIC1.79□□□□□ -2.12
SLC6A11P48066 SNORD45B-201ENST00000364617 72 ntBASIC1.79□□□□□ -2.12
SLC6A11P48066 RNU6-865P-201ENST00000364772 107 ntBASIC1.79□□□□□ -2.12
SLC6A11P48066 RNY1P7-201ENST00000384743 110 ntBASIC1.79□□□□□ -2.12
SLC6A11P48066 RNU6-1307P-201ENST00000391012 103 ntBASIC1.79□□□□□ -2.12
SLC6A11P48066 SUMO2P12-201ENST00000405924 140 ntBASIC1.79□□□□□ -2.12
SLC6A11P48066 RNU2-40P-201ENST00000410833 196 ntBASIC1.79□□□□□ -2.12
SLC6A11P48066 BTF3P4-201ENST00000418852 495 ntBASIC1.79□□□□□ -2.12
SLC6A11P48066 RNU7-61P-201ENST00000515897 61 ntBASIC1.79□□□□□ -2.12
SLC6A11P48066 SNORA72.7-201ENST00000516349 94 ntBASIC1.79□□□□□ -2.12
SLC6A11P48066 AC096720.1-201ENST00000604441 183 ntBASIC1.79□□□□□ -2.12
SLC6A11P48066 MALAT1.1-201ENST00000618249 95 ntBASIC1.79□□□□□ -2.12
SLC6A11P48066 uc_338.20-201ENST00000621563 178 ntBASIC1.79□□□□□ -2.12
SLC6A11P48066 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SLC6A11P48066 RNU6-170P-201ENST00000362832 104 ntBASIC1.78□□□□□ -2.12
SLC6A11P48066 RNY1P10-201ENST00000363268 113 ntBASIC1.78□□□□□ -2.12
SLC6A11P48066 SNORD1A-201ENST00000364968 72 ntBASIC1.78□□□□□ -2.12
SLC6A11P48066 RNU6-396P-201ENST00000365369 105 ntBASIC1.78□□□□□ -2.12
SLC6A11P48066 Y_RNA.377-201ENST00000365644 108 ntBASIC1.78□□□□□ -2.12
SLC6A11P48066 Y_RNA.508-201ENST00000384502 114 ntBASIC1.78□□□□□ -2.12
SLC6A11P48066 RNU4-62P-201ENST00000410125 130 ntBASIC1.78□□□□□ -2.12
SLC6A11P48066 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.78□□□□□ -2.12
SLC6A11P48066 RNU7-137P-201ENST00000516788 62 ntBASIC1.78□□□□□ -2.12
SLC6A11P48066 AC141846.1-201ENST00000568348 142 ntBASIC1.78□□□□□ -2.12
SLC6A11P48066 MIR4419B-201ENST00000577260 68 ntBASIC1.78□□□□□ -2.12
SLC6A11P48066 MIR4303-201ENST00000581299 66 ntBASIC1.78□□□□□ -2.12
SLC6A11P48066 MIR548Z-201ENST00000584743 97 ntBASIC1.78□□□□□ -2.12
SLC6A11P48066 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.78□□□□□ -2.12
SLC6A11P48066 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.78□□□□□ -2.12
SLC6A11P48066 AC091304.10-201ENST00000641554 121 ntBASIC1.78□□□□□ -2.12
SLC6A11P48066 Y_RNA.342-201ENST00000365352 113 ntBASIC1.77□□□□□ -2.13
SLC6A11P48066 RNU6-1065P-201ENST00000384513 106 ntBASIC1.77□□□□□ -2.13
SLC6A11P48066 RNU6-205P-201ENST00000390858 107 ntBASIC1.77□□□□□ -2.13
SLC6A11P48066 RNU6-644P-201ENST00000391155 98 ntBASIC1.77□□□□□ -2.13
SLC6A11P48066 MIR1302-7-201ENST00000408841 72 ntBASIC1.77□□□□□ -2.13
SLC6A11P48066 AC244023.1-201ENST00000426884 112 ntBASIC1.77□□□□□ -2.13
SLC6A11P48066 AC004941.2-201ENST00000427009 228 ntBASIC1.77□□□□□ -2.13
SLC6A11P48066 RPS29P28-201ENST00000446439 141 ntBASIC1.77□□□□□ -2.13
SLC6A11P48066 RN7SL274P-201ENST00000492268 272 ntBASIC1.77□□□□□ -2.13
SLC6A11P48066 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.77□□□□□ -2.13
SLC6A11P48066 AP000753.3-201ENST00000604083 169 ntBASIC1.77□□□□□ -2.13
SLC6A11P48066 AC242498.1-201ENST00000604134 111 ntBASIC1.77□□□□□ -2.13
SLC6A11P48066 MIR376B-201ENST00000614515 100 ntBASIC1.77□□□□□ -2.13
SLC6A11P48066 AL662814.1-201ENST00000617364 121 ntBASIC1.77□□□□□ -2.13
SLC6A11P48066 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.77□□□□□ -2.13
SLC6A11P48066 MIR103A2-201ENST00000362154 78 ntBASIC1.76□□□□□ -2.13
SLC6A11P48066 MIR302D-201ENST00000362275 68 ntBASIC1.76□□□□□ -2.13
SLC6A11P48066 SNORD114-10-201ENST00000363409 72 ntBASIC1.76□□□□□ -2.13
SLC6A11P48066 RNY1P13-201ENST00000365030 105 ntBASIC1.76□□□□□ -2.13
SLC6A11P48066 Y_RNA.466-201ENST00000384294 113 ntBASIC1.76□□□□□ -2.13
SLC6A11P48066 MIR34C-201ENST00000384831 77 ntBASIC1.76□□□□□ -2.13
SLC6A11P48066 MIR588-201ENST00000384900 83 ntBASIC1.76□□□□□ -2.13
SLC6A11P48066 RNU6-1321P-201ENST00000390905 107 ntBASIC1.76□□□□□ -2.13
SLC6A11P48066 snoU13.25-201ENST00000458945 104 ntBASIC1.76□□□□□ -2.13
SLC6A11P48066 UBL5P1-201ENST00000507979 193 ntBASIC1.76□□□□□ -2.13
SLC6A11P48066 MIR502-201ENST00000606349 86 ntBASIC1.76□□□□□ -2.13
SLC6A11P48066 Y_RNA.247-201ENST00000364500 92 ntBASIC1.75□□□□□ -2.13
SLC6A11P48066 MIR499A-201ENST00000384903 122 ntBASIC1.75□□□□□ -2.13
SLC6A11P48066 RNU6-321P-201ENST00000410912 106 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 216.5 ms