Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 RNU6-1053P-201ENST00000515930 101 ntBASIC1.21□□□□□ -2.22
EPHA3P29320 SNORD33.1-201ENST00000516213 88 ntBASIC1.21□□□□□ -2.22
EPHA3P29320 MIR4781-201ENST00000585250 76 ntBASIC1.21□□□□□ -2.22
EPHA3P29320 AC106800.4-201ENST00000614905 153 ntBASIC1.21□□□□□ -2.22
EPHA3P29320 AL662814.1-201ENST00000617364 121 ntBASIC1.21□□□□□ -2.22
EPHA3P29320 Y_RNA.213-201ENST00000364178 111 ntBASIC1.2□□□□□ -2.22
EPHA3P29320 MIR563-201ENST00000385080 79 ntBASIC1.2□□□□□ -2.22
EPHA3P29320 MIR1270-201ENST00000459320 83 ntBASIC1.2□□□□□ -2.22
EPHA3P29320 RNU6-313P-201ENST00000516317 112 ntBASIC1.2□□□□□ -2.22
EPHA3P29320 RNU6-479P-201ENST00000516348 105 ntBASIC1.2□□□□□ -2.22
EPHA3P29320 RNU7-6P-201ENST00000516845 62 ntBASIC1.2□□□□□ -2.22
EPHA3P29320 AC141846.1-201ENST00000568348 142 ntBASIC1.2□□□□□ -2.22
EPHA3P29320 Y_RNA.299-201ENST00000364973 94 ntBASIC1.19□□□□□ -2.22
EPHA3P29320 MIR759-201ENST00000390224 91 ntBASIC1.19□□□□□ -2.22
EPHA3P29320 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.19□□□□□ -2.22
EPHA3P29320 SNORD111-201ENST00000408139 94 ntBASIC1.19□□□□□ -2.22
EPHA3P29320 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.19□□□□□ -2.22
EPHA3P29320 RNU2-51P-201ENST00000410708 197 ntBASIC1.19□□□□□ -2.22
EPHA3P29320 RNU6-1086P-201ENST00000410930 100 ntBASIC1.19□□□□□ -2.22
EPHA3P29320 SNORD83.1-201ENST00000411362 77 ntBASIC1.19□□□□□ -2.22
EPHA3P29320 AC015818.7-201ENST00000428754 109 ntBASIC1.19□□□□□ -2.22
EPHA3P29320 AC087499.7-201ENST00000441958 109 ntBASIC1.19□□□□□ -2.22
EPHA3P29320 RNU7-79P-201ENST00000516082 62 ntBASIC1.19□□□□□ -2.22
EPHA3P29320 AC012676.2-201ENST00000619258 186 ntBASIC1.19□□□□□ -2.22
EPHA3P29320 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
EPHA3P29320 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
EPHA3P29320 MIR30D-201ENST00000362283 70 ntBASIC1.18□□□□□ -2.22
EPHA3P29320 SNORA25.8-201ENST00000364831 128 ntBASIC1.18□□□□□ -2.22
EPHA3P29320 SNORA40.6-201ENST00000391153 128 ntBASIC1.18□□□□□ -2.22
EPHA3P29320 RNU7-40P-201ENST00000516397 64 ntBASIC1.18□□□□□ -2.22
EPHA3P29320 RNU7-35P-201ENST00000517174 62 ntBASIC1.18□□□□□ -2.22
EPHA3P29320 MIR4421-201ENST00000578133 69 ntBASIC1.18□□□□□ -2.22
EPHA3P29320 MIR3163-201ENST00000581592 73 ntBASIC1.18□□□□□ -2.22
EPHA3P29320 MIR3660-201ENST00000584845 100 ntBASIC1.18□□□□□ -2.22
EPHA3P29320 AL359821.1-201ENST00000605519 182 ntBASIC1.18□□□□□ -2.22
EPHA3P29320 U6.95-201ENST00000636931 70 ntBASIC1.18□□□□□ -2.22
EPHA3P29320 MIR337-201ENST00000362281 93 ntBASIC1.17□□□□□ -2.22
EPHA3P29320 RNY1P10-201ENST00000363268 113 ntBASIC1.17□□□□□ -2.22
EPHA3P29320 SNORA7.1-201ENST00000363750 139 ntBASIC1.17□□□□□ -2.22
EPHA3P29320 RNA5SP205-201ENST00000364653 136 ntBASIC1.17□□□□□ -2.22
EPHA3P29320 RNY1P13-201ENST00000365030 105 ntBASIC1.17□□□□□ -2.22
EPHA3P29320 RNU6-994P-201ENST00000410507 111 ntBASIC1.17□□□□□ -2.22
EPHA3P29320 AL359881.1-201ENST00000602916 267 ntBASIC1.17□□□□□ -2.22
EPHA3P29320 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.17□□□□□ -2.22
EPHA3P29320 AL589743.1-201ENST00000551932 2712 ntBASIC1.17□□□□□ -2.22
EPHA3P29320 RNU6-934P-201ENST00000365154 107 ntBASIC1.16□□□□□ -2.22
EPHA3P29320 Y_RNA.353-201ENST00000365440 108 ntBASIC1.16□□□□□ -2.22
EPHA3P29320 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.16□□□□□ -2.22
EPHA3P29320 MIR1285-1-201ENST00000408593 84 ntBASIC1.16□□□□□ -2.22
EPHA3P29320 Y_RNA.649-201ENST00000459077 103 ntBASIC1.16□□□□□ -2.22
EPHA3P29320 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.16□□□□□ -2.22
EPHA3P29320 RNA5SP404-201ENST00000517118 132 ntBASIC1.16□□□□□ -2.22
EPHA3P29320 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
EPHA3P29320 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
EPHA3P29320 Y_RNA.563-201ENST00000384707 108 ntBASIC1.15□□□□□ -2.23
EPHA3P29320 MIR19B1-201ENST00000384829 87 ntBASIC1.15□□□□□ -2.23
EPHA3P29320 MIR548A1-201ENST00000385041 97 ntBASIC1.15□□□□□ -2.23
EPHA3P29320 MIR548A3-201ENST00000385297 97 ntBASIC1.15□□□□□ -2.23
EPHA3P29320 SNORD77B-201ENST00000391112 67 ntBASIC1.15□□□□□ -2.23
EPHA3P29320 SNORD124-201ENST00000459577 104 ntBASIC1.15□□□□□ -2.23
EPHA3P29320 SNORD67.1-201ENST00000516618 108 ntBASIC1.15□□□□□ -2.23
EPHA3P29320 MTND5P34-201ENST00000568888 325 ntBASIC1.15□□□□□ -2.23
EPHA3P29320 SNORA4-201ENST00000584302 138 ntBASIC1.15□□□□□ -2.23
EPHA3P29320 AC087741.2-201ENST00000619415 172 ntBASIC1.15□□□□□ -2.23
EPHA3P29320 MT-TF-201ENST00000387314 71 ntBASIC1.14□□□□□ -2.23
EPHA3P29320 RNU6-321P-201ENST00000410912 106 ntBASIC1.14□□□□□ -2.23
EPHA3P29320 RPL39P25-201ENST00000449384 154 ntBASIC1.14□□□□□ -2.23
EPHA3P29320 MIR18B-201ENST00000454574 71 ntBASIC1.14□□□□□ -2.23
EPHA3P29320 Y_RNA.676-201ENST00000516393 96 ntBASIC1.14□□□□□ -2.23
EPHA3P29320 MIR4771-2-201ENST00000577758 74 ntBASIC1.14□□□□□ -2.23
EPHA3P29320 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.14□□□□□ -2.23
EPHA3P29320 MIR4771-1-201ENST00000582617 74 ntBASIC1.14□□□□□ -2.23
EPHA3P29320 AL670379.3-201ENST00000605040 251 ntBASIC1.14□□□□□ -2.23
EPHA3P29320 AL157834.3-201ENST00000615543 103 ntBASIC1.14□□□□□ -2.23
EPHA3P29320 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
EPHA3P29320 AC023934.1-201ENST00000574529 2389 ntBASIC1.13□□□□□ -2.23
EPHA3P29320 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
EPHA3P29320 RNU6-949P-201ENST00000384040 107 ntBASIC1.13□□□□□ -2.23
EPHA3P29320 RNU6-616P-201ENST00000384353 107 ntBASIC1.13□□□□□ -2.23
EPHA3P29320 RNU6-1081P-201ENST00000384537 107 ntBASIC1.13□□□□□ -2.23
EPHA3P29320 MIR548D2-201ENST00000384955 97 ntBASIC1.13□□□□□ -2.23
EPHA3P29320 MIR618-201ENST00000385287 98 ntBASIC1.13□□□□□ -2.23
EPHA3P29320 RPS29P28-201ENST00000446439 141 ntBASIC1.13□□□□□ -2.23
EPHA3P29320 TRMT112P2-201ENST00000512910 132 ntBASIC1.13□□□□□ -2.23
EPHA3P29320 Y_RNA.773-201ENST00000607168 90 ntBASIC1.13□□□□□ -2.23
EPHA3P29320 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
EPHA3P29320 RNY4P6-201ENST00000363667 96 ntBASIC1.12□□□□□ -2.23
EPHA3P29320 Y_RNA.344-201ENST00000365381 112 ntBASIC1.12□□□□□ -2.23
EPHA3P29320 U8.15-201ENST00000390947 134 ntBASIC1.12□□□□□ -2.23
EPHA3P29320 MIR548I2-201ENST00000408348 149 ntBASIC1.12□□□□□ -2.23
EPHA3P29320 RPS26P5-201ENST00000418544 335 ntBASIC1.12□□□□□ -2.23
EPHA3P29320 RNU7-137P-201ENST00000516788 62 ntBASIC1.12□□□□□ -2.23
EPHA3P29320 FAM71BP1-201ENST00000604431 523 ntBASIC1.12□□□□□ -2.23
EPHA3P29320 AC105081.1-201ENST00000617727 106 ntBASIC1.12□□□□□ -2.23
EPHA3P29320 AL353770.2-201ENST00000620024 78 ntBASIC1.12□□□□□ -2.23
EPHA3P29320 Y_RNA.4-201ENST00000362333 112 ntBASIC1.11□□□□□ -2.23
EPHA3P29320 Y_RNA.327-201ENST00000365201 102 ntBASIC1.11□□□□□ -2.23
EPHA3P29320 MIR942-201ENST00000401111 86 ntBASIC1.11□□□□□ -2.23
EPHA3P29320 SNORD93-201ENST00000408813 74 ntBASIC1.11□□□□□ -2.23
EPHA3P29320 AC067940.1-201ENST00000458411 300 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 205 ms