Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 RNU1-119P-201ENST00000391122 165 ntBASIC0.68□□□□□ -2.3
PTPN3P26045 SNORA75.5-201ENST00000391291 81 ntBASIC0.68□□□□□ -2.3
PTPN3P26045 MIR548J-201ENST00000408833 112 ntBASIC0.68□□□□□ -2.3
PTPN3P26045 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.68□□□□□ -2.3
PTPN3P26045 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.68□□□□□ -2.3
PTPN3P26045 AC133485.1-201ENST00000567176 124 ntBASIC0.68□□□□□ -2.3
PTPN3P26045 AC138907.6-201ENST00000568401 126 ntBASIC0.68□□□□□ -2.3
PTPN3P26045 MIR6515-201ENST00000619843 57 ntBASIC0.68□□□□□ -2.3
PTPN3P26045 SNORA22.1-201ENST00000362701 134 ntBASIC0.67□□□□□ -2.3
PTPN3P26045 Y_RNA.251-201ENST00000364551 99 ntBASIC0.67□□□□□ -2.3
PTPN3P26045 Y_RNA.398-201ENST00000383952 99 ntBASIC0.67□□□□□ -2.3
PTPN3P26045 SNORD116-18-201ENST00000383961 92 ntBASIC0.67□□□□□ -2.3
PTPN3P26045 Y_RNA.466-201ENST00000384294 113 ntBASIC0.67□□□□□ -2.3
PTPN3P26045 RNU6-1237P-201ENST00000384777 107 ntBASIC0.67□□□□□ -2.3
PTPN3P26045 MIR520F-201ENST00000384824 87 ntBASIC0.67□□□□□ -2.3
PTPN3P26045 MIR573-201ENST00000384964 99 ntBASIC0.67□□□□□ -2.3
PTPN3P26045 Y_RNA.686-201ENST00000516548 134 ntBASIC0.67□□□□□ -2.3
PTPN3P26045 RNU6-1258P-201ENST00000516911 111 ntBASIC0.67□□□□□ -2.3
PTPN3P26045 MTND5P41-201ENST00000517498 206 ntBASIC0.67□□□□□ -2.3
PTPN3P26045 MIR3144-201ENST00000579460 79 ntBASIC0.67□□□□□ -2.3
PTPN3P26045 AC020891.4-201ENST00000605745 93 ntBASIC0.67□□□□□ -2.3
PTPN3P26045 AC022709.1-201ENST00000615967 87 ntBASIC0.67□□□□□ -2.3
PTPN3P26045 AL662814.1-201ENST00000617364 121 ntBASIC0.67□□□□□ -2.3
PTPN3P26045 AC021753.1-201ENST00000635724 168 ntBASIC0.67□□□□□ -2.3
PTPN3P26045 RNU6-349P-201ENST00000362402 107 ntBASIC0.66□□□□□ -2.3
PTPN3P26045 RNU6-309P-201ENST00000364573 106 ntBASIC0.66□□□□□ -2.3
PTPN3P26045 RNY1P6-201ENST00000384193 109 ntBASIC0.66□□□□□ -2.3
PTPN3P26045 MIR508-201ENST00000384857 115 ntBASIC0.66□□□□□ -2.3
PTPN3P26045 MIR938-201ENST00000401216 83 ntBASIC0.66□□□□□ -2.3
PTPN3P26045 RNU7-56P-201ENST00000458744 62 ntBASIC0.66□□□□□ -2.3
PTPN3P26045 RNU7-185P-201ENST00000459215 60 ntBASIC0.66□□□□□ -2.3
PTPN3P26045 AC112693.2-201ENST00000556538 232 ntBASIC0.66□□□□□ -2.3
PTPN3P26045 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
PTPN3P26045 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.3
PTPN3P26045 RNU4-45P-201ENST00000365469 141 ntBASIC0.65□□□□□ -2.31
PTPN3P26045 RNU6-449P-201ENST00000383914 107 ntBASIC0.65□□□□□ -2.31
PTPN3P26045 MIR520H-201ENST00000385126 88 ntBASIC0.65□□□□□ -2.31
PTPN3P26045 MIR125B2-201ENST00000385128 89 ntBASIC0.65□□□□□ -2.31
PTPN3P26045 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
PTPN3P26045 Y_RNA.580-201ENST00000391004 95 ntBASIC0.65□□□□□ -2.31
PTPN3P26045 Y_RNA.584-201ENST00000391090 114 ntBASIC0.65□□□□□ -2.31
PTPN3P26045 MIR1257-201ENST00000408490 117 ntBASIC0.65□□□□□ -2.31
PTPN3P26045 RNA5SP222-201ENST00000411039 105 ntBASIC0.65□□□□□ -2.31
PTPN3P26045 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.65□□□□□ -2.31
PTPN3P26045 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.65□□□□□ -2.31
PTPN3P26045 AC004812.1-201ENST00000540773 146 ntBASIC0.65□□□□□ -2.31
PTPN3P26045 SNORD92-201ENST00000585078 85 ntBASIC0.65□□□□□ -2.31
PTPN3P26045 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.65□□□□□ -2.31
PTPN3P26045 AC098479.1-201ENST00000609225 154 ntBASIC0.65□□□□□ -2.31
PTPN3P26045 AC011603.4-201ENST00000611325 277 ntBASIC0.65□□□□□ -2.31
PTPN3P26045 Y_RNA.778-201ENST00000620203 90 ntBASIC0.65□□□□□ -2.31
PTPN3P26045 Y_RNA.171-201ENST00000363760 102 ntBASIC0.64□□□□□ -2.31
PTPN3P26045 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
PTPN3P26045 MIR598-201ENST00000384868 97 ntBASIC0.64□□□□□ -2.31
PTPN3P26045 RNU6-460P-201ENST00000391158 108 ntBASIC0.64□□□□□ -2.31
PTPN3P26045 RNU7-197P-201ENST00000458836 62 ntBASIC0.64□□□□□ -2.31
PTPN3P26045 Y_RNA.651-201ENST00000459380 103 ntBASIC0.64□□□□□ -2.31
PTPN3P26045 RNA5SP272-201ENST00000516095 111 ntBASIC0.64□□□□□ -2.31
PTPN3P26045 MIR3668-201ENST00000582138 75 ntBASIC0.64□□□□□ -2.31
PTPN3P26045 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.64□□□□□ -2.31
PTPN3P26045 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
PTPN3P26045 Y_RNA.555-201ENST00000384673 110 ntBASIC0.63□□□□□ -2.31
PTPN3P26045 MT-TR-201ENST00000387439 65 ntBASIC0.63□□□□□ -2.31
PTPN3P26045 RNU6-240P-201ENST00000516098 97 ntBASIC0.63□□□□□ -2.31
PTPN3P26045 MIR5000-201ENST00000577717 103 ntBASIC0.63□□□□□ -2.31
PTPN3P26045 Y_RNA.757-201ENST00000578934 114 ntBASIC0.63□□□□□ -2.31
PTPN3P26045 Y_RNA.180-201ENST00000363867 113 ntBASIC0.62□□□□□ -2.31
PTPN3P26045 RNU6-690P-201ENST00000365242 106 ntBASIC0.62□□□□□ -2.31
PTPN3P26045 SNORA36.2-201ENST00000384004 127 ntBASIC0.62□□□□□ -2.31
PTPN3P26045 RNU6-342P-201ENST00000384521 104 ntBASIC0.62□□□□□ -2.31
PTPN3P26045 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.62□□□□□ -2.31
PTPN3P26045 RNA5SP237-201ENST00000410414 113 ntBASIC0.62□□□□□ -2.31
PTPN3P26045 RNA5SP144-201ENST00000410846 116 ntBASIC0.62□□□□□ -2.31
PTPN3P26045 AL512326.2-201ENST00000426359 151 ntBASIC0.62□□□□□ -2.31
PTPN3P26045 SNORA25.12-201ENST00000516202 82 ntBASIC0.62□□□□□ -2.31
PTPN3P26045 RNA5SP121-201ENST00000516537 101 ntBASIC0.62□□□□□ -2.31
PTPN3P26045 Y_RNA.690-201ENST00000516603 95 ntBASIC0.62□□□□□ -2.31
PTPN3P26045 AC090897.1-201ENST00000580909 226 ntBASIC0.62□□□□□ -2.31
PTPN3P26045 Y_RNA.170-201ENST00000363746 110 ntBASIC0.61□□□□□ -2.31
PTPN3P26045 SNORD18B-201ENST00000365659 72 ntBASIC0.61□□□□□ -2.31
PTPN3P26045 RNY1P8-201ENST00000383970 114 ntBASIC0.61□□□□□ -2.31
PTPN3P26045 Y_RNA.470-201ENST00000384307 117 ntBASIC0.61□□□□□ -2.31
PTPN3P26045 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.61□□□□□ -2.31
PTPN3P26045 RNU6-1086P-201ENST00000410930 100 ntBASIC0.61□□□□□ -2.31
PTPN3P26045 MTATP6P21-201ENST00000440681 189 ntBASIC0.61□□□□□ -2.31
PTPN3P26045 RNU5E-3P-201ENST00000515913 68 ntBASIC0.61□□□□□ -2.31
PTPN3P26045 RNU2-35P-201ENST00000516446 142 ntBASIC0.61□□□□□ -2.31
PTPN3P26045 RNU6-255P-201ENST00000516957 105 ntBASIC0.61□□□□□ -2.31
PTPN3P26045 AC018659.1-201ENST00000551083 169 ntBASIC0.61□□□□□ -2.31
PTPN3P26045 AC141846.1-201ENST00000568348 142 ntBASIC0.61□□□□□ -2.31
PTPN3P26045 AC108081.1-201ENST00000604358 221 ntBASIC0.61□□□□□ -2.31
PTPN3P26045 Y_RNA.120-201ENST00000363304 110 ntBASIC0.6□□□□□ -2.31
PTPN3P26045 Y_RNA.215-201ENST00000364204 112 ntBASIC0.6□□□□□ -2.31
PTPN3P26045 Y_RNA.400-201ENST00000383963 111 ntBASIC0.6□□□□□ -2.31
PTPN3P26045 RNU6-949P-201ENST00000384040 107 ntBASIC0.6□□□□□ -2.31
PTPN3P26045 SNORA18-201ENST00000384416 132 ntBASIC0.6□□□□□ -2.31
PTPN3P26045 AL603914.1-201ENST00000401964 204 ntBASIC0.6□□□□□ -2.31
PTPN3P26045 SNORD100-201ENST00000408573 76 ntBASIC0.6□□□□□ -2.31
PTPN3P26045 RNU6-447P-201ENST00000410293 104 ntBASIC0.6□□□□□ -2.31
PTPN3P26045 RNU6-1118P-201ENST00000410382 104 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 193.7 ms