Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 RNU4-70P-201ENST00000384579 139 ntBASIC0.42□□□□□ -2.34
CAPN3P20807 Y_RNA.562-201ENST00000384695 113 ntBASIC0.42□□□□□ -2.34
CAPN3P20807 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.42□□□□□ -2.34
CAPN3P20807 AC011921.3-201ENST00000605540 361 ntBASIC0.42□□□□□ -2.34
CAPN3P20807 RNU2-4P-201ENST00000606190 192 ntBASIC0.42□□□□□ -2.34
CAPN3P20807 RNU6-1099P-201ENST00000363533 107 ntBASIC0.41□□□□□ -2.34
CAPN3P20807 SNORD27-201ENST00000363981 72 ntBASIC0.41□□□□□ -2.34
CAPN3P20807 RNU6-978P-201ENST00000364371 103 ntBASIC0.41□□□□□ -2.34
CAPN3P20807 RNU6-493P-201ENST00000391321 108 ntBASIC0.41□□□□□ -2.34
CAPN3P20807 RNU5E-9P-201ENST00000411164 104 ntBASIC0.41□□□□□ -2.34
CAPN3P20807 SNORA68.3-201ENST00000515906 83 ntBASIC0.41□□□□□ -2.34
CAPN3P20807 MIR6841-201ENST00000637129 72 ntBASIC0.41□□□□□ -2.34
CAPN3P20807 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
CAPN3P20807 MIRLET7D-201ENST00000362263 87 ntBASIC0.4□□□□□ -2.35
CAPN3P20807 MIR518A1-201ENST00000385068 85 ntBASIC0.4□□□□□ -2.35
CAPN3P20807 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.4□□□□□ -2.35
CAPN3P20807 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.4□□□□□ -2.35
CAPN3P20807 RNU6-135P-201ENST00000516769 101 ntBASIC0.4□□□□□ -2.35
CAPN3P20807 RNA5SP94-201ENST00000516917 108 ntBASIC0.4□□□□□ -2.35
CAPN3P20807 MIR4514-201ENST00000581410 57 ntBASIC0.4□□□□□ -2.35
CAPN3P20807 Y_RNA.65-201ENST00000362846 100 ntBASIC0.39□□□□□ -2.35
CAPN3P20807 Y_RNA.182-201ENST00000363880 111 ntBASIC0.39□□□□□ -2.35
CAPN3P20807 RNU6-694P-201ENST00000364071 147 ntBASIC0.39□□□□□ -2.35
CAPN3P20807 Y_RNA.571-201ENST00000384753 98 ntBASIC0.39□□□□□ -2.35
CAPN3P20807 MTCYBP9-201ENST00000431021 303 ntBASIC0.39□□□□□ -2.35
CAPN3P20807 AC141846.1-201ENST00000568348 142 ntBASIC0.39□□□□□ -2.35
CAPN3P20807 MIR3678-201ENST00000578455 94 ntBASIC0.39□□□□□ -2.35
CAPN3P20807 Y_RNA.20-201ENST00000362479 113 ntBASIC0.38□□□□□ -2.35
CAPN3P20807 Y_RNA.42-201ENST00000362660 108 ntBASIC0.38□□□□□ -2.35
CAPN3P20807 RNU6-403P-201ENST00000363163 104 ntBASIC0.38□□□□□ -2.35
CAPN3P20807 Y_RNA.174-201ENST00000363781 105 ntBASIC0.38□□□□□ -2.35
CAPN3P20807 RNU6-1327P-201ENST00000365302 105 ntBASIC0.38□□□□□ -2.35
CAPN3P20807 Y_RNA.350-201ENST00000365409 98 ntBASIC0.38□□□□□ -2.35
CAPN3P20807 RNU6-863P-201ENST00000515989 104 ntBASIC0.38□□□□□ -2.35
CAPN3P20807 RNU4-71P-201ENST00000516258 113 ntBASIC0.38□□□□□ -2.35
CAPN3P20807 RNU6-1149P-201ENST00000516810 97 ntBASIC0.38□□□□□ -2.35
CAPN3P20807 RNU6-765P-201ENST00000516916 99 ntBASIC0.38□□□□□ -2.35
CAPN3P20807 AC022523.2-201ENST00000561045 150 ntBASIC0.38□□□□□ -2.35
CAPN3P20807 RNU6-275P-201ENST00000364910 107 ntBASIC0.37□□□□□ -2.35
CAPN3P20807 MIR329-2-201ENST00000385029 84 ntBASIC0.37□□□□□ -2.35
CAPN3P20807 RNA5SP134-201ENST00000516492 96 ntBASIC0.37□□□□□ -2.35
CAPN3P20807 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.37□□□□□ -2.35
CAPN3P20807 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.37□□□□□ -2.35
CAPN3P20807 RNA5SP517-201ENST00000364724 117 ntBASIC0.36□□□□□ -2.35
CAPN3P20807 RNU6-949P-201ENST00000384040 107 ntBASIC0.36□□□□□ -2.35
CAPN3P20807 Y_RNA.567-201ENST00000384736 106 ntBASIC0.36□□□□□ -2.35
CAPN3P20807 RNU6-327P-201ENST00000516270 127 ntBASIC0.36□□□□□ -2.35
CAPN3P20807 RNY3P16-201ENST00000516338 101 ntBASIC0.36□□□□□ -2.35
CAPN3P20807 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
CAPN3P20807 MIR6082-201ENST00000613604 109 ntBASIC0.36□□□□□ -2.35
CAPN3P20807 MIR8066-201ENST00000617280 78 ntBASIC0.36□□□□□ -2.35
CAPN3P20807 RNU6-923P-201ENST00000364753 107 ntBASIC0.35□□□□□ -2.35
CAPN3P20807 RNY1P6-201ENST00000384193 109 ntBASIC0.35□□□□□ -2.35
CAPN3P20807 Y_RNA.521-201ENST00000384560 114 ntBASIC0.35□□□□□ -2.35
CAPN3P20807 SNORD58.1-201ENST00000391313 66 ntBASIC0.35□□□□□ -2.35
CAPN3P20807 Y_RNA.626-201ENST00000411288 95 ntBASIC0.35□□□□□ -2.35
CAPN3P20807 MTND2P23-201ENST00000422990 651 ntBASIC0.35□□□□□ -2.35
CAPN3P20807 SCARNA15-202ENST00000516881 127 ntBASIC0.35□□□□□ -2.35
CAPN3P20807 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.35□□□□□ -2.35
CAPN3P20807 SNORA18-201ENST00000384416 132 ntBASIC0.34□□□□□ -2.36
CAPN3P20807 SNORA72.6-201ENST00000384520 129 ntBASIC0.34□□□□□ -2.36
CAPN3P20807 U8.15-201ENST00000390947 134 ntBASIC0.34□□□□□ -2.36
CAPN3P20807 MIR1265-201ENST00000408444 86 ntBASIC0.34□□□□□ -2.36
CAPN3P20807 RNU6-1086P-201ENST00000410930 100 ntBASIC0.34□□□□□ -2.36
CAPN3P20807 AL512326.2-201ENST00000426359 151 ntBASIC0.34□□□□□ -2.36
CAPN3P20807 Y_RNA.13-201ENST00000362403 112 ntBASIC0.33□□□□□ -2.36
CAPN3P20807 RNU4-67P-201ENST00000364569 141 ntBASIC0.33□□□□□ -2.36
CAPN3P20807 RNU6-597P-201ENST00000365620 102 ntBASIC0.33□□□□□ -2.36
CAPN3P20807 SNORA8.2-201ENST00000384372 139 ntBASIC0.33□□□□□ -2.36
CAPN3P20807 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.33□□□□□ -2.36
CAPN3P20807 AC133485.4-201ENST00000561835 220 ntBASIC0.33□□□□□ -2.36
CAPN3P20807 Y_RNA.75-201ENST00000362927 97 ntBASIC0.32□□□□□ -2.36
CAPN3P20807 RNU6-1229P-201ENST00000364295 107 ntBASIC0.32□□□□□ -2.36
CAPN3P20807 RNA5SP299-201ENST00000391203 116 ntBASIC0.32□□□□□ -2.36
CAPN3P20807 AL022718.1-201ENST00000412004 84 ntBASIC0.32□□□□□ -2.36
CAPN3P20807 Y_RNA.668-201ENST00000516233 93 ntBASIC0.32□□□□□ -2.36
CAPN3P20807 RNU6-1045P-201ENST00000516321 107 ntBASIC0.32□□□□□ -2.36
CAPN3P20807 AC062037.2-201ENST00000610137 73 ntBASIC0.32□□□□□ -2.36
CAPN3P20807 SNORD118-201ENST00000363593 134 ntBASIC0.31□□□□□ -2.36
CAPN3P20807 RNU4-16P-201ENST00000364737 141 ntBASIC0.31□□□□□ -2.36
CAPN3P20807 MIR4491-201ENST00000581087 68 ntBASIC0.31□□□□□ -2.36
CAPN3P20807 Y_RNA.133-201ENST00000363428 110 ntBASIC0.3□□□□□ -2.36
CAPN3P20807 Y_RNA.477-201ENST00000384352 108 ntBASIC0.3□□□□□ -2.36
CAPN3P20807 MIR4308-201ENST00000580634 81 ntBASIC0.3□□□□□ -2.36
CAPN3P20807 U4.1-201ENST00000620349 87 ntBASIC0.3□□□□□ -2.36
CAPN3P20807 MIR6759-201ENST00000638110 65 ntBASIC0.3□□□□□ -2.36
CAPN3P20807 MTND5P32-201ENST00000560711 1802 ntBASIC0.29□□□□□ -2.36
CAPN3P20807 SNORA20.1-201ENST00000364790 130 ntBASIC0.29□□□□□ -2.36
CAPN3P20807 Y_RNA.476-201ENST00000384347 108 ntBASIC0.29□□□□□ -2.36
CAPN3P20807 Y_RNA.588-201ENST00000391254 102 ntBASIC0.29□□□□□ -2.36
CAPN3P20807 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.29□□□□□ -2.36
CAPN3P20807 SNRPGP12-201ENST00000449481 213 ntBASIC0.29□□□□□ -2.36
CAPN3P20807 Y_RNA.697-201ENST00000516776 113 ntBASIC0.29□□□□□ -2.36
CAPN3P20807 MRPS18CP4-201ENST00000535821 231 ntBASIC0.29□□□□□ -2.36
CAPN3P20807 Y_RNA.757-201ENST00000578934 114 ntBASIC0.29□□□□□ -2.36
CAPN3P20807 MIR4431-201ENST00000579990 94 ntBASIC0.29□□□□□ -2.36
CAPN3P20807 SNORA25.18-201ENST00000607153 114 ntBASIC0.29□□□□□ -2.36
CAPN3P20807 SNORD44.1-201ENST00000363202 61 ntBASIC0.28□□□□□ -2.36
CAPN3P20807 Y_RNA.162-201ENST00000363683 102 ntBASIC0.28□□□□□ -2.36
CAPN3P20807 Y_RNA.170-201ENST00000363746 110 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 579.7 ms