Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RNA5SP24-201ENST00000516478 95 ntBASIC2.34□□□□□ -2.03
NFKB1P19838 RNU2-19P-201ENST00000517288 84 ntBASIC2.34□□□□□ -2.03
NFKB1P19838 MIR6895-201ENST00000613497 78 ntBASIC2.34□□□□□ -2.03
NFKB1P19838 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.33□□□□□ -2.04
NFKB1P19838 Y_RNA.94-201ENST00000363068 106 ntBASIC2.33□□□□□ -2.04
NFKB1P19838 Y_RNA.168-201ENST00000363740 102 ntBASIC2.33□□□□□ -2.04
NFKB1P19838 RNA5SP259-201ENST00000365541 109 ntBASIC2.33□□□□□ -2.04
NFKB1P19838 JTBP1-201ENST00000441314 247 ntBASIC2.33□□□□□ -2.04
NFKB1P19838 AC093729.1-201ENST00000513074 128 ntBASIC2.33□□□□□ -2.04
NFKB1P19838 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.33□□□□□ -2.04
NFKB1P19838 MIR5007-201ENST00000583098 95 ntBASIC2.33□□□□□ -2.04
NFKB1P19838 AP000753.3-201ENST00000604083 169 ntBASIC2.33□□□□□ -2.04
NFKB1P19838 PRELID3BP2-201ENST00000605362 201 ntBASIC2.33□□□□□ -2.04
NFKB1P19838 MIR6766-201ENST00000622641 72 ntBASIC2.33□□□□□ -2.04
NFKB1P19838 WWP1P1-201ENST00000466609 2769 ntBASIC2.33□□□□□ -2.04
NFKB1P19838 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
NFKB1P19838 RNU6-776P-201ENST00000364403 104 ntBASIC2.32□□□□□ -2.04
NFKB1P19838 RNU6-1022P-201ENST00000365049 104 ntBASIC2.32□□□□□ -2.04
NFKB1P19838 SNORA67.4-201ENST00000384688 142 ntBASIC2.32□□□□□ -2.04
NFKB1P19838 MIR563-201ENST00000385080 79 ntBASIC2.32□□□□□ -2.04
NFKB1P19838 RNU6-519P-201ENST00000410590 108 ntBASIC2.32□□□□□ -2.04
NFKB1P19838 AC087499.7-201ENST00000441958 109 ntBASIC2.32□□□□□ -2.04
NFKB1P19838 AC008413.1-201ENST00000511864 177 ntBASIC2.32□□□□□ -2.04
NFKB1P19838 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.32□□□□□ -2.04
NFKB1P19838 AC121758.2-201ENST00000553271 193 ntBASIC2.32□□□□□ -2.04
NFKB1P19838 AC090897.1-201ENST00000580909 226 ntBASIC2.32□□□□□ -2.04
NFKB1P19838 MIR4712-201ENST00000583750 82 ntBASIC2.32□□□□□ -2.04
NFKB1P19838 MIR3192-201ENST00000584920 77 ntBASIC2.32□□□□□ -2.04
NFKB1P19838 MIR588-201ENST00000384900 83 ntBASIC2.31□□□□□ -2.04
NFKB1P19838 MIR1302-7-201ENST00000408841 72 ntBASIC2.31□□□□□ -2.04
NFKB1P19838 SNRPGP12-201ENST00000449481 213 ntBASIC2.31□□□□□ -2.04
NFKB1P19838 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.31□□□□□ -2.04
NFKB1P19838 AP000942.3-201ENST00000603702 160 ntBASIC2.31□□□□□ -2.04
NFKB1P19838 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.31□□□□□ -2.04
NFKB1P19838 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NFKB1P19838 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
NFKB1P19838 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
NFKB1P19838 SNORD115-37-201ENST00000363768 82 ntBASIC2.3□□□□□ -2.04
NFKB1P19838 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
NFKB1P19838 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.3□□□□□ -2.04
NFKB1P19838 AC055731.1-201ENST00000474387 401 ntBASIC2.3□□□□□ -2.04
NFKB1P19838 RNU6-65P-201ENST00000516332 98 ntBASIC2.3□□□□□ -2.04
NFKB1P19838 RNU6-922P-201ENST00000516753 99 ntBASIC2.3□□□□□ -2.04
NFKB1P19838 AC138749.4-201ENST00000563970 127 ntBASIC2.3□□□□□ -2.04
NFKB1P19838 AC140658.3-201ENST00000567603 271 ntBASIC2.3□□□□□ -2.04
NFKB1P19838 AL357312.1-201ENST00000603879 298 ntBASIC2.3□□□□□ -2.04
NFKB1P19838 AL096861.1-201ENST00000610899 123 ntBASIC2.3□□□□□ -2.04
NFKB1P19838 MIR8066-201ENST00000617280 78 ntBASIC2.3□□□□□ -2.04
NFKB1P19838 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
NFKB1P19838 RPS27P21-201ENST00000486977 252 ntBASIC2.29□□□□□ -2.04
NFKB1P19838 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.29□□□□□ -2.04
NFKB1P19838 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.29□□□□□ -2.04
NFKB1P19838 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
NFKB1P19838 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
NFKB1P19838 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
NFKB1P19838 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
NFKB1P19838 RNU6-250P-201ENST00000516958 103 ntBASIC2.28□□□□□ -2.04
NFKB1P19838 SNORA4-201ENST00000584302 138 ntBASIC2.28□□□□□ -2.04
NFKB1P19838 MIR7843-201ENST00000622274 79 ntBASIC2.28□□□□□ -2.04
NFKB1P19838 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
NFKB1P19838 MIRLET7G-201ENST00000362280 84 ntBASIC2.27□□□□□ -2.05
NFKB1P19838 Y_RNA.57-201ENST00000362806 113 ntBASIC2.27□□□□□ -2.05
NFKB1P19838 RNU6-396P-201ENST00000365369 105 ntBASIC2.27□□□□□ -2.05
NFKB1P19838 SNORA6-201ENST00000384033 151 ntBASIC2.27□□□□□ -2.05
NFKB1P19838 RNU6-439P-201ENST00000384188 106 ntBASIC2.27□□□□□ -2.05
NFKB1P19838 MIR221-201ENST00000385135 110 ntBASIC2.27□□□□□ -2.05
NFKB1P19838 RNA5SP212-201ENST00000391223 107 ntBASIC2.27□□□□□ -2.05
NFKB1P19838 RNU4-83P-201ENST00000410863 133 ntBASIC2.27□□□□□ -2.05
NFKB1P19838 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.27□□□□□ -2.05
NFKB1P19838 MIR5694-201ENST00000581190 76 ntBASIC2.27□□□□□ -2.05
NFKB1P19838 MIR4264-201ENST00000583520 66 ntBASIC2.27□□□□□ -2.05
NFKB1P19838 MIR6740-201ENST00000618268 113 ntBASIC2.27□□□□□ -2.05
NFKB1P19838 U6.109-201ENST00000636749 87 ntBASIC2.27□□□□□ -2.05
NFKB1P19838 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
NFKB1P19838 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
NFKB1P19838 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
NFKB1P19838 MIR30D-201ENST00000362283 70 ntBASIC2.26□□□□□ -2.05
NFKB1P19838 RNU6-571P-201ENST00000384128 107 ntBASIC2.26□□□□□ -2.05
NFKB1P19838 HSPE1P24-201ENST00000450782 238 ntBASIC2.26□□□□□ -2.05
NFKB1P19838 SNORD4B-201ENST00000459083 72 ntBASIC2.26□□□□□ -2.05
NFKB1P19838 RNU6-850P-201ENST00000516934 103 ntBASIC2.26□□□□□ -2.05
NFKB1P19838 MIR4500-201ENST00000579472 76 ntBASIC2.26□□□□□ -2.05
NFKB1P19838 AL512598.1-201ENST00000610158 273 ntBASIC2.26□□□□□ -2.05
NFKB1P19838 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.26□□□□□ -2.05
NFKB1P19838 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
NFKB1P19838 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.26□□□□□ -2.05
NFKB1P19838 MIR1236-201ENST00000408340 102 ntBASIC2.25□□□□□ -2.05
NFKB1P19838 AC015688.6-201ENST00000577737 104 ntBASIC2.25□□□□□ -2.05
NFKB1P19838 MIR6840-201ENST00000611937 71 ntBASIC2.25□□□□□ -2.05
NFKB1P19838 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
NFKB1P19838 AC008163.1-202ENST00000636004 2889 ntBASIC2.24□□□□□ -2.05
NFKB1P19838 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.24□□□□□ -2.05
NFKB1P19838 RNA5SP276-201ENST00000362580 94 ntBASIC2.24□□□□□ -2.05
NFKB1P19838 SNORA25.3-201ENST00000363205 127 ntBASIC2.24□□□□□ -2.05
NFKB1P19838 MT-TN-201ENST00000387400 73 ntBASIC2.24□□□□□ -2.05
NFKB1P19838 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
NFKB1P19838 SNORD23.1-201ENST00000408212 104 ntBASIC2.24□□□□□ -2.05
NFKB1P19838 RNU6-1165P-201ENST00000410119 107 ntBASIC2.24□□□□□ -2.05
NFKB1P19838 AC073261.1-201ENST00000429409 121 ntBASIC2.24□□□□□ -2.05
NFKB1P19838 MIR4769-201ENST00000584126 77 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 206.3 ms