Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 SNORD114-10-201ENST00000363409 72 ntBASIC1.96□□□□□ -2.1
SYPP08247 AL356379.1-201ENST00000414105 126 ntBASIC1.96□□□□□ -2.1
SYPP08247 MRPL35P3-201ENST00000421557 364 ntBASIC1.96□□□□□ -2.1
SYPP08247 AC108667.1-201ENST00000428618 249 ntBASIC1.96□□□□□ -2.1
SYPP08247 AC090255.1-201ENST00000495779 349 ntBASIC1.96□□□□□ -2.1
SYPP08247 RNA5SP445-201ENST00000515889 115 ntBASIC1.96□□□□□ -2.1
SYPP08247 PRELID3BP2-201ENST00000605362 201 ntBASIC1.96□□□□□ -2.1
SYPP08247 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
SYPP08247 Y_RNA.96-201ENST00000363092 109 ntBASIC1.95□□□□□ -2.1
SYPP08247 RNA5SP138-201ENST00000365098 114 ntBASIC1.95□□□□□ -2.1
SYPP08247 Y_RNA.448-201ENST00000384185 108 ntBASIC1.95□□□□□ -2.1
SYPP08247 Y_RNA.467-201ENST00000384297 102 ntBASIC1.95□□□□□ -2.1
SYPP08247 RNU6-1237P-201ENST00000384777 107 ntBASIC1.95□□□□□ -2.1
SYPP08247 MIR34C-201ENST00000384831 77 ntBASIC1.95□□□□□ -2.1
SYPP08247 MIR1302-7-201ENST00000408841 72 ntBASIC1.95□□□□□ -2.1
SYPP08247 AC244023.1-201ENST00000426884 112 ntBASIC1.95□□□□□ -2.1
SYPP08247 RNU6-162P-201ENST00000516228 103 ntBASIC1.95□□□□□ -2.1
SYPP08247 MIR4299-201ENST00000577899 72 ntBASIC1.95□□□□□ -2.1
SYPP08247 MIR4439-201ENST00000583746 80 ntBASIC1.95□□□□□ -2.1
SYPP08247 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.95□□□□□ -2.1
SYPP08247 AC242498.1-201ENST00000604134 111 ntBASIC1.95□□□□□ -2.1
SYPP08247 GHRLOS.1-201ENST00000610995 70 ntBASIC1.95□□□□□ -2.1
SYPP08247 MIR376B-201ENST00000614515 100 ntBASIC1.95□□□□□ -2.1
SYPP08247 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SYPP08247 MIR337-201ENST00000362281 93 ntBASIC1.94□□□□□ -2.1
SYPP08247 RNY1P13-201ENST00000365030 105 ntBASIC1.94□□□□□ -2.1
SYPP08247 RNU4-52P-201ENST00000384209 138 ntBASIC1.94□□□□□ -2.1
SYPP08247 RNU6-1321P-201ENST00000390905 107 ntBASIC1.94□□□□□ -2.1
SYPP08247 BTF3P4-201ENST00000418852 495 ntBASIC1.94□□□□□ -2.1
SYPP08247 HMGN2P38-201ENST00000423806 265 ntBASIC1.94□□□□□ -2.1
SYPP08247 HSPE1P24-201ENST00000450782 238 ntBASIC1.94□□□□□ -2.1
SYPP08247 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.94□□□□□ -2.1
SYPP08247 MIR514B-201ENST00000516774 80 ntBASIC1.94□□□□□ -2.1
SYPP08247 Y_RNA.705-201ENST00000516862 110 ntBASIC1.94□□□□□ -2.1
SYPP08247 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.94□□□□□ -2.1
SYPP08247 AC141846.1-201ENST00000568348 142 ntBASIC1.94□□□□□ -2.1
SYPP08247 MIR4448-201ENST00000584360 86 ntBASIC1.94□□□□□ -2.1
SYPP08247 snoU13.31-201ENST00000607291 104 ntBASIC1.94□□□□□ -2.1
SYPP08247 MIR378A-201ENST00000362177 66 ntBASIC1.93□□□□□ -2.1
SYPP08247 SNORD38.1-201ENST00000363863 68 ntBASIC1.93□□□□□ -2.1
SYPP08247 Y_RNA.226-201ENST00000364337 114 ntBASIC1.93□□□□□ -2.1
SYPP08247 RNU6-1134P-201ENST00000365156 101 ntBASIC1.93□□□□□ -2.1
SYPP08247 MIR450A2-201ENST00000385022 100 ntBASIC1.93□□□□□ -2.1
SYPP08247 snoU13.25-201ENST00000458945 104 ntBASIC1.93□□□□□ -2.1
SYPP08247 RNA5SP233-201ENST00000459153 113 ntBASIC1.93□□□□□ -2.1
SYPP08247 MIR4781-201ENST00000585250 76 ntBASIC1.93□□□□□ -2.1
SYPP08247 AC103810.8-201ENST00000607347 118 ntBASIC1.93□□□□□ -2.1
SYPP08247 AC105081.1-201ENST00000617727 106 ntBASIC1.93□□□□□ -2.1
SYPP08247 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
SYPP08247 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
SYPP08247 WWP1P1-201ENST00000466609 2769 ntBASIC1.92□□□□□ -2.1
SYPP08247 RNU6-865P-201ENST00000364772 107 ntBASIC1.92□□□□□ -2.1
SYPP08247 RNA5SP160-201ENST00000364866 120 ntBASIC1.92□□□□□ -2.1
SYPP08247 RNU6-447P-201ENST00000410293 104 ntBASIC1.92□□□□□ -2.1
SYPP08247 RNU6-1118P-201ENST00000410382 104 ntBASIC1.92□□□□□ -2.1
SYPP08247 RNU6-1076P-201ENST00000410397 104 ntBASIC1.92□□□□□ -2.1
SYPP08247 RNA5SP237-201ENST00000410414 113 ntBASIC1.92□□□□□ -2.1
SYPP08247 RNU6-355P-201ENST00000410427 104 ntBASIC1.92□□□□□ -2.1
SYPP08247 RNU6-791P-201ENST00000410467 104 ntBASIC1.92□□□□□ -2.1
SYPP08247 RNU6-705P-201ENST00000410601 104 ntBASIC1.92□□□□□ -2.1
SYPP08247 RNU6-1100P-201ENST00000410691 104 ntBASIC1.92□□□□□ -2.1
SYPP08247 RNU2-40P-201ENST00000410833 196 ntBASIC1.92□□□□□ -2.1
SYPP08247 RNU6-860P-201ENST00000410860 104 ntBASIC1.92□□□□□ -2.1
SYPP08247 RNU6-1217P-201ENST00000411276 104 ntBASIC1.92□□□□□ -2.1
SYPP08247 RNU6-785P-201ENST00000411324 104 ntBASIC1.92□□□□□ -2.1
SYPP08247 AC109327.2-201ENST00000448339 378 ntBASIC1.92□□□□□ -2.1
SYPP08247 SNORA25.15-201ENST00000516487 89 ntBASIC1.92□□□□□ -2.1
SYPP08247 RNU1-40P-201ENST00000516816 164 ntBASIC1.92□□□□□ -2.1
SYPP08247 RNU1-97P-201ENST00000516872 164 ntBASIC1.92□□□□□ -2.1
SYPP08247 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.92□□□□□ -2.1
SYPP08247 U6.90-201ENST00000614007 104 ntBASIC1.92□□□□□ -2.1
SYPP08247 AL662814.1-201ENST00000617364 121 ntBASIC1.92□□□□□ -2.1
SYPP08247 U6.70-201ENST00000620287 104 ntBASIC1.92□□□□□ -2.1
SYPP08247 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.92□□□□□ -2.1
SYPP08247 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SYPP08247 RNU6-972P-201ENST00000391208 107 ntBASIC1.91□□□□□ -2.1
SYPP08247 Y_RNA.593-201ENST00000410292 98 ntBASIC1.91□□□□□ -2.1
SYPP08247 RNU6-887P-201ENST00000410660 100 ntBASIC1.91□□□□□ -2.1
SYPP08247 RPS29P28-201ENST00000446439 141 ntBASIC1.91□□□□□ -2.1
SYPP08247 snoU13.2-201ENST00000459201 104 ntBASIC1.91□□□□□ -2.1
SYPP08247 AC025033.1-201ENST00000463883 194 ntBASIC1.91□□□□□ -2.1
SYPP08247 RN7SKP12-201ENST00000516275 143 ntBASIC1.91□□□□□ -2.1
SYPP08247 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.91□□□□□ -2.1
SYPP08247 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
SYPP08247 MIR302D-201ENST00000362275 68 ntBASIC1.9□□□□□ -2.11
SYPP08247 SNORA25.3-201ENST00000363205 127 ntBASIC1.9□□□□□ -2.11
SYPP08247 RNU6-1163P-201ENST00000364516 107 ntBASIC1.9□□□□□ -2.11
SYPP08247 RNA5SP190-201ENST00000365222 118 ntBASIC1.9□□□□□ -2.11
SYPP08247 RNU6-820P-201ENST00000384273 107 ntBASIC1.9□□□□□ -2.11
SYPP08247 RNU6-813P-201ENST00000384691 107 ntBASIC1.9□□□□□ -2.11
SYPP08247 MIR1287-201ENST00000408492 90 ntBASIC1.9□□□□□ -2.11
SYPP08247 RNU7-48P-201ENST00000458875 63 ntBASIC1.9□□□□□ -2.11
SYPP08247 MIR5002-201ENST00000584713 97 ntBASIC1.9□□□□□ -2.11
SYPP08247 AL359851.1-201ENST00000569460 4997 ntBASIC1.9□□□□□ -2.11
SYPP08247 Y_RNA.17-201ENST00000362433 111 ntBASIC1.89□□□□□ -2.11
SYPP08247 AP003716.2-201ENST00000528260 108 ntBASIC1.89□□□□□ -2.11
SYPP08247 SEPT14P17-201ENST00000617978 177 ntBASIC1.89□□□□□ -2.11
SYPP08247 MIR8063-201ENST00000621930 81 ntBASIC1.89□□□□□ -2.11
SYPP08247 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.89□□□□□ -2.11
SYPP08247 Y_RNA.98-201ENST00000363109 102 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms