Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 AL442128.1-201ENST00000615151 90 ntBASIC1.5□□□□□ -2.17
SPDEFO95238 AL662814.1-201ENST00000617364 121 ntBASIC1.5□□□□□ -2.17
SPDEFO95238 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.5□□□□□ -2.17
SPDEFO95238 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.5□□□□□ -2.17
SPDEFO95238 RNU6-1131P-201ENST00000364955 107 ntBASIC1.49□□□□□ -2.17
SPDEFO95238 MT-TN-201ENST00000387400 73 ntBASIC1.49□□□□□ -2.17
SPDEFO95238 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.49□□□□□ -2.17
SPDEFO95238 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.49□□□□□ -2.17
SPDEFO95238 MIR2115-201ENST00000516657 100 ntBASIC1.49□□□□□ -2.17
SPDEFO95238 MIR3664-201ENST00000579074 99 ntBASIC1.49□□□□□ -2.17
SPDEFO95238 MIR3937-201ENST00000580135 106 ntBASIC1.49□□□□□ -2.17
SPDEFO95238 MIR4264-201ENST00000583520 66 ntBASIC1.49□□□□□ -2.17
SPDEFO95238 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.49□□□□□ -2.17
SPDEFO95238 AC012531.4-201ENST00000616509 177 ntBASIC1.49□□□□□ -2.17
SPDEFO95238 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.49□□□□□ -2.17
SPDEFO95238 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SPDEFO95238 RNU6-170P-201ENST00000362832 104 ntBASIC1.48□□□□□ -2.17
SPDEFO95238 SNORD45B-201ENST00000364617 72 ntBASIC1.48□□□□□ -2.17
SPDEFO95238 Y_RNA.448-201ENST00000384185 108 ntBASIC1.48□□□□□ -2.17
SPDEFO95238 RNU6-49P-201ENST00000384256 107 ntBASIC1.48□□□□□ -2.17
SPDEFO95238 MIR588-201ENST00000384900 83 ntBASIC1.48□□□□□ -2.17
SPDEFO95238 MIR563-201ENST00000385080 79 ntBASIC1.48□□□□□ -2.17
SPDEFO95238 MIR1185-1-201ENST00000408598 86 ntBASIC1.48□□□□□ -2.17
SPDEFO95238 AC004941.2-201ENST00000427009 228 ntBASIC1.48□□□□□ -2.17
SPDEFO95238 UBL5P1-201ENST00000507979 193 ntBASIC1.48□□□□□ -2.17
SPDEFO95238 RNU11-2P-201ENST00000516898 142 ntBASIC1.48□□□□□ -2.17
SPDEFO95238 RNU6-165P-201ENST00000517170 99 ntBASIC1.48□□□□□ -2.17
SPDEFO95238 AP000753.3-201ENST00000604083 169 ntBASIC1.48□□□□□ -2.17
SPDEFO95238 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.47□□□□□ -2.17
SPDEFO95238 MIR103A2-201ENST00000362154 78 ntBASIC1.47□□□□□ -2.17
SPDEFO95238 RNA5SP264-201ENST00000363115 107 ntBASIC1.47□□□□□ -2.17
SPDEFO95238 Y_RNA.342-201ENST00000365352 113 ntBASIC1.47□□□□□ -2.17
SPDEFO95238 RNU6-1321P-201ENST00000390905 107 ntBASIC1.47□□□□□ -2.17
SPDEFO95238 RNU6-447P-201ENST00000410293 104 ntBASIC1.47□□□□□ -2.17
SPDEFO95238 RNU6-1118P-201ENST00000410382 104 ntBASIC1.47□□□□□ -2.17
SPDEFO95238 RNU6-1076P-201ENST00000410397 104 ntBASIC1.47□□□□□ -2.17
SPDEFO95238 RNU6-355P-201ENST00000410427 104 ntBASIC1.47□□□□□ -2.17
SPDEFO95238 RNU6-791P-201ENST00000410467 104 ntBASIC1.47□□□□□ -2.17
SPDEFO95238 RNU6-705P-201ENST00000410601 104 ntBASIC1.47□□□□□ -2.17
SPDEFO95238 RNU6-1100P-201ENST00000410691 104 ntBASIC1.47□□□□□ -2.17
SPDEFO95238 RNU6-860P-201ENST00000410860 104 ntBASIC1.47□□□□□ -2.17
SPDEFO95238 RNU6-1217P-201ENST00000411276 104 ntBASIC1.47□□□□□ -2.17
SPDEFO95238 RNU6-785P-201ENST00000411324 104 ntBASIC1.47□□□□□ -2.17
SPDEFO95238 RNU6-795P-201ENST00000516323 103 ntBASIC1.47□□□□□ -2.17
SPDEFO95238 RNU6-1006P-201ENST00000516998 103 ntBASIC1.47□□□□□ -2.17
SPDEFO95238 AC096720.1-201ENST00000604441 183 ntBASIC1.47□□□□□ -2.17
SPDEFO95238 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.47□□□□□ -2.17
SPDEFO95238 U6.90-201ENST00000614007 104 ntBASIC1.47□□□□□ -2.17
SPDEFO95238 AC105081.1-201ENST00000617727 106 ntBASIC1.47□□□□□ -2.17
SPDEFO95238 MALAT1.1-201ENST00000618249 95 ntBASIC1.47□□□□□ -2.17
SPDEFO95238 MIR6740-201ENST00000618268 113 ntBASIC1.47□□□□□ -2.17
SPDEFO95238 U6.70-201ENST00000620287 104 ntBASIC1.47□□□□□ -2.17
SPDEFO95238 MIR6516-201ENST00000630554 81 ntBASIC1.47□□□□□ -2.17
SPDEFO95238 AC091304.10-201ENST00000641554 121 ntBASIC1.47□□□□□ -2.17
SPDEFO95238 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.46□□□□□ -2.18
SPDEFO95238 SNORD114-1-201ENST00000362705 72 ntBASIC1.46□□□□□ -2.18
SPDEFO95238 Y_RNA.95-201ENST00000363079 95 ntBASIC1.46□□□□□ -2.18
SPDEFO95238 RNU6-865P-201ENST00000364772 107 ntBASIC1.46□□□□□ -2.18
SPDEFO95238 RNU6-949P-201ENST00000384040 107 ntBASIC1.46□□□□□ -2.18
SPDEFO95238 MIR34C-201ENST00000384831 77 ntBASIC1.46□□□□□ -2.18
SPDEFO95238 Y_RNA.659-201ENST00000515994 113 ntBASIC1.46□□□□□ -2.18
SPDEFO95238 AL512310.8-201ENST00000550183 120 ntBASIC1.46□□□□□ -2.18
SPDEFO95238 MIR4777-201ENST00000583710 86 ntBASIC1.46□□□□□ -2.18
SPDEFO95238 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.46□□□□□ -2.18
SPDEFO95238 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.46□□□□□ -2.18
SPDEFO95238 AL161722.3-201ENST00000605789 2983 ntBASIC1.46□□□□□ -2.18
SPDEFO95238 MIR377-201ENST00000362145 69 ntBASIC1.45□□□□□ -2.18
SPDEFO95238 SNORD38.1-201ENST00000363863 68 ntBASIC1.45□□□□□ -2.18
SPDEFO95238 Y_RNA.247-201ENST00000364500 92 ntBASIC1.45□□□□□ -2.18
SPDEFO95238 RNU6-60P-201ENST00000364792 103 ntBASIC1.45□□□□□ -2.18
SPDEFO95238 MIR583-201ENST00000384846 75 ntBASIC1.45□□□□□ -2.18
SPDEFO95238 RNU6-205P-201ENST00000390858 107 ntBASIC1.45□□□□□ -2.18
SPDEFO95238 RNU6-613P-201ENST00000410412 108 ntBASIC1.45□□□□□ -2.18
SPDEFO95238 RNU7-48P-201ENST00000458875 63 ntBASIC1.45□□□□□ -2.18
SPDEFO95238 MIR548Z-201ENST00000584743 97 ntBASIC1.45□□□□□ -2.18
SPDEFO95238 MIR376B-201ENST00000614515 100 ntBASIC1.45□□□□□ -2.18
SPDEFO95238 Y_RNA.140-201ENST00000363474 103 ntBASIC1.44□□□□□ -2.18
SPDEFO95238 Y_RNA.220-201ENST00000364244 109 ntBASIC1.44□□□□□ -2.18
SPDEFO95238 RNU6-294P-201ENST00000364999 102 ntBASIC1.44□□□□□ -2.18
SPDEFO95238 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
SPDEFO95238 RNU6-644P-201ENST00000391155 98 ntBASIC1.44□□□□□ -2.18
SPDEFO95238 RNU1-78P-201ENST00000391248 165 ntBASIC1.44□□□□□ -2.18
SPDEFO95238 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.44□□□□□ -2.18
SPDEFO95238 RNU6-1165P-201ENST00000410119 107 ntBASIC1.44□□□□□ -2.18
SPDEFO95238 RPS27P16-201ENST00000425758 201 ntBASIC1.44□□□□□ -2.18
SPDEFO95238 RPS29P28-201ENST00000446439 141 ntBASIC1.44□□□□□ -2.18
SPDEFO95238 RPS29P23-201ENST00000458635 123 ntBASIC1.44□□□□□ -2.18
SPDEFO95238 RNU7-61P-201ENST00000515897 61 ntBASIC1.44□□□□□ -2.18
SPDEFO95238 MIR4439-201ENST00000583746 80 ntBASIC1.44□□□□□ -2.18
SPDEFO95238 MIR30D-201ENST00000362283 70 ntBASIC1.43□□□□□ -2.18
SPDEFO95238 Y_RNA.98-201ENST00000363109 102 ntBASIC1.43□□□□□ -2.18
SPDEFO95238 RNU6-654P-201ENST00000364373 107 ntBASIC1.43□□□□□ -2.18
SPDEFO95238 RNY1P7-201ENST00000384743 110 ntBASIC1.43□□□□□ -2.18
SPDEFO95238 AC245517.4-201ENST00000448601 281 ntBASIC1.43□□□□□ -2.18
SPDEFO95238 RNU7-62P-201ENST00000458856 62 ntBASIC1.43□□□□□ -2.18
SPDEFO95238 RPL23AP94-201ENST00000512518 302 ntBASIC1.43□□□□□ -2.18
SPDEFO95238 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.43□□□□□ -2.18
SPDEFO95238 SNORA4-201ENST00000584302 138 ntBASIC1.43□□□□□ -2.18
SPDEFO95238 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.43□□□□□ -2.18
SPDEFO95238 Y_RNA.96-201ENST00000363092 109 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 185.4 ms