Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 SNORA25.16-201ENST00000516741 121 ntBASIC0.17□□□□□ -2.38
TRIM3O75382 AP003327.1-201ENST00000529684 127 ntBASIC0.17□□□□□ -2.38
TRIM3O75382 MTND5P34-201ENST00000568888 325 ntBASIC0.17□□□□□ -2.38
TRIM3O75382 MIR6779-201ENST00000617283 64 ntBASIC0.17□□□□□ -2.38
TRIM3O75382 AC078938.1-201ENST00000620993 318 ntBASIC0.17□□□□□ -2.38
TRIM3O75382 Y_RNA.182-201ENST00000363880 111 ntBASIC0.16□□□□□ -2.38
TRIM3O75382 Y_RNA.288-201ENST00000364854 92 ntBASIC0.16□□□□□ -2.38
TRIM3O75382 RNY1P13-201ENST00000365030 105 ntBASIC0.16□□□□□ -2.38
TRIM3O75382 RNU6-1336P-201ENST00000383886 109 ntBASIC0.16□□□□□ -2.38
TRIM3O75382 Y_RNA.477-201ENST00000384352 108 ntBASIC0.16□□□□□ -2.38
TRIM3O75382 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.16□□□□□ -2.38
TRIM3O75382 MIR548H3-201ENST00000408771 118 ntBASIC0.16□□□□□ -2.38
TRIM3O75382 MTND2P23-201ENST00000422990 651 ntBASIC0.16□□□□□ -2.38
TRIM3O75382 RNA5SP268-201ENST00000516828 124 ntBASIC0.16□□□□□ -2.38
TRIM3O75382 RNU6-1258P-201ENST00000516911 111 ntBASIC0.16□□□□□ -2.38
TRIM3O75382 MIR4431-201ENST00000579990 94 ntBASIC0.16□□□□□ -2.38
TRIM3O75382 MIR4514-201ENST00000581410 57 ntBASIC0.16□□□□□ -2.38
TRIM3O75382 Y_RNA.812-201ENST00000610788 101 ntBASIC0.16□□□□□ -2.38
TRIM3O75382 Y_RNA.784-201ENST00000613803 101 ntBASIC0.16□□□□□ -2.38
TRIM3O75382 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.16□□□□□ -2.38
TRIM3O75382 Y_RNA.787-201ENST00000616522 101 ntBASIC0.16□□□□□ -2.38
TRIM3O75382 Y_RNA.780-201ENST00000617336 101 ntBASIC0.16□□□□□ -2.38
TRIM3O75382 Y_RNA.801-201ENST00000619005 101 ntBASIC0.16□□□□□ -2.38
TRIM3O75382 MTND5P32-201ENST00000560711 1802 ntBASIC0.15□□□□□ -2.38
TRIM3O75382 Y_RNA.149-201ENST00000363558 117 ntBASIC0.15□□□□□ -2.39
TRIM3O75382 Y_RNA.171-201ENST00000363760 102 ntBASIC0.15□□□□□ -2.39
TRIM3O75382 RNU6-643P-201ENST00000384018 107 ntBASIC0.15□□□□□ -2.39
TRIM3O75382 MIR624-201ENST00000385217 97 ntBASIC0.15□□□□□ -2.39
TRIM3O75382 AL358176.2-201ENST00000425769 204 ntBASIC0.15□□□□□ -2.39
TRIM3O75382 SUMO1P3-201ENST00000439961 304 ntBASIC0.15□□□□□ -2.39
TRIM3O75382 Y_RNA.697-201ENST00000516776 113 ntBASIC0.15□□□□□ -2.39
TRIM3O75382 RNU6-765P-201ENST00000516916 99 ntBASIC0.15□□□□□ -2.39
TRIM3O75382 Y_RNA.757-201ENST00000578934 114 ntBASIC0.15□□□□□ -2.39
TRIM3O75382 MIR4308-201ENST00000580634 81 ntBASIC0.15□□□□□ -2.39
TRIM3O75382 AC023932.2-201ENST00000603176 175 ntBASIC0.15□□□□□ -2.39
TRIM3O75382 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.15□□□□□ -2.39
TRIM3O75382 Y_RNA.536-201ENST00000384621 113 ntBASIC0.14□□□□□ -2.39
TRIM3O75382 RNU6-291P-201ENST00000384720 107 ntBASIC0.14□□□□□ -2.39
TRIM3O75382 RNU6-535P-201ENST00000384722 107 ntBASIC0.14□□□□□ -2.39
TRIM3O75382 MIR7-2-201ENST00000384970 110 ntBASIC0.14□□□□□ -2.39
TRIM3O75382 RNU5E-9P-201ENST00000411164 104 ntBASIC0.14□□□□□ -2.39
TRIM3O75382 AC069271.1-201ENST00000445577 156 ntBASIC0.14□□□□□ -2.39
TRIM3O75382 SNORA25.7-201ENST00000364375 127 ntBASIC0.13□□□□□ -2.39
TRIM3O75382 Y_RNA.258-201ENST00000364613 105 ntBASIC0.13□□□□□ -2.39
TRIM3O75382 RNU6-738P-201ENST00000384531 106 ntBASIC0.13□□□□□ -2.39
TRIM3O75382 Y_RNA.515-201ENST00000384535 112 ntBASIC0.13□□□□□ -2.39
TRIM3O75382 Y_RNA.539-201ENST00000384635 107 ntBASIC0.13□□□□□ -2.39
TRIM3O75382 Y_RNA.571-201ENST00000384753 98 ntBASIC0.13□□□□□ -2.39
TRIM3O75382 RNU2-59P-201ENST00000410482 191 ntBASIC0.13□□□□□ -2.39
TRIM3O75382 RNU6-1086P-201ENST00000410930 100 ntBASIC0.13□□□□□ -2.39
TRIM3O75382 RNU6-893P-201ENST00000458841 100 ntBASIC0.13□□□□□ -2.39
TRIM3O75382 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.13□□□□□ -2.39
TRIM3O75382 MTND1P19-201ENST00000511780 315 ntBASIC0.13□□□□□ -2.39
TRIM3O75382 RNU7-79P-201ENST00000516082 62 ntBASIC0.13□□□□□ -2.39
TRIM3O75382 DEFB131E-201ENST00000532329 154 ntBASIC0.13□□□□□ -2.39
TRIM3O75382 MIR8087-201ENST00000612745 78 ntBASIC0.13□□□□□ -2.39
TRIM3O75382 MIR6718-201ENST00000616153 80 ntBASIC0.13□□□□□ -2.39
TRIM3O75382 Y_RNA.121-201ENST00000363309 113 ntBASIC0.12□□□□□ -2.39
TRIM3O75382 Y_RNA.174-201ENST00000363781 105 ntBASIC0.12□□□□□ -2.39
TRIM3O75382 RNU4-67P-201ENST00000364569 141 ntBASIC0.12□□□□□ -2.39
TRIM3O75382 RNU4-70P-201ENST00000384579 139 ntBASIC0.12□□□□□ -2.39
TRIM3O75382 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
TRIM3O75382 Y_RNA.626-201ENST00000411288 95 ntBASIC0.12□□□□□ -2.39
TRIM3O75382 RNA5SP227-201ENST00000516184 113 ntBASIC0.12□□□□□ -2.39
TRIM3O75382 AC069113.3-201ENST00000521019 150 ntBASIC0.12□□□□□ -2.39
TRIM3O75382 MRPS18CP4-201ENST00000535821 231 ntBASIC0.12□□□□□ -2.39
TRIM3O75382 MIR7107-201ENST00000611489 80 ntBASIC0.12□□□□□ -2.39
TRIM3O75382 RNU6-1229P-201ENST00000364295 107 ntBASIC0.11□□□□□ -2.39
TRIM3O75382 RNY1P6-201ENST00000384193 109 ntBASIC0.11□□□□□ -2.39
TRIM3O75382 Y_RNA.470-201ENST00000384307 117 ntBASIC0.11□□□□□ -2.39
TRIM3O75382 Y_RNA.521-201ENST00000384560 114 ntBASIC0.11□□□□□ -2.39
TRIM3O75382 Y_RNA.562-201ENST00000384695 113 ntBASIC0.11□□□□□ -2.39
TRIM3O75382 RNU6-863P-201ENST00000515989 104 ntBASIC0.11□□□□□ -2.39
TRIM3O75382 RNA5SP330-201ENST00000517096 96 ntBASIC0.11□□□□□ -2.39
TRIM3O75382 AC112693.2-201ENST00000556538 232 ntBASIC0.11□□□□□ -2.39
TRIM3O75382 Y_RNA.423-201ENST00000384057 113 ntBASIC0.1□□□□□ -2.39
TRIM3O75382 MIR1295A-201ENST00000408463 79 ntBASIC0.1□□□□□ -2.39
TRIM3O75382 RNA5SP144-201ENST00000410846 116 ntBASIC0.1□□□□□ -2.39
TRIM3O75382 RNU7-113P-201ENST00000459273 62 ntBASIC0.1□□□□□ -2.39
TRIM3O75382 RNU6-1194P-201ENST00000516208 104 ntBASIC0.1□□□□□ -2.39
TRIM3O75382 SNORA62.5-201ENST00000516634 120 ntBASIC0.1□□□□□ -2.39
TRIM3O75382 RNU6-531P-201ENST00000516694 104 ntBASIC0.1□□□□□ -2.39
TRIM3O75382 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
TRIM3O75382 U6.106-201ENST00000636360 105 ntBASIC0.1□□□□□ -2.39
TRIM3O75382 RNA5SP133-201ENST00000363368 119 ntBASIC0.09□□□□□ -2.4
TRIM3O75382 RNU6-275P-201ENST00000364910 107 ntBASIC0.09□□□□□ -2.4
TRIM3O75382 SNORA32-201ENST00000384072 121 ntBASIC0.09□□□□□ -2.4
TRIM3O75382 SNORD28-201ENST00000384706 75 ntBASIC0.09□□□□□ -2.4
TRIM3O75382 RNA5SP33-201ENST00000516687 98 ntBASIC0.09□□□□□ -2.4
TRIM3O75382 SCARNA16.5-201ENST00000517114 183 ntBASIC0.09□□□□□ -2.4
TRIM3O75382 RNA5SP47-201ENST00000517230 109 ntBASIC0.09□□□□□ -2.4
TRIM3O75382 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.09□□□□□ -2.4
TRIM3O75382 MIR4315-1-201ENST00000636800 73 ntBASIC0.09□□□□□ -2.4
TRIM3O75382 MIR4315-2-201ENST00000640925 73 ntBASIC0.09□□□□□ -2.4
TRIM3O75382 Y_RNA.52-201ENST00000362760 96 ntBASIC0.08□□□□□ -2.4
TRIM3O75382 RNA5SP245-201ENST00000364239 121 ntBASIC0.08□□□□□ -2.4
TRIM3O75382 Y_RNA.412-201ENST00000384001 104 ntBASIC0.08□□□□□ -2.4
TRIM3O75382 RNU6-187P-201ENST00000384139 106 ntBASIC0.08□□□□□ -2.4
TRIM3O75382 MIR568-201ENST00000385036 95 ntBASIC0.08□□□□□ -2.4
TRIM3O75382 MIR1197-201ENST00000408818 88 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 246.6 ms