Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 RNU7-43P-201ENST00000516554 64 ntBASIC1.42□□□□□ -2.18
SMAD6O43541 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.42□□□□□ -2.18
SMAD6O43541 MIR4764-201ENST00000580680 88 ntBASIC1.42□□□□□ -2.18
SMAD6O43541 MIR8055-201ENST00000610739 97 ntBASIC1.42□□□□□ -2.18
SMAD6O43541 Y_RNA.818-201ENST00000618813 71 ntBASIC1.42□□□□□ -2.18
SMAD6O43541 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
SMAD6O43541 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
SMAD6O43541 SNORA7.1-201ENST00000363750 139 ntBASIC1.41□□□□□ -2.18
SMAD6O43541 RNU4-67P-201ENST00000364569 141 ntBASIC1.41□□□□□ -2.18
SMAD6O43541 SNORA1.1-201ENST00000364671 133 ntBASIC1.41□□□□□ -2.18
SMAD6O43541 MIR520C-201ENST00000385005 87 ntBASIC1.41□□□□□ -2.18
SMAD6O43541 MIR605-201ENST00000385078 83 ntBASIC1.41□□□□□ -2.18
SMAD6O43541 RNY4P29-201ENST00000410801 97 ntBASIC1.41□□□□□ -2.18
SMAD6O43541 RPS3AP1-201ENST00000413190 320 ntBASIC1.41□□□□□ -2.18
SMAD6O43541 AL353813.1-201ENST00000440700 253 ntBASIC1.41□□□□□ -2.18
SMAD6O43541 AC009474.2-201ENST00000451383 136 ntBASIC1.41□□□□□ -2.18
SMAD6O43541 DEFB131E-201ENST00000532329 154 ntBASIC1.41□□□□□ -2.18
SMAD6O43541 RNY3P2-201ENST00000362918 102 ntBASIC1.4□□□□□ -2.19
SMAD6O43541 RNU6-1099P-201ENST00000363533 107 ntBASIC1.4□□□□□ -2.19
SMAD6O43541 Y_RNA.360-201ENST00000365512 102 ntBASIC1.4□□□□□ -2.19
SMAD6O43541 RNA5SP259-201ENST00000365541 109 ntBASIC1.4□□□□□ -2.19
SMAD6O43541 RNU6-409P-201ENST00000384114 104 ntBASIC1.4□□□□□ -2.19
SMAD6O43541 SNORD26-201ENST00000384147 75 ntBASIC1.4□□□□□ -2.19
SMAD6O43541 MIR653-201ENST00000385279 96 ntBASIC1.4□□□□□ -2.19
SMAD6O43541 SNORD77B-201ENST00000391112 67 ntBASIC1.4□□□□□ -2.19
SMAD6O43541 SNORA7.5-201ENST00000410672 110 ntBASIC1.4□□□□□ -2.19
SMAD6O43541 RNU6-733P-201ENST00000410759 104 ntBASIC1.4□□□□□ -2.19
SMAD6O43541 MTATP8P2-201ENST00000435212 202 ntBASIC1.4□□□□□ -2.19
SMAD6O43541 AC108729.3-201ENST00000513484 108 ntBASIC1.4□□□□□ -2.19
SMAD6O43541 RNA5SP61-201ENST00000516453 100 ntBASIC1.4□□□□□ -2.19
SMAD6O43541 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.4□□□□□ -2.19
SMAD6O43541 AC062037.1-201ENST00000605302 128 ntBASIC1.4□□□□□ -2.19
SMAD6O43541 MIR26B-201ENST00000362251 77 ntBASIC1.39□□□□□ -2.19
SMAD6O43541 RNU4-36P-201ENST00000364294 144 ntBASIC1.39□□□□□ -2.19
SMAD6O43541 RNU6-342P-201ENST00000384521 104 ntBASIC1.39□□□□□ -2.19
SMAD6O43541 MIR513A1-201ENST00000385138 129 ntBASIC1.39□□□□□ -2.19
SMAD6O43541 MIR577-201ENST00000385196 96 ntBASIC1.39□□□□□ -2.19
SMAD6O43541 RNU6-679P-201ENST00000391003 106 ntBASIC1.39□□□□□ -2.19
SMAD6O43541 MIR1302-4-201ENST00000408701 150 ntBASIC1.39□□□□□ -2.19
SMAD6O43541 AC090844.1-201ENST00000422019 156 ntBASIC1.39□□□□□ -2.19
SMAD6O43541 JTBP1-201ENST00000441314 247 ntBASIC1.39□□□□□ -2.19
SMAD6O43541 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.39□□□□□ -2.19
SMAD6O43541 RNU7-41P-201ENST00000515917 61 ntBASIC1.39□□□□□ -2.19
SMAD6O43541 RNU6-158P-201ENST00000517104 100 ntBASIC1.39□□□□□ -2.19
SMAD6O43541 RNU6-902P-201ENST00000517212 91 ntBASIC1.39□□□□□ -2.19
SMAD6O43541 MIR548AO-201ENST00000579992 96 ntBASIC1.39□□□□□ -2.19
SMAD6O43541 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.39□□□□□ -2.19
SMAD6O43541 MIR8065-201ENST00000620577 100 ntBASIC1.39□□□□□ -2.19
SMAD6O43541 Z97988.1-201ENST00000637697 135 ntBASIC1.39□□□□□ -2.19
SMAD6O43541 Y_RNA.107-201ENST00000363190 121 ntBASIC1.38□□□□□ -2.19
SMAD6O43541 RNU6-832P-201ENST00000363319 107 ntBASIC1.38□□□□□ -2.19
SMAD6O43541 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.38□□□□□ -2.19
SMAD6O43541 AC245047.7-201ENST00000440265 293 ntBASIC1.38□□□□□ -2.19
SMAD6O43541 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.38□□□□□ -2.19
SMAD6O43541 RNU6-322P-201ENST00000516010 103 ntBASIC1.38□□□□□ -2.19
SMAD6O43541 SCARNA23-201ENST00000516060 130 ntBASIC1.38□□□□□ -2.19
SMAD6O43541 RNU6-521P-201ENST00000516663 105 ntBASIC1.38□□□□□ -2.19
SMAD6O43541 RNU6-844P-201ENST00000517175 102 ntBASIC1.38□□□□□ -2.19
SMAD6O43541 MIR4694-201ENST00000578534 80 ntBASIC1.38□□□□□ -2.19
SMAD6O43541 FAM71BP1-201ENST00000604431 523 ntBASIC1.38□□□□□ -2.19
SMAD6O43541 MIR4251-201ENST00000635819 61 ntBASIC1.38□□□□□ -2.19
SMAD6O43541 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
SMAD6O43541 Y_RNA.93-201ENST00000363066 109 ntBASIC1.37□□□□□ -2.19
SMAD6O43541 Y_RNA.342-201ENST00000365352 113 ntBASIC1.37□□□□□ -2.19
SMAD6O43541 SNORA18-201ENST00000384416 132 ntBASIC1.37□□□□□ -2.19
SMAD6O43541 MIR150-201ENST00000385048 84 ntBASIC1.37□□□□□ -2.19
SMAD6O43541 SNORD41-201ENST00000386967 70 ntBASIC1.37□□□□□ -2.19
SMAD6O43541 AL451046.2-201ENST00000403074 277 ntBASIC1.37□□□□□ -2.19
SMAD6O43541 Y_RNA.601-201ENST00000410500 113 ntBASIC1.37□□□□□ -2.19
SMAD6O43541 RNU6-602P-201ENST00000411155 105 ntBASIC1.37□□□□□ -2.19
SMAD6O43541 RNU6-592P-201ENST00000411333 103 ntBASIC1.37□□□□□ -2.19
SMAD6O43541 RNU6-922P-201ENST00000516753 99 ntBASIC1.37□□□□□ -2.19
SMAD6O43541 MIR548Z-201ENST00000584743 97 ntBASIC1.37□□□□□ -2.19
SMAD6O43541 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
SMAD6O43541 Y_RNA.466-201ENST00000384294 113 ntBASIC1.36□□□□□ -2.19
SMAD6O43541 SNORA26.2-201ENST00000390922 122 ntBASIC1.36□□□□□ -2.19
SMAD6O43541 RNU1-123P-201ENST00000458950 160 ntBASIC1.36□□□□□ -2.19
SMAD6O43541 RNU6-1053P-201ENST00000515930 101 ntBASIC1.36□□□□□ -2.19
SMAD6O43541 RNU6-795P-201ENST00000516323 103 ntBASIC1.36□□□□□ -2.19
SMAD6O43541 SNORD111.1-201ENST00000516421 86 ntBASIC1.36□□□□□ -2.19
SMAD6O43541 SNORA77B-201ENST00000578179 125 ntBASIC1.36□□□□□ -2.19
SMAD6O43541 AL359821.1-201ENST00000605519 182 ntBASIC1.36□□□□□ -2.19
SMAD6O43541 AL442128.1-201ENST00000615151 90 ntBASIC1.36□□□□□ -2.19
SMAD6O43541 MALAT1.1-201ENST00000618249 95 ntBASIC1.36□□□□□ -2.19
SMAD6O43541 MIR8063-201ENST00000621930 81 ntBASIC1.36□□□□□ -2.19
SMAD6O43541 MIR2052-201ENST00000636055 55 ntBASIC1.36□□□□□ -2.19
SMAD6O43541 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
SMAD6O43541 Y_RNA.10-201ENST00000362371 110 ntBASIC1.35□□□□□ -2.19
SMAD6O43541 RNA5SP173-201ENST00000364857 136 ntBASIC1.35□□□□□ -2.19
SMAD6O43541 RNU6-573P-201ENST00000383938 106 ntBASIC1.35□□□□□ -2.19
SMAD6O43541 RNU6-1201P-201ENST00000384227 107 ntBASIC1.35□□□□□ -2.19
SMAD6O43541 RNU6-321P-201ENST00000410912 106 ntBASIC1.35□□□□□ -2.19
SMAD6O43541 AC004223.1-201ENST00000479840 271 ntBASIC1.35□□□□□ -2.19
SMAD6O43541 RNU7-35P-201ENST00000517174 62 ntBASIC1.35□□□□□ -2.19
SMAD6O43541 CYP3A52P-201ENST00000563326 91 ntBASIC1.35□□□□□ -2.19
SMAD6O43541 AC015688.6-201ENST00000577737 104 ntBASIC1.35□□□□□ -2.19
SMAD6O43541 MIR7974-201ENST00000615835 79 ntBASIC1.35□□□□□ -2.19
SMAD6O43541 AC012531.4-201ENST00000616509 177 ntBASIC1.35□□□□□ -2.19
SMAD6O43541 RNY1P10-201ENST00000363268 113 ntBASIC1.34□□□□□ -2.19
SMAD6O43541 Y_RNA.354-201ENST00000365448 111 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 269.9 ms