Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 Y_RNA.207-201ENST00000364142 106 ntBASIC-2.3□□□□□ -2.78
CHKB-CPT1BH3BT56 Y_RNA.331-201ENST00000365267 102 ntBASIC-2.3□□□□□ -2.78
CHKB-CPT1BH3BT56 MIR216B-201ENST00000390186 82 ntBASIC-2.3□□□□□ -2.78
CHKB-CPT1BH3BT56 RNU6-337P-201ENST00000391243 106 ntBASIC-2.3□□□□□ -2.78
CHKB-CPT1BH3BT56 RNU6-759P-201ENST00000516740 103 ntBASIC-2.3□□□□□ -2.78
CHKB-CPT1BH3BT56 RNU6-835P-201ENST00000516974 104 ntBASIC-2.3□□□□□ -2.78
CHKB-CPT1BH3BT56 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-2.3□□□□□ -2.78
CHKB-CPT1BH3BT56 SNORA2.1-201ENST00000363089 137 ntBASIC-2.31□□□□□ -2.78
CHKB-CPT1BH3BT56 RNA5SP144-201ENST00000410846 116 ntBASIC-2.31□□□□□ -2.78
CHKB-CPT1BH3BT56 AC092794.2-201ENST00000620933 563 ntBASIC-2.31□□□□□ -2.78
CHKB-CPT1BH3BT56 Y_RNA.91-201ENST00000363042 107 ntBASIC-2.32□□□□□ -2.78
CHKB-CPT1BH3BT56 SNORD18.1-201ENST00000363807 70 ntBASIC-2.32□□□□□ -2.78
CHKB-CPT1BH3BT56 Y_RNA.214-201ENST00000364201 112 ntBASIC-2.32□□□□□ -2.78
CHKB-CPT1BH3BT56 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-2.32□□□□□ -2.78
CHKB-CPT1BH3BT56 Y_RNA.596-201ENST00000410462 109 ntBASIC-2.32□□□□□ -2.78
CHKB-CPT1BH3BT56 Y_RNA.618-201ENST00000410949 107 ntBASIC-2.32□□□□□ -2.78
CHKB-CPT1BH3BT56 MTND2P14-201ENST00000482139 351 ntBASIC-2.32□□□□□ -2.78
CHKB-CPT1BH3BT56 RNU7-70P-201ENST00000516941 66 ntBASIC-2.32□□□□□ -2.78
CHKB-CPT1BH3BT56 MIR4659A-201ENST00000580269 81 ntBASIC-2.32□□□□□ -2.78
CHKB-CPT1BH3BT56 MIR4464-201ENST00000580818 92 ntBASIC-2.32□□□□□ -2.78
CHKB-CPT1BH3BT56 MIR1244-1-201ENST00000612829 85 ntBASIC-2.32□□□□□ -2.78
CHKB-CPT1BH3BT56 MIR1244-3-201ENST00000635744 85 ntBASIC-2.32□□□□□ -2.78
CHKB-CPT1BH3BT56 MIR1244-2-201ENST00000636449 85 ntBASIC-2.32□□□□□ -2.78
CHKB-CPT1BH3BT56 MIR1244-4-202ENST00000636813 85 ntBASIC-2.32□□□□□ -2.78
CHKB-CPT1BH3BT56 MIR367-201ENST00000362299 68 ntBASIC-2.33□□□□□ -2.78
CHKB-CPT1BH3BT56 Y_RNA.35-201ENST00000362601 101 ntBASIC-2.33□□□□□ -2.78
CHKB-CPT1BH3BT56 SNORD114-4-201ENST00000363962 75 ntBASIC-2.33□□□□□ -2.78
CHKB-CPT1BH3BT56 RNU6-746P-201ENST00000384112 109 ntBASIC-2.33□□□□□ -2.78
CHKB-CPT1BH3BT56 Y_RNA.542-201ENST00000384641 111 ntBASIC-2.33□□□□□ -2.78
CHKB-CPT1BH3BT56 RNU6-466P-201ENST00000391224 103 ntBASIC-2.33□□□□□ -2.78
CHKB-CPT1BH3BT56 MIR548H1-201ENST00000408610 102 ntBASIC-2.33□□□□□ -2.78
CHKB-CPT1BH3BT56 MRPS36P3-201ENST00000519284 130 ntBASIC-2.33□□□□□ -2.78
CHKB-CPT1BH3BT56 AC097639.2-201ENST00000603159 172 ntBASIC-2.33□□□□□ -2.78
CHKB-CPT1BH3BT56 AC133104.2-201ENST00000615272 193 ntBASIC-2.33□□□□□ -2.78
CHKB-CPT1BH3BT56 AC084781.2-201ENST00000615568 161 ntBASIC-2.33□□□□□ -2.78
CHKB-CPT1BH3BT56 AP001362.1-201ENST00000625165 124 ntBASIC-2.33□□□□□ -2.78
CHKB-CPT1BH3BT56 Y_RNA.77-201ENST00000362962 107 ntBASIC-2.34□□□□□ -2.78
CHKB-CPT1BH3BT56 Y_RNA.98-201ENST00000363109 102 ntBASIC-2.34□□□□□ -2.78
CHKB-CPT1BH3BT56 Y_RNA.105-201ENST00000363182 111 ntBASIC-2.34□□□□□ -2.78
CHKB-CPT1BH3BT56 Y_RNA.120-201ENST00000363304 110 ntBASIC-2.34□□□□□ -2.78
CHKB-CPT1BH3BT56 Y_RNA.426-201ENST00000384068 113 ntBASIC-2.34□□□□□ -2.78
CHKB-CPT1BH3BT56 Y_RNA.543-201ENST00000384649 107 ntBASIC-2.34□□□□□ -2.78
CHKB-CPT1BH3BT56 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-2.34□□□□□ -2.78
CHKB-CPT1BH3BT56 Y_RNA.615-201ENST00000410769 117 ntBASIC-2.34□□□□□ -2.78
CHKB-CPT1BH3BT56 MIR2053-201ENST00000459295 91 ntBASIC-2.34□□□□□ -2.78
CHKB-CPT1BH3BT56 RNA5SP476-201ENST00000516613 103 ntBASIC-2.34□□□□□ -2.78
CHKB-CPT1BH3BT56 MIR548AE2-201ENST00000583456 67 ntBASIC-2.34□□□□□ -2.78
CHKB-CPT1BH3BT56 MIR3942-201ENST00000585264 109 ntBASIC-2.34□□□□□ -2.78
CHKB-CPT1BH3BT56 TRDV1-202ENST00000621643 102 ntBASIC-2.34□□□□□ -2.78
CHKB-CPT1BH3BT56 MIR6874-201ENST00000635894 71 ntBASIC-2.34□□□□□ -2.78
CHKB-CPT1BH3BT56 U6.100-201ENST00000636230 99 ntBASIC-2.34□□□□□ -2.78
CHKB-CPT1BH3BT56 Y_RNA.127-201ENST00000363386 109 ntBASIC-2.35□□□□□ -2.79
CHKB-CPT1BH3BT56 SNORD115-33-201ENST00000363723 82 ntBASIC-2.35□□□□□ -2.79
CHKB-CPT1BH3BT56 Y_RNA.342-201ENST00000365352 113 ntBASIC-2.35□□□□□ -2.79
CHKB-CPT1BH3BT56 Y_RNA.592-201ENST00000410274 109 ntBASIC-2.35□□□□□ -2.79
CHKB-CPT1BH3BT56 Y_RNA.616-201ENST00000410835 95 ntBASIC-2.35□□□□□ -2.79
CHKB-CPT1BH3BT56 RNA5SP272-201ENST00000516095 111 ntBASIC-2.35□□□□□ -2.79
CHKB-CPT1BH3BT56 MIR4724-201ENST00000579485 89 ntBASIC-2.35□□□□□ -2.79
CHKB-CPT1BH3BT56 RNU6-208P-201ENST00000362431 107 ntBASIC-2.36□□□□□ -2.79
CHKB-CPT1BH3BT56 Y_RNA.414-201ENST00000384011 101 ntBASIC-2.36□□□□□ -2.79
CHKB-CPT1BH3BT56 Y_RNA.448-201ENST00000384185 108 ntBASIC-2.36□□□□□ -2.79
CHKB-CPT1BH3BT56 Y_RNA.560-201ENST00000384689 102 ntBASIC-2.36□□□□□ -2.79
CHKB-CPT1BH3BT56 RNY3P10-201ENST00000384764 102 ntBASIC-2.36□□□□□ -2.79
CHKB-CPT1BH3BT56 SNORD63.1-201ENST00000516178 80 ntBASIC-2.36□□□□□ -2.79
CHKB-CPT1BH3BT56 RNA5SP153-201ENST00000516498 76 ntBASIC-2.36□□□□□ -2.79
CHKB-CPT1BH3BT56 RNU6-762P-201ENST00000517107 102 ntBASIC-2.36□□□□□ -2.79
CHKB-CPT1BH3BT56 MTND3P12-201ENST00000559068 328 ntBASIC-2.36□□□□□ -2.79
CHKB-CPT1BH3BT56 MIR4308-201ENST00000580634 81 ntBASIC-2.36□□□□□ -2.79
CHKB-CPT1BH3BT56 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-2.36□□□□□ -2.79
CHKB-CPT1BH3BT56 AC068137.3-201ENST00000639191 341 ntBASIC-2.36□□□□□ -2.79
CHKB-CPT1BH3BT56 RNU6-704P-201ENST00000364162 103 ntBASIC-2.37□□□□□ -2.79
CHKB-CPT1BH3BT56 MIR516A2-201ENST00000384888 90 ntBASIC-2.37□□□□□ -2.79
CHKB-CPT1BH3BT56 MIR516A1-201ENST00000385033 90 ntBASIC-2.37□□□□□ -2.79
CHKB-CPT1BH3BT56 RNU6-1248P-201ENST00000391096 64 ntBASIC-2.37□□□□□ -2.79
CHKB-CPT1BH3BT56 SNORA26.4-201ENST00000391188 123 ntBASIC-2.37□□□□□ -2.79
CHKB-CPT1BH3BT56 MIR3129-201ENST00000581095 76 ntBASIC-2.37□□□□□ -2.79
CHKB-CPT1BH3BT56 MIR6128-201ENST00000615528 109 ntBASIC-2.37□□□□□ -2.79
CHKB-CPT1BH3BT56 SNORA69.1-201ENST00000390904 137 ntBASIC-2.38□□□□□ -2.79
CHKB-CPT1BH3BT56 RNY4P36-201ENST00000391116 96 ntBASIC-2.38□□□□□ -2.79
CHKB-CPT1BH3BT56 RNU2-55P-201ENST00000411146 174 ntBASIC-2.38□□□□□ -2.79
CHKB-CPT1BH3BT56 AL009048.1-201ENST00000450437 298 ntBASIC-2.38□□□□□ -2.79
CHKB-CPT1BH3BT56 HAR1A.1-201ENST00000459583 118 ntBASIC-2.38□□□□□ -2.79
CHKB-CPT1BH3BT56 RNU6-1299P-201ENST00000516316 100 ntBASIC-2.38□□□□□ -2.79
CHKB-CPT1BH3BT56 AC144568.1-201ENST00000520139 137 ntBASIC-2.38□□□□□ -2.79
CHKB-CPT1BH3BT56 MIR335-201ENST00000362173 94 ntBASIC-2.39□□□□□ -2.79
CHKB-CPT1BH3BT56 Y_RNA.65-201ENST00000362846 100 ntBASIC-2.39□□□□□ -2.79
CHKB-CPT1BH3BT56 Y_RNA.328-201ENST00000365208 113 ntBASIC-2.39□□□□□ -2.79
CHKB-CPT1BH3BT56 Y_RNA.383-201ENST00000383855 97 ntBASIC-2.39□□□□□ -2.79
CHKB-CPT1BH3BT56 MIR206-201ENST00000384872 86 ntBASIC-2.39□□□□□ -2.79
CHKB-CPT1BH3BT56 MIR122-201ENST00000385044 85 ntBASIC-2.39□□□□□ -2.79
CHKB-CPT1BH3BT56 RNU6-763P-201ENST00000390865 106 ntBASIC-2.39□□□□□ -2.79
CHKB-CPT1BH3BT56 RNU6-1156P-201ENST00000410365 100 ntBASIC-2.39□□□□□ -2.79
CHKB-CPT1BH3BT56 MIR1270-201ENST00000459320 83 ntBASIC-2.39□□□□□ -2.79
CHKB-CPT1BH3BT56 RNU6-850P-201ENST00000516934 103 ntBASIC-2.39□□□□□ -2.79
CHKB-CPT1BH3BT56 RNA5SP26-201ENST00000362406 119 ntBASIC-2.4□□□□□ -2.79
CHKB-CPT1BH3BT56 Y_RNA.169-201ENST00000363745 96 ntBASIC-2.4□□□□□ -2.79
CHKB-CPT1BH3BT56 Y_RNA.180-201ENST00000363867 113 ntBASIC-2.4□□□□□ -2.79
CHKB-CPT1BH3BT56 RNU6-164P-201ENST00000364604 103 ntBASIC-2.4□□□□□ -2.79
CHKB-CPT1BH3BT56 RNU5E-4P-201ENST00000364931 120 ntBASIC-2.4□□□□□ -2.79
CHKB-CPT1BH3BT56 RNU6-54P-201ENST00000365563 107 ntBASIC-2.4□□□□□ -2.79
Retrieved 100 of 98,524 protein–RNA pairs in 231.5 ms