Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 SNORA26.6-201ENST00000391256 115 ntBASIC-1.82□□□□□ -2.7
COL6A5A8TX70 MIR3941-201ENST00000582572 103 ntBASIC-1.82□□□□□ -2.7
COL6A5A8TX70 AL607023.1-201ENST00000620045 248 ntBASIC-1.82□□□□□ -2.7
COL6A5A8TX70 U6.96-201ENST00000636425 70 ntBASIC-1.82□□□□□ -2.7
COL6A5A8TX70 MIR203A-201ENST00000384836 110 ntBASIC-1.82□□□□□ -2.7
COL6A5A8TX70 MIR656-201ENST00000385224 78 ntBASIC-1.82□□□□□ -2.7
COL6A5A8TX70 RNU6-1000P-201ENST00000391066 106 ntBASIC-1.82□□□□□ -2.7
COL6A5A8TX70 SNORD77.3-201ENST00000391113 65 ntBASIC-1.82□□□□□ -2.7
COL6A5A8TX70 AL161932.1-201ENST00000437408 146 ntBASIC-1.82□□□□□ -2.7
COL6A5A8TX70 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-1.82□□□□□ -2.7
COL6A5A8TX70 AC107399.1-201ENST00000451226 265 ntBASIC-1.82□□□□□ -2.7
COL6A5A8TX70 RNU7-154P-201ENST00000516194 62 ntBASIC-1.82□□□□□ -2.7
COL6A5A8TX70 AL138825.1-201ENST00000618587 192 ntBASIC-1.82□□□□□ -2.7
COL6A5A8TX70 AC099654.12-201ENST00000639868 649 ntBASIC-1.82□□□□□ -2.7
COL6A5A8TX70 Y_RNA.404-201ENST00000383978 102 ntBASIC-1.83□□□□□ -2.7
COL6A5A8TX70 SNORA27-201ENST00000384323 126 ntBASIC-1.83□□□□□ -2.7
COL6A5A8TX70 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.83□□□□□ -2.7
COL6A5A8TX70 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.83□□□□□ -2.7
COL6A5A8TX70 MIR4293-201ENST00000584305 78 ntBASIC-1.83□□□□□ -2.7
COL6A5A8TX70 RNU6-117P-201ENST00000365415 107 ntBASIC-1.83□□□□□ -2.7
COL6A5A8TX70 Y_RNA.415-201ENST00000384012 112 ntBASIC-1.83□□□□□ -2.7
COL6A5A8TX70 RNA5SP147-201ENST00000516493 109 ntBASIC-1.83□□□□□ -2.7
COL6A5A8TX70 AC004467.1-201ENST00000615678 330 ntBASIC-1.83□□□□□ -2.7
COL6A5A8TX70 SNORA20B-201ENST00000384220 132 ntBASIC-1.84□□□□□ -2.7
COL6A5A8TX70 RNU6-692P-201ENST00000384496 107 ntBASIC-1.84□□□□□ -2.7
COL6A5A8TX70 Y_RNA.621-201ENST00000411065 96 ntBASIC-1.84□□□□□ -2.7
COL6A5A8TX70 TPTE2P1-204ENST00000435256 593 ntBASIC-1.84□□□□□ -2.7
COL6A5A8TX70 AC079140.5-201ENST00000507882 310 ntBASIC-1.84□□□□□ -2.7
COL6A5A8TX70 RNU6-677P-201ENST00000516914 101 ntBASIC-1.84□□□□□ -2.7
COL6A5A8TX70 MIR548O2-201ENST00000616090 70 ntBASIC-1.84□□□□□ -2.7
COL6A5A8TX70 AL445264.1-201ENST00000621719 171 ntBASIC-1.84□□□□□ -2.7
COL6A5A8TX70 RNU6-832P-201ENST00000363319 107 ntBASIC-1.84□□□□□ -2.7
COL6A5A8TX70 RNU6-282P-201ENST00000365357 103 ntBASIC-1.84□□□□□ -2.7
COL6A5A8TX70 RNU6-974P-201ENST00000384099 108 ntBASIC-1.84□□□□□ -2.7
COL6A5A8TX70 RNU6-788P-201ENST00000390967 104 ntBASIC-1.84□□□□□ -2.7
COL6A5A8TX70 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-1.84□□□□□ -2.7
COL6A5A8TX70 AL137792.2-201ENST00000443484 235 ntBASIC-1.84□□□□□ -2.7
COL6A5A8TX70 AC124864.2-201ENST00000624736 186 ntBASIC-1.84□□□□□ -2.7
COL6A5A8TX70 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC-1.85□□□□□ -2.7
COL6A5A8TX70 EIF1P2-201ENST00000428233 350 ntBASIC-1.85□□□□□ -2.7
COL6A5A8TX70 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-1.85□□□□□ -2.7
COL6A5A8TX70 RNU6-822P-201ENST00000362707 106 ntBASIC-1.85□□□□□ -2.71
COL6A5A8TX70 RNU6-1120P-201ENST00000362988 108 ntBASIC-1.85□□□□□ -2.71
COL6A5A8TX70 SNORD63B-201ENST00000411005 70 ntBASIC-1.85□□□□□ -2.71
COL6A5A8TX70 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.86□□□□□ -2.71
COL6A5A8TX70 SNORD42B-201ENST00000458893 67 ntBASIC-1.86□□□□□ -2.71
COL6A5A8TX70 SNORD63.2-201ENST00000516303 64 ntBASIC-1.86□□□□□ -2.71
COL6A5A8TX70 RNU6-68P-201ENST00000516576 104 ntBASIC-1.86□□□□□ -2.71
COL6A5A8TX70 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.86□□□□□ -2.71
COL6A5A8TX70 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.86□□□□□ -2.71
COL6A5A8TX70 RNU7-25P-201ENST00000516544 62 ntBASIC-1.86□□□□□ -2.71
COL6A5A8TX70 RNU6-524P-201ENST00000384270 107 ntBASIC-1.87□□□□□ -2.71
COL6A5A8TX70 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-1.87□□□□□ -2.71
COL6A5A8TX70 RNU6-523P-201ENST00000516304 54 ntBASIC-1.87□□□□□ -2.71
COL6A5A8TX70 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.87□□□□□ -2.71
COL6A5A8TX70 MIR342-201ENST00000362212 99 ntBASIC-1.87□□□□□ -2.71
COL6A5A8TX70 RNU6-990P-201ENST00000364385 104 ntBASIC-1.87□□□□□ -2.71
COL6A5A8TX70 Y_RNA.260-201ENST00000364628 101 ntBASIC-1.87□□□□□ -2.71
COL6A5A8TX70 SNORD87-201ENST00000364849 89 ntBASIC-1.87□□□□□ -2.71
COL6A5A8TX70 SNORA40.5-201ENST00000391061 128 ntBASIC-1.87□□□□□ -2.71
COL6A5A8TX70 RNU6-159P-201ENST00000391080 106 ntBASIC-1.87□□□□□ -2.71
COL6A5A8TX70 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.87□□□□□ -2.71
COL6A5A8TX70 AC022616.4-201ENST00000522985 181 ntBASIC-1.87□□□□□ -2.71
COL6A5A8TX70 RNU6-247P-201ENST00000362636 107 ntBASIC-1.87□□□□□ -2.71
COL6A5A8TX70 SNORD60-201ENST00000383903 83 ntBASIC-1.87□□□□□ -2.71
COL6A5A8TX70 MIR578-201ENST00000384828 96 ntBASIC-1.87□□□□□ -2.71
COL6A5A8TX70 RNU6-651P-201ENST00000411040 105 ntBASIC-1.87□□□□□ -2.71
COL6A5A8TX70 MIR4500-201ENST00000579472 76 ntBASIC-1.87□□□□□ -2.71
COL6A5A8TX70 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-1.87□□□□□ -2.71
COL6A5A8TX70 Y_RNA.22-201ENST00000362492 102 ntBASIC-1.88□□□□□ -2.71
COL6A5A8TX70 AC090425.1-201ENST00000610007 140 ntBASIC-1.88□□□□□ -2.71
COL6A5A8TX70 U6.100-201ENST00000636230 99 ntBASIC-1.88□□□□□ -2.71
COL6A5A8TX70 SNORA20.2-201ENST00000383922 131 ntBASIC-1.88□□□□□ -2.71
COL6A5A8TX70 RNU6-310P-201ENST00000384655 107 ntBASIC-1.88□□□□□ -2.71
COL6A5A8TX70 RNY3P8-201ENST00000411366 126 ntBASIC-1.88□□□□□ -2.71
COL6A5A8TX70 RNU7-96P-201ENST00000459535 64 ntBASIC-1.88□□□□□ -2.71
COL6A5A8TX70 Y_RNA.689-201ENST00000516589 107 ntBASIC-1.88□□□□□ -2.71
COL6A5A8TX70 VN1R91P-201ENST00000594377 169 ntBASIC-1.88□□□□□ -2.71
COL6A5A8TX70 SNORD11B-201ENST00000607707 90 ntBASIC-1.88□□□□□ -2.71
COL6A5A8TX70 AC098479.1-201ENST00000609225 154 ntBASIC-1.88□□□□□ -2.71
COL6A5A8TX70 AC084781.2-201ENST00000615568 161 ntBASIC-1.88□□□□□ -2.71
COL6A5A8TX70 Y_RNA.101-201ENST00000363154 102 ntBASIC-1.89□□□□□ -2.71
COL6A5A8TX70 SNORA63-201ENST00000363450 132 ntBASIC-1.89□□□□□ -2.71
COL6A5A8TX70 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.89□□□□□ -2.71
COL6A5A8TX70 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.89□□□□□ -2.71
COL6A5A8TX70 RNU7-151P-201ENST00000516930 53 ntBASIC-1.89□□□□□ -2.71
COL6A5A8TX70 SNORA27.2-201ENST00000363365 126 ntBASIC-1.89□□□□□ -2.71
COL6A5A8TX70 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.89□□□□□ -2.71
COL6A5A8TX70 AL391262.2-201ENST00000622466 494 ntBASIC-1.89□□□□□ -2.71
COL6A5A8TX70 SNORA43.4-201ENST00000629559 138 ntBASIC-1.89□□□□□ -2.71
COL6A5A8TX70 MIR302B-201ENST00000362188 73 ntBASIC-1.9□□□□□ -2.71
COL6A5A8TX70 RNU6-960P-201ENST00000364056 120 ntBASIC-1.9□□□□□ -2.71
COL6A5A8TX70 RNU6-643P-201ENST00000384018 107 ntBASIC-1.9□□□□□ -2.71
COL6A5A8TX70 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.9□□□□□ -2.71
COL6A5A8TX70 MIR320B2-201ENST00000408479 138 ntBASIC-1.9□□□□□ -2.71
COL6A5A8TX70 AC108729.2-201ENST00000476543 840 ntBASIC-1.9□□□□□ -2.71
COL6A5A8TX70 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.9□□□□□ -2.71
COL6A5A8TX70 RNU6-361P-201ENST00000364454 107 ntBASIC-1.9□□□□□ -2.71
COL6A5A8TX70 MIR1270-201ENST00000459320 83 ntBASIC-1.9□□□□□ -2.71
COL6A5A8TX70 MIR3684-201ENST00000579779 74 ntBASIC-1.9□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 223.6 ms