Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.58□□□□□ -2.5
RBFOX3A6NFN3 AL731563.1-201ENST00000442202 214 ntBASIC-0.58□□□□□ -2.5
RBFOX3A6NFN3 MTND4P19-201ENST00000446659 478 ntBASIC-0.58□□□□□ -2.5
RBFOX3A6NFN3 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.58□□□□□ -2.5
RBFOX3A6NFN3 RNU6-507P-201ENST00000516045 100 ntBASIC-0.58□□□□□ -2.5
RBFOX3A6NFN3 AL008718.3-201ENST00000610217 321 ntBASIC-0.58□□□□□ -2.5
RBFOX3A6NFN3 Y_RNA.5-201ENST00000362334 102 ntBASIC-0.59□□□□□ -2.5
RBFOX3A6NFN3 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.59□□□□□ -2.5
RBFOX3A6NFN3 Y_RNA.80-201ENST00000362996 102 ntBASIC-0.59□□□□□ -2.5
RBFOX3A6NFN3 RNU4-10P-201ENST00000364383 140 ntBASIC-0.59□□□□□ -2.5
RBFOX3A6NFN3 Y_RNA.384-201ENST00000383909 102 ntBASIC-0.59□□□□□ -2.5
RBFOX3A6NFN3 Y_RNA.390-201ENST00000383932 102 ntBASIC-0.59□□□□□ -2.5
RBFOX3A6NFN3 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.59□□□□□ -2.5
RBFOX3A6NFN3 Y_RNA.485-201ENST00000384395 102 ntBASIC-0.59□□□□□ -2.5
RBFOX3A6NFN3 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.59□□□□□ -2.5
RBFOX3A6NFN3 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.59□□□□□ -2.5
RBFOX3A6NFN3 RNU6-976P-201ENST00000516086 111 ntBASIC-0.59□□□□□ -2.5
RBFOX3A6NFN3 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.59□□□□□ -2.5
RBFOX3A6NFN3 MIR4436A-201ENST00000585278 85 ntBASIC-0.59□□□□□ -2.5
RBFOX3A6NFN3 AC084781.2-201ENST00000615568 161 ntBASIC-0.59□□□□□ -2.5
RBFOX3A6NFN3 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.6□□□□□ -2.51
RBFOX3A6NFN3 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.6□□□□□ -2.51
RBFOX3A6NFN3 RNU6-290P-201ENST00000365212 101 ntBASIC-0.6□□□□□ -2.51
RBFOX3A6NFN3 SNORD75.1-201ENST00000408373 60 ntBASIC-0.6□□□□□ -2.51
RBFOX3A6NFN3 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.6□□□□□ -2.51
RBFOX3A6NFN3 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.6□□□□□ -2.51
RBFOX3A6NFN3 RNU6-893P-201ENST00000458841 100 ntBASIC-0.6□□□□□ -2.51
RBFOX3A6NFN3 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.6□□□□□ -2.51
RBFOX3A6NFN3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.6□□□□□ -2.51
RBFOX3A6NFN3 U6.109-201ENST00000636749 87 ntBASIC-0.6□□□□□ -2.51
RBFOX3A6NFN3 MTND5P32-201ENST00000560711 1802 ntBASIC-0.61□□□□□ -2.51
RBFOX3A6NFN3 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.61□□□□□ -2.51
RBFOX3A6NFN3 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.61□□□□□ -2.51
RBFOX3A6NFN3 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.61□□□□□ -2.51
RBFOX3A6NFN3 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.61□□□□□ -2.51
RBFOX3A6NFN3 SNORA63.7-201ENST00000365579 123 ntBASIC-0.61□□□□□ -2.51
RBFOX3A6NFN3 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.61□□□□□ -2.51
RBFOX3A6NFN3 RNU6-662P-201ENST00000384253 104 ntBASIC-0.61□□□□□ -2.51
RBFOX3A6NFN3 RNA5SP25-201ENST00000410815 110 ntBASIC-0.61□□□□□ -2.51
RBFOX3A6NFN3 RNU7-188P-201ENST00000517063 64 ntBASIC-0.61□□□□□ -2.51
RBFOX3A6NFN3 SNORA25.1-201ENST00000362326 128 ntBASIC-0.62□□□□□ -2.51
RBFOX3A6NFN3 RNY4P3-201ENST00000365254 95 ntBASIC-0.62□□□□□ -2.51
RBFOX3A6NFN3 RNU6-326P-201ENST00000365480 107 ntBASIC-0.62□□□□□ -2.51
RBFOX3A6NFN3 SNORA3B-201ENST00000391305 131 ntBASIC-0.62□□□□□ -2.51
RBFOX3A6NFN3 MIR1302-11-201ENST00000408051 138 ntBASIC-0.62□□□□□ -2.51
RBFOX3A6NFN3 MIR1302-9-201ENST00000408365 138 ntBASIC-0.62□□□□□ -2.51
RBFOX3A6NFN3 MIR1302-10-201ENST00000408734 138 ntBASIC-0.62□□□□□ -2.51
RBFOX3A6NFN3 RNU6-735P-201ENST00000410612 107 ntBASIC-0.62□□□□□ -2.51
RBFOX3A6NFN3 SNRPGP8-201ENST00000454064 226 ntBASIC-0.62□□□□□ -2.51
RBFOX3A6NFN3 RNU7-79P-201ENST00000516082 62 ntBASIC-0.62□□□□□ -2.51
RBFOX3A6NFN3 RNA5SP66-201ENST00000517178 101 ntBASIC-0.62□□□□□ -2.51
RBFOX3A6NFN3 RNA5SP169-201ENST00000517268 117 ntBASIC-0.62□□□□□ -2.51
RBFOX3A6NFN3 MIR3129-201ENST00000581095 76 ntBASIC-0.62□□□□□ -2.51
RBFOX3A6NFN3 AC096720.1-201ENST00000604441 183 ntBASIC-0.62□□□□□ -2.51
RBFOX3A6NFN3 MIR1302-2-201ENST00000607096 138 ntBASIC-0.62□□□□□ -2.51
RBFOX3A6NFN3 snoU18.1-201ENST00000629629 71 ntBASIC-0.62□□□□□ -2.51
RBFOX3A6NFN3 RNU6-509P-201ENST00000363519 107 ntBASIC-0.63□□□□□ -2.51
RBFOX3A6NFN3 SNORD95.1-201ENST00000364099 68 ntBASIC-0.63□□□□□ -2.51
RBFOX3A6NFN3 RNY1P2-201ENST00000364820 117 ntBASIC-0.63□□□□□ -2.51
RBFOX3A6NFN3 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.63□□□□□ -2.51
RBFOX3A6NFN3 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.63□□□□□ -2.51
RBFOX3A6NFN3 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.63□□□□□ -2.51
RBFOX3A6NFN3 SNORA27.4-201ENST00000516650 95 ntBASIC-0.63□□□□□ -2.51
RBFOX3A6NFN3 RNU7-35P-201ENST00000517174 62 ntBASIC-0.63□□□□□ -2.51
RBFOX3A6NFN3 MIR4473-201ENST00000583731 91 ntBASIC-0.63□□□□□ -2.51
RBFOX3A6NFN3 AC037487.3-201ENST00000606668 112 ntBASIC-0.63□□□□□ -2.51
RBFOX3A6NFN3 MIR1302-1-201ENST00000637932 143 ntBASIC-0.63□□□□□ -2.51
RBFOX3A6NFN3 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.64□□□□□ -2.51
RBFOX3A6NFN3 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.64□□□□□ -2.51
RBFOX3A6NFN3 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.64□□□□□ -2.51
RBFOX3A6NFN3 SNORA53-201ENST00000391141 249 ntBASIC-0.64□□□□□ -2.51
RBFOX3A6NFN3 AC098614.3-201ENST00000438957 440 ntBASIC-0.64□□□□□ -2.51
RBFOX3A6NFN3 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.64□□□□□ -2.51
RBFOX3A6NFN3 RNU7-70P-201ENST00000516941 66 ntBASIC-0.64□□□□□ -2.51
RBFOX3A6NFN3 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.64□□□□□ -2.51
RBFOX3A6NFN3 AL365205.2-201ENST00000594586 68 ntBASIC-0.64□□□□□ -2.51
RBFOX3A6NFN3 AC112487.2-201ENST00000637950 304 ntBASIC-0.64□□□□□ -2.51
RBFOX3A6NFN3 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.65□□□□□ -2.51
RBFOX3A6NFN3 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.65□□□□□ -2.51
RBFOX3A6NFN3 RNU6-30P-201ENST00000384561 107 ntBASIC-0.65□□□□□ -2.51
RBFOX3A6NFN3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.65□□□□□ -2.51
RBFOX3A6NFN3 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.65□□□□□ -2.51
RBFOX3A6NFN3 SNORD19B-201ENST00000459623 84 ntBASIC-0.65□□□□□ -2.51
RBFOX3A6NFN3 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.65□□□□□ -2.51
RBFOX3A6NFN3 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-0.65□□□□□ -2.51
RBFOX3A6NFN3 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-0.65□□□□□ -2.51
RBFOX3A6NFN3 AC090574.1-201ENST00000623186 233 ntBASIC-0.65□□□□□ -2.51
RBFOX3A6NFN3 UBE2WP1-201ENST00000362030 340 ntBASIC-0.66□□□□□ -2.52
RBFOX3A6NFN3 Y_RNA.70-201ENST00000362886 110 ntBASIC-0.66□□□□□ -2.52
RBFOX3A6NFN3 RNU4-16P-201ENST00000364737 141 ntBASIC-0.66□□□□□ -2.52
RBFOX3A6NFN3 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.66□□□□□ -2.52
RBFOX3A6NFN3 RNU4-70P-201ENST00000384579 139 ntBASIC-0.66□□□□□ -2.52
RBFOX3A6NFN3 RNU6-455P-201ENST00000384681 107 ntBASIC-0.66□□□□□ -2.52
RBFOX3A6NFN3 MIR599-201ENST00000385069 95 ntBASIC-0.66□□□□□ -2.52
RBFOX3A6NFN3 snoU13.19-201ENST00000459148 104 ntBASIC-0.66□□□□□ -2.52
RBFOX3A6NFN3 Y_RNA.632-201ENST00000459189 102 ntBASIC-0.66□□□□□ -2.52
RBFOX3A6NFN3 TRAJ51-201ENST00000504127 63 ntBASIC-0.66□□□□□ -2.52
RBFOX3A6NFN3 RNA5SP476-201ENST00000516613 103 ntBASIC-0.66□□□□□ -2.52
RBFOX3A6NFN3 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.66□□□□□ -2.52
RBFOX3A6NFN3 MIR548H5-201ENST00000580314 60 ntBASIC-0.66□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 242.9 ms