Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.99□□□□□ -2.25
TCRBV7S3A2A0A539 SNORD83.1-201ENST00000411362 77 ntBASIC0.99□□□□□ -2.25
TCRBV7S3A2A0A539 AC067940.1-201ENST00000458411 300 ntBASIC0.99□□□□□ -2.25
TCRBV7S3A2A0A539 RNU7-79P-201ENST00000516082 62 ntBASIC0.99□□□□□ -2.25
TCRBV7S3A2A0A539 MIR3910-1-201ENST00000580936 111 ntBASIC0.99□□□□□ -2.25
TCRBV7S3A2A0A539 MIR6078-201ENST00000611069 100 ntBASIC0.99□□□□□ -2.25
TCRBV7S3A2A0A539 Y_RNA.71-201ENST00000362892 104 ntBASIC0.98□□□□□ -2.25
TCRBV7S3A2A0A539 Y_RNA.218-201ENST00000364218 104 ntBASIC0.98□□□□□ -2.25
TCRBV7S3A2A0A539 RNY1P13-201ENST00000365030 105 ntBASIC0.98□□□□□ -2.25
TCRBV7S3A2A0A539 MIR942-201ENST00000401111 86 ntBASIC0.98□□□□□ -2.25
TCRBV7S3A2A0A539 Y_RNA.712-201ENST00000517011 92 ntBASIC0.98□□□□□ -2.25
TCRBV7S3A2A0A539 AC022523.2-201ENST00000561045 150 ntBASIC0.98□□□□□ -2.25
TCRBV7S3A2A0A539 MIR4524B-201ENST00000581569 115 ntBASIC0.98□□□□□ -2.25
TCRBV7S3A2A0A539 MIR1-1-201ENST00000362147 71 ntBASIC0.97□□□□□ -2.25
TCRBV7S3A2A0A539 MIR1263-201ENST00000408324 86 ntBASIC0.97□□□□□ -2.25
TCRBV7S3A2A0A539 MIR1270-201ENST00000459320 83 ntBASIC0.97□□□□□ -2.25
TCRBV7S3A2A0A539 AC087343.1-201ENST00000477341 475 ntBASIC0.97□□□□□ -2.25
TCRBV7S3A2A0A539 RNU6-772P-201ENST00000516042 105 ntBASIC0.97□□□□□ -2.25
TCRBV7S3A2A0A539 RNA5SP255-201ENST00000516370 107 ntBASIC0.97□□□□□ -2.25
TCRBV7S3A2A0A539 AL136317.1-201ENST00000612653 226 ntBASIC0.97□□□□□ -2.25
TCRBV7S3A2A0A539 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
TCRBV7S3A2A0A539 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.96□□□□□ -2.26
TCRBV7S3A2A0A539 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
TCRBV7S3A2A0A539 Y_RNA.528-201ENST00000384575 108 ntBASIC0.96□□□□□ -2.26
TCRBV7S3A2A0A539 RNU7-185P-201ENST00000459215 60 ntBASIC0.96□□□□□ -2.26
TCRBV7S3A2A0A539 OR2A41P-201ENST00000473586 105 ntBASIC0.96□□□□□ -2.26
TCRBV7S3A2A0A539 RNU6-659P-201ENST00000516454 104 ntBASIC0.96□□□□□ -2.26
TCRBV7S3A2A0A539 MIR4771-2-201ENST00000577758 74 ntBASIC0.96□□□□□ -2.26
TCRBV7S3A2A0A539 MIR4771-1-201ENST00000582617 74 ntBASIC0.96□□□□□ -2.26
TCRBV7S3A2A0A539 AC020891.4-201ENST00000605745 93 ntBASIC0.96□□□□□ -2.26
TCRBV7S3A2A0A539 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.96□□□□□ -2.26
TCRBV7S3A2A0A539 AC025166.1-201ENST00000612411 163 ntBASIC0.96□□□□□ -2.26
TCRBV7S3A2A0A539 AC132825.6-201ENST00000638861 357 ntBASIC0.96□□□□□ -2.26
TCRBV7S3A2A0A539 Y_RNA.213-201ENST00000364178 111 ntBASIC0.95□□□□□ -2.26
TCRBV7S3A2A0A539 SNORD113-1-201ENST00000365321 69 ntBASIC0.95□□□□□ -2.26
TCRBV7S3A2A0A539 SNORD116-14-201ENST00000383894 92 ntBASIC0.95□□□□□ -2.26
TCRBV7S3A2A0A539 SNORA22-201ENST00000383907 134 ntBASIC0.95□□□□□ -2.26
TCRBV7S3A2A0A539 SNORD116-17-201ENST00000383929 92 ntBASIC0.95□□□□□ -2.26
TCRBV7S3A2A0A539 SNORA32-201ENST00000384072 121 ntBASIC0.95□□□□□ -2.26
TCRBV7S3A2A0A539 SNORD116-15-201ENST00000384445 92 ntBASIC0.95□□□□□ -2.26
TCRBV7S3A2A0A539 SNORA22C-201ENST00000384614 134 ntBASIC0.95□□□□□ -2.26
TCRBV7S3A2A0A539 SNORD116-19-201ENST00000384729 92 ntBASIC0.95□□□□□ -2.26
TCRBV7S3A2A0A539 MT-TI-201ENST00000387365 69 ntBASIC0.95□□□□□ -2.26
TCRBV7S3A2A0A539 U8.15-201ENST00000390947 134 ntBASIC0.95□□□□□ -2.26
TCRBV7S3A2A0A539 RNU7-107P-201ENST00000459121 61 ntBASIC0.95□□□□□ -2.26
TCRBV7S3A2A0A539 RNU6-1061P-201ENST00000516530 99 ntBASIC0.95□□□□□ -2.26
TCRBV7S3A2A0A539 RNU6-1234P-201ENST00000516877 103 ntBASIC0.95□□□□□ -2.26
TCRBV7S3A2A0A539 MIR3163-201ENST00000581592 73 ntBASIC0.95□□□□□ -2.26
TCRBV7S3A2A0A539 AC025627.3-201ENST00000582078 182 ntBASIC0.95□□□□□ -2.26
TCRBV7S3A2A0A539 MIR4676-201ENST00000583078 72 ntBASIC0.95□□□□□ -2.26
TCRBV7S3A2A0A539 Y_RNA.346-201ENST00000365385 112 ntBASIC0.94□□□□□ -2.26
TCRBV7S3A2A0A539 MIR125B2-201ENST00000385128 89 ntBASIC0.94□□□□□ -2.26
TCRBV7S3A2A0A539 MIR100-201ENST00000385259 80 ntBASIC0.94□□□□□ -2.26
TCRBV7S3A2A0A539 RNU6-482P-201ENST00000391068 107 ntBASIC0.94□□□□□ -2.26
TCRBV7S3A2A0A539 AC096949.1-201ENST00000412047 152 ntBASIC0.94□□□□□ -2.26
TCRBV7S3A2A0A539 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.94□□□□□ -2.26
TCRBV7S3A2A0A539 MIR4661-201ENST00000582720 75 ntBASIC0.94□□□□□ -2.26
TCRBV7S3A2A0A539 MIR6715A-201ENST00000615929 79 ntBASIC0.94□□□□□ -2.26
TCRBV7S3A2A0A539 MIR3914-2-201ENST00000637339 95 ntBASIC0.94□□□□□ -2.26
TCRBV7S3A2A0A539 AC023934.1-201ENST00000574529 2389 ntBASIC0.94□□□□□ -2.26
TCRBV7S3A2A0A539 MTND5P18-201ENST00000445624 1801 ntBASIC0.94□□□□□ -2.26
TCRBV7S3A2A0A539 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
TCRBV7S3A2A0A539 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
TCRBV7S3A2A0A539 AL157777.2-201ENST00000258070 137 ntBASIC0.93□□□□□ -2.26
TCRBV7S3A2A0A539 Y_RNA.127-201ENST00000363386 109 ntBASIC0.93□□□□□ -2.26
TCRBV7S3A2A0A539 SNORD114-10-201ENST00000363409 72 ntBASIC0.93□□□□□ -2.26
TCRBV7S3A2A0A539 RNU1-36P-201ENST00000365130 165 ntBASIC0.93□□□□□ -2.26
TCRBV7S3A2A0A539 Y_RNA.327-201ENST00000365201 102 ntBASIC0.93□□□□□ -2.26
TCRBV7S3A2A0A539 MIR759-201ENST00000390224 91 ntBASIC0.93□□□□□ -2.26
TCRBV7S3A2A0A539 SNORD89-201ENST00000390981 114 ntBASIC0.93□□□□□ -2.26
TCRBV7S3A2A0A539 SNORD77B-201ENST00000391112 67 ntBASIC0.93□□□□□ -2.26
TCRBV7S3A2A0A539 MIR1257-201ENST00000408490 117 ntBASIC0.93□□□□□ -2.26
TCRBV7S3A2A0A539 Y_RNA.630-201ENST00000411370 108 ntBASIC0.93□□□□□ -2.26
TCRBV7S3A2A0A539 PDCD5P2-201ENST00000507570 312 ntBASIC0.93□□□□□ -2.26
TCRBV7S3A2A0A539 UBL5P1-201ENST00000507979 193 ntBASIC0.93□□□□□ -2.26
TCRBV7S3A2A0A539 MIR4804-201ENST00000581683 73 ntBASIC0.93□□□□□ -2.26
TCRBV7S3A2A0A539 AC087741.2-201ENST00000619415 172 ntBASIC0.93□□□□□ -2.26
TCRBV7S3A2A0A539 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
TCRBV7S3A2A0A539 SNORD115-19-201ENST00000363098 82 ntBASIC0.92□□□□□ -2.26
TCRBV7S3A2A0A539 SNORD115-18-201ENST00000363293 82 ntBASIC0.92□□□□□ -2.26
TCRBV7S3A2A0A539 SNORD115-17-201ENST00000364612 82 ntBASIC0.92□□□□□ -2.26
TCRBV7S3A2A0A539 RNU7-56P-201ENST00000458744 62 ntBASIC0.92□□□□□ -2.26
TCRBV7S3A2A0A539 RNU6-977P-201ENST00000516411 103 ntBASIC0.92□□□□□ -2.26
TCRBV7S3A2A0A539 RNU7-137P-201ENST00000516788 62 ntBASIC0.92□□□□□ -2.26
TCRBV7S3A2A0A539 RNU6-789P-201ENST00000517105 102 ntBASIC0.92□□□□□ -2.26
TCRBV7S3A2A0A539 Y_RNA.563-201ENST00000384707 108 ntBASIC0.91□□□□□ -2.26
TCRBV7S3A2A0A539 MIR938-201ENST00000401216 83 ntBASIC0.91□□□□□ -2.26
TCRBV7S3A2A0A539 SNORD93-201ENST00000408813 74 ntBASIC0.91□□□□□ -2.26
TCRBV7S3A2A0A539 AC015818.7-201ENST00000428754 109 ntBASIC0.91□□□□□ -2.26
TCRBV7S3A2A0A539 AC087499.7-201ENST00000441958 109 ntBASIC0.91□□□□□ -2.26
TCRBV7S3A2A0A539 RPL39P25-201ENST00000449384 154 ntBASIC0.91□□□□□ -2.26
TCRBV7S3A2A0A539 RNU6-406P-201ENST00000516470 107 ntBASIC0.91□□□□□ -2.26
TCRBV7S3A2A0A539 SNORD67.1-201ENST00000516618 108 ntBASIC0.91□□□□□ -2.26
TCRBV7S3A2A0A539 SNORD92-201ENST00000585078 85 ntBASIC0.91□□□□□ -2.26
TCRBV7S3A2A0A539 AL359881.1-201ENST00000602916 267 ntBASIC0.91□□□□□ -2.26
TCRBV7S3A2A0A539 FAM71BP1-201ENST00000604431 523 ntBASIC0.91□□□□□ -2.26
TCRBV7S3A2A0A539 RMST_2.1-201ENST00000617263 136 ntBASIC0.91□□□□□ -2.26
TCRBV7S3A2A0A539 Y_RNA.525-201ENST00000384570 113 ntBASIC0.9□□□□□ -2.27
TCRBV7S3A2A0A539 SNORD105-201ENST00000386910 85 ntBASIC0.9□□□□□ -2.27
TCRBV7S3A2A0A539 Y_RNA.588-201ENST00000391254 102 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 203.9 ms