Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC004941.2-201ENST00000427009 228 ntBASIC1.59□□□□□ -2.15
CCDC187A0A096LP49 RNU2-11P-201ENST00000459191 187 ntBASIC1.59□□□□□ -2.15
CCDC187A0A096LP49 RNU7-45P-201ENST00000459460 63 ntBASIC1.59□□□□□ -2.15
CCDC187A0A096LP49 RNA5SP395-201ENST00000516567 118 ntBASIC1.59□□□□□ -2.15
CCDC187A0A096LP49 RNU6-638P-201ENST00000516582 104 ntBASIC1.59□□□□□ -2.15
CCDC187A0A096LP49 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.59□□□□□ -2.15
CCDC187A0A096LP49 MIR548Z-201ENST00000584743 97 ntBASIC1.59□□□□□ -2.15
CCDC187A0A096LP49 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.59□□□□□ -2.15
CCDC187A0A096LP49 AC012531.4-201ENST00000616509 177 ntBASIC1.59□□□□□ -2.15
CCDC187A0A096LP49 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
CCDC187A0A096LP49 RNU6-170P-201ENST00000362832 104 ntBASIC1.58□□□□□ -2.16
CCDC187A0A096LP49 RNU4-36P-201ENST00000364294 144 ntBASIC1.58□□□□□ -2.16
CCDC187A0A096LP49 RNU4-67P-201ENST00000364569 141 ntBASIC1.58□□□□□ -2.16
CCDC187A0A096LP49 SNORA25.9-201ENST00000365087 128 ntBASIC1.58□□□□□ -2.16
CCDC187A0A096LP49 MIR605-201ENST00000385078 83 ntBASIC1.58□□□□□ -2.16
CCDC187A0A096LP49 RNU6-1319P-201ENST00000390855 104 ntBASIC1.58□□□□□ -2.16
CCDC187A0A096LP49 RNU6-747P-201ENST00000390928 104 ntBASIC1.58□□□□□ -2.16
CCDC187A0A096LP49 RNU6-241P-201ENST00000391148 104 ntBASIC1.58□□□□□ -2.16
CCDC187A0A096LP49 RNU6-177P-201ENST00000411257 104 ntBASIC1.58□□□□□ -2.16
CCDC187A0A096LP49 AC245517.4-201ENST00000448601 281 ntBASIC1.58□□□□□ -2.16
CCDC187A0A096LP49 RNA5SP445-201ENST00000515889 115 ntBASIC1.58□□□□□ -2.16
CCDC187A0A096LP49 Y_RNA.685-201ENST00000516532 108 ntBASIC1.58□□□□□ -2.16
CCDC187A0A096LP49 MIR342-201ENST00000362212 99 ntBASIC1.57□□□□□ -2.16
CCDC187A0A096LP49 Y_RNA.17-201ENST00000362433 111 ntBASIC1.57□□□□□ -2.16
CCDC187A0A096LP49 Y_RNA.377-201ENST00000365644 108 ntBASIC1.57□□□□□ -2.16
CCDC187A0A096LP49 Y_RNA.470-201ENST00000384307 117 ntBASIC1.57□□□□□ -2.16
CCDC187A0A096LP49 RNU6-1065P-201ENST00000384513 106 ntBASIC1.57□□□□□ -2.16
CCDC187A0A096LP49 RNU6-733P-201ENST00000410759 104 ntBASIC1.57□□□□□ -2.16
CCDC187A0A096LP49 AL022718.1-201ENST00000412004 84 ntBASIC1.57□□□□□ -2.16
CCDC187A0A096LP49 AC027119.1-201ENST00000440877 241 ntBASIC1.57□□□□□ -2.16
CCDC187A0A096LP49 AC009474.2-201ENST00000451383 136 ntBASIC1.57□□□□□ -2.16
CCDC187A0A096LP49 RNU7-61P-201ENST00000515897 61 ntBASIC1.57□□□□□ -2.16
CCDC187A0A096LP49 SNORA74.3-201ENST00000517108 154 ntBASIC1.57□□□□□ -2.16
CCDC187A0A096LP49 MIR4777-201ENST00000583710 86 ntBASIC1.57□□□□□ -2.16
CCDC187A0A096LP49 BX248123.2-201ENST00000606318 124 ntBASIC1.57□□□□□ -2.16
CCDC187A0A096LP49 AC091304.10-201ENST00000641554 121 ntBASIC1.57□□□□□ -2.16
CCDC187A0A096LP49 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CCDC187A0A096LP49 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.56□□□□□ -2.16
CCDC187A0A096LP49 MIR494-201ENST00000349529 81 ntBASIC1.56□□□□□ -2.16
CCDC187A0A096LP49 Y_RNA.507-201ENST00000384500 99 ntBASIC1.56□□□□□ -2.16
CCDC187A0A096LP49 RNU6-644P-201ENST00000391155 98 ntBASIC1.56□□□□□ -2.16
CCDC187A0A096LP49 RNU4-69P-201ENST00000410677 143 ntBASIC1.56□□□□□ -2.16
CCDC187A0A096LP49 RNU6-1190P-201ENST00000410811 104 ntBASIC1.56□□□□□ -2.16
CCDC187A0A096LP49 SNORD123-201ENST00000459473 70 ntBASIC1.56□□□□□ -2.16
CCDC187A0A096LP49 RNU6-795P-201ENST00000516323 103 ntBASIC1.56□□□□□ -2.16
CCDC187A0A096LP49 RNU6-922P-201ENST00000516753 99 ntBASIC1.56□□□□□ -2.16
CCDC187A0A096LP49 AC019176.1-201ENST00000518519 225 ntBASIC1.56□□□□□ -2.16
CCDC187A0A096LP49 MIR3937-201ENST00000580135 106 ntBASIC1.56□□□□□ -2.16
CCDC187A0A096LP49 Y_RNA.219-201ENST00000364232 113 ntBASIC1.55□□□□□ -2.16
CCDC187A0A096LP49 SNORA1.2-201ENST00000365189 134 ntBASIC1.55□□□□□ -2.16
CCDC187A0A096LP49 Y_RNA.430-201ENST00000384081 110 ntBASIC1.55□□□□□ -2.16
CCDC187A0A096LP49 RNU6-409P-201ENST00000384114 104 ntBASIC1.55□□□□□ -2.16
CCDC187A0A096LP49 RNU6-1201P-201ENST00000384227 107 ntBASIC1.55□□□□□ -2.16
CCDC187A0A096LP49 RNU6-616P-201ENST00000384353 107 ntBASIC1.55□□□□□ -2.16
CCDC187A0A096LP49 RNU6-913P-201ENST00000390913 95 ntBASIC1.55□□□□□ -2.16
CCDC187A0A096LP49 MIR548AE2-201ENST00000583456 67 ntBASIC1.55□□□□□ -2.16
CCDC187A0A096LP49 AL357312.1-201ENST00000603879 298 ntBASIC1.55□□□□□ -2.16
CCDC187A0A096LP49 FAM71BP1-201ENST00000604431 523 ntBASIC1.55□□□□□ -2.16
CCDC187A0A096LP49 AL020996.3-201ENST00000606617 222 ntBASIC1.55□□□□□ -2.16
CCDC187A0A096LP49 U7.3-201ENST00000616123 62 ntBASIC1.55□□□□□ -2.16
CCDC187A0A096LP49 MIR7111-201ENST00000619751 72 ntBASIC1.55□□□□□ -2.16
CCDC187A0A096LP49 Y_RNA.10-201ENST00000362371 110 ntBASIC1.54□□□□□ -2.16
CCDC187A0A096LP49 SNORA22.1-201ENST00000362701 134 ntBASIC1.54□□□□□ -2.16
CCDC187A0A096LP49 RNU1-42P-201ENST00000364033 160 ntBASIC1.54□□□□□ -2.16
CCDC187A0A096LP49 RNU6-60P-201ENST00000364792 103 ntBASIC1.54□□□□□ -2.16
CCDC187A0A096LP49 Y_RNA.299-201ENST00000364973 94 ntBASIC1.54□□□□□ -2.16
CCDC187A0A096LP49 RNU6-675P-201ENST00000384236 104 ntBASIC1.54□□□□□ -2.16
CCDC187A0A096LP49 SNORD41-201ENST00000386967 70 ntBASIC1.54□□□□□ -2.16
CCDC187A0A096LP49 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.54□□□□□ -2.16
CCDC187A0A096LP49 SNORD78.1-201ENST00000390866 65 ntBASIC1.54□□□□□ -2.16
CCDC187A0A096LP49 SNORD28B-201ENST00000390993 75 ntBASIC1.54□□□□□ -2.16
CCDC187A0A096LP49 SNORA67.6-201ENST00000391093 99 ntBASIC1.54□□□□□ -2.16
CCDC187A0A096LP49 RNU7-73P-201ENST00000458743 63 ntBASIC1.54□□□□□ -2.16
CCDC187A0A096LP49 RNU6-1018P-201ENST00000516577 106 ntBASIC1.54□□□□□ -2.16
CCDC187A0A096LP49 RNU6-902P-201ENST00000517212 91 ntBASIC1.54□□□□□ -2.16
CCDC187A0A096LP49 AL645939.4-201ENST00000604495 135 ntBASIC1.54□□□□□ -2.16
CCDC187A0A096LP49 GHRLOS.1-201ENST00000610995 70 ntBASIC1.54□□□□□ -2.16
CCDC187A0A096LP49 Y_RNA.155-201ENST00000363632 101 ntBASIC1.53□□□□□ -2.16
CCDC187A0A096LP49 RNU6-1134P-201ENST00000365156 101 ntBASIC1.53□□□□□ -2.16
CCDC187A0A096LP49 Y_RNA.327-201ENST00000365201 102 ntBASIC1.53□□□□□ -2.16
CCDC187A0A096LP49 RNU6-497P-201ENST00000365316 104 ntBASIC1.53□□□□□ -2.16
CCDC187A0A096LP49 RPS29P29-201ENST00000456396 171 ntBASIC1.53□□□□□ -2.16
CCDC187A0A096LP49 RNU7-113P-201ENST00000459273 62 ntBASIC1.53□□□□□ -2.16
CCDC187A0A096LP49 RPL30P7-201ENST00000479312 323 ntBASIC1.53□□□□□ -2.16
CCDC187A0A096LP49 RNU7-43P-201ENST00000516554 64 ntBASIC1.53□□□□□ -2.16
CCDC187A0A096LP49 RNU6-1006P-201ENST00000516998 103 ntBASIC1.53□□□□□ -2.16
CCDC187A0A096LP49 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.53□□□□□ -2.16
CCDC187A0A096LP49 MIR548AR-201ENST00000582191 57 ntBASIC1.53□□□□□ -2.16
CCDC187A0A096LP49 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.53□□□□□ -2.16
CCDC187A0A096LP49 MIR6717-201ENST00000622747 73 ntBASIC1.53□□□□□ -2.16
CCDC187A0A096LP49 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.53□□□□□ -2.16
CCDC187A0A096LP49 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.52□□□□□ -2.17
CCDC187A0A096LP49 RNU6-1313P-201ENST00000362622 102 ntBASIC1.52□□□□□ -2.17
CCDC187A0A096LP49 RNU6-228P-201ENST00000362700 106 ntBASIC1.52□□□□□ -2.17
CCDC187A0A096LP49 SNORD48-201ENST00000364953 64 ntBASIC1.52□□□□□ -2.17
CCDC187A0A096LP49 SNORD115-35-201ENST00000365122 82 ntBASIC1.52□□□□□ -2.17
CCDC187A0A096LP49 Y_RNA.370-201ENST00000365589 108 ntBASIC1.52□□□□□ -2.17
CCDC187A0A096LP49 Y_RNA.508-201ENST00000384502 114 ntBASIC1.52□□□□□ -2.17
CCDC187A0A096LP49 MIR517C-201ENST00000385103 95 ntBASIC1.52□□□□□ -2.17
CCDC187A0A096LP49 SNORA7.5-201ENST00000410672 110 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 195.1 ms