Protein–RNA interactions for Protein: Q9Y2K2

SIK3, Serine/threonine-protein kinase SIK3, humanhuman

Predictions only

Length 1,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3Q9Y2K2 MIR548A1-201ENST00000385041 97 ntBASIC1.59□□□□□ -2.15
SIK3Q9Y2K2 MIR517C-201ENST00000385103 95 ntBASIC1.59□□□□□ -2.15
SIK3Q9Y2K2 MTATP6P29-201ENST00000415057 132 ntBASIC1.59□□□□□ -2.15
SIK3Q9Y2K2 AL512326.2-201ENST00000426359 151 ntBASIC1.59□□□□□ -2.15
SIK3Q9Y2K2 HMGN1P33-201ENST00000432945 451 ntBASIC1.59□□□□□ -2.15
SIK3Q9Y2K2 AC009474.2-201ENST00000451383 136 ntBASIC1.59□□□□□ -2.15
SIK3Q9Y2K2 RPS23P4-201ENST00000487908 423 ntBASIC1.59□□□□□ -2.15
SIK3Q9Y2K2 RNU11-2P-201ENST00000516898 142 ntBASIC1.59□□□□□ -2.15
SIK3Q9Y2K2 AC022523.2-201ENST00000561045 150 ntBASIC1.59□□□□□ -2.15
SIK3Q9Y2K2 AC007012.1-201ENST00000567192 175 ntBASIC1.59□□□□□ -2.15
SIK3Q9Y2K2 MIR4679-2-201ENST00000578358 77 ntBASIC1.59□□□□□ -2.15
SIK3Q9Y2K2 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.59□□□□□ -2.15
SIK3Q9Y2K2 Y_RNA.35-201ENST00000362601 101 ntBASIC1.58□□□□□ -2.16
SIK3Q9Y2K2 SNORD38B-201ENST00000384690 67 ntBASIC1.58□□□□□ -2.16
SIK3Q9Y2K2 RNU6-1104P-201ENST00000384723 104 ntBASIC1.58□□□□□ -2.16
SIK3Q9Y2K2 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.58□□□□□ -2.16
SIK3Q9Y2K2 AC108667.1-201ENST00000428618 249 ntBASIC1.58□□□□□ -2.16
SIK3Q9Y2K2 AC023790.1-201ENST00000482174 347 ntBASIC1.58□□□□□ -2.16
SIK3Q9Y2K2 RNU6-412P-201ENST00000516434 106 ntBASIC1.58□□□□□ -2.16
SIK3Q9Y2K2 RN7SKP88-201ENST00000516847 250 ntBASIC1.58□□□□□ -2.16
SIK3Q9Y2K2 7SK.8-201ENST00000612110 250 ntBASIC1.58□□□□□ -2.16
SIK3Q9Y2K2 7SK.11-201ENST00000615477 250 ntBASIC1.58□□□□□ -2.16
SIK3Q9Y2K2 7SK.13-201ENST00000622040 250 ntBASIC1.58□□□□□ -2.16
SIK3Q9Y2K2 SNORD38B-202ENST00000625943 69 ntBASIC1.58□□□□□ -2.16
SIK3Q9Y2K2 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
SIK3Q9Y2K2 Y_RNA.171-201ENST00000363760 102 ntBASIC1.57□□□□□ -2.16
SIK3Q9Y2K2 RNU6-396P-201ENST00000365369 105 ntBASIC1.57□□□□□ -2.16
SIK3Q9Y2K2 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.57□□□□□ -2.16
SIK3Q9Y2K2 AC063976.4-201ENST00000421971 163 ntBASIC1.57□□□□□ -2.16
SIK3Q9Y2K2 AL354695.1-201ENST00000427935 228 ntBASIC1.57□□□□□ -2.16
SIK3Q9Y2K2 AC245047.7-201ENST00000440265 293 ntBASIC1.57□□□□□ -2.16
SIK3Q9Y2K2 MIR4303-201ENST00000581299 66 ntBASIC1.57□□□□□ -2.16
SIK3Q9Y2K2 AP000942.3-201ENST00000603702 160 ntBASIC1.57□□□□□ -2.16
SIK3Q9Y2K2 Y_RNA.281-201ENST00000364774 94 ntBASIC1.56□□□□□ -2.16
SIK3Q9Y2K2 MIR548D2-201ENST00000384955 97 ntBASIC1.56□□□□□ -2.16
SIK3Q9Y2K2 RNY4P18-201ENST00000391107 89 ntBASIC1.56□□□□□ -2.16
SIK3Q9Y2K2 RNU4-69P-201ENST00000410677 143 ntBASIC1.56□□□□□ -2.16
SIK3Q9Y2K2 RNU6-602P-201ENST00000411155 105 ntBASIC1.56□□□□□ -2.16
SIK3Q9Y2K2 RNU6-1258P-201ENST00000516911 111 ntBASIC1.56□□□□□ -2.16
SIK3Q9Y2K2 AL645939.4-201ENST00000604495 135 ntBASIC1.56□□□□□ -2.16
SIK3Q9Y2K2 MIR8065-201ENST00000620577 100 ntBASIC1.56□□□□□ -2.16
SIK3Q9Y2K2 RNU1-42P-201ENST00000364033 160 ntBASIC1.55□□□□□ -2.16
SIK3Q9Y2K2 RNU6-60P-201ENST00000364792 103 ntBASIC1.55□□□□□ -2.16
SIK3Q9Y2K2 MT-TI-201ENST00000387365 69 ntBASIC1.55□□□□□ -2.16
SIK3Q9Y2K2 RNU6-1054P-201ENST00000411293 104 ntBASIC1.55□□□□□ -2.16
SIK3Q9Y2K2 AL603825.1-201ENST00000438481 80 ntBASIC1.55□□□□□ -2.16
SIK3Q9Y2K2 RNA5SP33-201ENST00000516687 98 ntBASIC1.55□□□□□ -2.16
SIK3Q9Y2K2 RNU6-165P-201ENST00000517170 99 ntBASIC1.55□□□□□ -2.16
SIK3Q9Y2K2 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
SIK3Q9Y2K2 MIR103A2-201ENST00000362154 78 ntBASIC1.54□□□□□ -2.16
SIK3Q9Y2K2 RNA5SP264-201ENST00000363115 107 ntBASIC1.54□□□□□ -2.16
SIK3Q9Y2K2 Y_RNA.362-201ENST00000365518 110 ntBASIC1.54□□□□□ -2.16
SIK3Q9Y2K2 SNORD12C-201ENST00000386307 89 ntBASIC1.54□□□□□ -2.16
SIK3Q9Y2K2 SNORA67.5-201ENST00000391036 107 ntBASIC1.54□□□□□ -2.16
SIK3Q9Y2K2 MIR2115-201ENST00000516657 100 ntBASIC1.54□□□□□ -2.16
SIK3Q9Y2K2 RNU7-6P-201ENST00000516845 62 ntBASIC1.54□□□□□ -2.16
SIK3Q9Y2K2 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.54□□□□□ -2.16
SIK3Q9Y2K2 SNORD53B-201ENST00000577887 78 ntBASIC1.54□□□□□ -2.16
SIK3Q9Y2K2 AL589743.1-201ENST00000551932 2712 ntBASIC1.53□□□□□ -2.16
SIK3Q9Y2K2 Y_RNA.49-201ENST00000362714 112 ntBASIC1.53□□□□□ -2.16
SIK3Q9Y2K2 RNU6-44P-201ENST00000384045 107 ntBASIC1.53□□□□□ -2.16
SIK3Q9Y2K2 Y_RNA.470-201ENST00000384307 117 ntBASIC1.53□□□□□ -2.16
SIK3Q9Y2K2 SNORD77B-201ENST00000391112 67 ntBASIC1.53□□□□□ -2.16
SIK3Q9Y2K2 RNU4-62P-201ENST00000410125 130 ntBASIC1.53□□□□□ -2.16
SIK3Q9Y2K2 AC090844.1-201ENST00000422019 156 ntBASIC1.53□□□□□ -2.16
SIK3Q9Y2K2 SNORA31.24-201ENST00000517232 57 ntBASIC1.53□□□□□ -2.16
SIK3Q9Y2K2 AP003716.2-201ENST00000528260 108 ntBASIC1.53□□□□□ -2.16
SIK3Q9Y2K2 Y_RNA.85-201ENST00000363014 111 ntBASIC1.52□□□□□ -2.17
SIK3Q9Y2K2 SNORD115-19-201ENST00000363098 82 ntBASIC1.52□□□□□ -2.17
SIK3Q9Y2K2 SNORA25.3-201ENST00000363205 127 ntBASIC1.52□□□□□ -2.17
SIK3Q9Y2K2 SNORD115-18-201ENST00000363293 82 ntBASIC1.52□□□□□ -2.17
SIK3Q9Y2K2 RNU6-755P-201ENST00000364400 103 ntBASIC1.52□□□□□ -2.17
SIK3Q9Y2K2 SNORD115-17-201ENST00000364612 82 ntBASIC1.52□□□□□ -2.17
SIK3Q9Y2K2 MT-TN-201ENST00000387400 73 ntBASIC1.52□□□□□ -2.17
SIK3Q9Y2K2 SNORA67.6-201ENST00000391093 99 ntBASIC1.52□□□□□ -2.17
SIK3Q9Y2K2 MIR1302-7-201ENST00000408841 72 ntBASIC1.52□□□□□ -2.17
SIK3Q9Y2K2 RPL39P34-201ENST00000477141 156 ntBASIC1.52□□□□□ -2.17
SIK3Q9Y2K2 MIR548AE2-201ENST00000583456 67 ntBASIC1.52□□□□□ -2.17
SIK3Q9Y2K2 AP000753.3-201ENST00000604083 169 ntBASIC1.52□□□□□ -2.17
SIK3Q9Y2K2 PRELID3BP2-201ENST00000605362 201 ntBASIC1.52□□□□□ -2.17
SIK3Q9Y2K2 MIR7974-201ENST00000615835 79 ntBASIC1.52□□□□□ -2.17
SIK3Q9Y2K2 snoU13.25-201ENST00000458945 104 ntBASIC1.51□□□□□ -2.17
SIK3Q9Y2K2 AC068338.1-201ENST00000565567 176 ntBASIC1.51□□□□□ -2.17
SIK3Q9Y2K2 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.51□□□□□ -2.17
SIK3Q9Y2K2 AL035470.1-201ENST00000622571 220 ntBASIC1.51□□□□□ -2.17
SIK3Q9Y2K2 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SIK3Q9Y2K2 Y_RNA.344-201ENST00000365381 112 ntBASIC1.5□□□□□ -2.17
SIK3Q9Y2K2 SNORD26-201ENST00000384147 75 ntBASIC1.5□□□□□ -2.17
SIK3Q9Y2K2 Y_RNA.549-201ENST00000384657 102 ntBASIC1.5□□□□□ -2.17
SIK3Q9Y2K2 BTF3P4-201ENST00000418852 495 ntBASIC1.5□□□□□ -2.17
SIK3Q9Y2K2 MIR4264-201ENST00000583520 66 ntBASIC1.5□□□□□ -2.17
SIK3Q9Y2K2 AC087741.2-201ENST00000619415 172 ntBASIC1.5□□□□□ -2.17
SIK3Q9Y2K2 MIR378A-201ENST00000362177 66 ntBASIC1.49□□□□□ -2.17
SIK3Q9Y2K2 SNORA63.5-201ENST00000363548 123 ntBASIC1.49□□□□□ -2.17
SIK3Q9Y2K2 RNU6-1107P-201ENST00000364817 104 ntBASIC1.49□□□□□ -2.17
SIK3Q9Y2K2 Y_RNA.309-201ENST00000365046 111 ntBASIC1.49□□□□□ -2.17
SIK3Q9Y2K2 SNORA22-201ENST00000383907 134 ntBASIC1.49□□□□□ -2.17
SIK3Q9Y2K2 SNORA18-201ENST00000384416 132 ntBASIC1.49□□□□□ -2.17
SIK3Q9Y2K2 PDCD5P2-201ENST00000507570 312 ntBASIC1.49□□□□□ -2.17
SIK3Q9Y2K2 AL161722.3-201ENST00000605789 2983 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 244.8 ms