Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.36□□□□□ -2.19
NOTCH3Q9UM47 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.36□□□□□ -2.19
NOTCH3Q9UM47 SNORD114-22-201ENST00000365423 72 ntBASIC1.36□□□□□ -2.19
NOTCH3Q9UM47 AC004965.1-201ENST00000413033 213 ntBASIC1.36□□□□□ -2.19
NOTCH3Q9UM47 AC104435.1-201ENST00000483483 166 ntBASIC1.36□□□□□ -2.19
NOTCH3Q9UM47 RNU6-250P-201ENST00000516958 103 ntBASIC1.36□□□□□ -2.19
NOTCH3Q9UM47 SNORA31.26-201ENST00000517250 137 ntBASIC1.36□□□□□ -2.19
NOTCH3Q9UM47 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.36□□□□□ -2.19
NOTCH3Q9UM47 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.36□□□□□ -2.19
NOTCH3Q9UM47 MIR376B-201ENST00000614515 100 ntBASIC1.36□□□□□ -2.19
NOTCH3Q9UM47 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.36□□□□□ -2.19
NOTCH3Q9UM47 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
NOTCH3Q9UM47 VTRNA1-1-201ENST00000363120 99 ntBASIC1.35□□□□□ -2.19
NOTCH3Q9UM47 SNORA1.2-201ENST00000365189 134 ntBASIC1.35□□□□□ -2.19
NOTCH3Q9UM47 MIR515-2-201ENST00000384883 83 ntBASIC1.35□□□□□ -2.19
NOTCH3Q9UM47 MIR515-1-201ENST00000384884 83 ntBASIC1.35□□□□□ -2.19
NOTCH3Q9UM47 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
NOTCH3Q9UM47 RNU6-602P-201ENST00000411155 105 ntBASIC1.35□□□□□ -2.19
NOTCH3Q9UM47 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.35□□□□□ -2.19
NOTCH3Q9UM47 MIR4723-201ENST00000585070 81 ntBASIC1.35□□□□□ -2.19
NOTCH3Q9UM47 AL355297.2-201ENST00000604792 129 ntBASIC1.35□□□□□ -2.19
NOTCH3Q9UM47 MIR4791-201ENST00000607666 84 ntBASIC1.35□□□□□ -2.19
NOTCH3Q9UM47 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
NOTCH3Q9UM47 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
NOTCH3Q9UM47 RNA5SP323-201ENST00000391094 133 ntBASIC1.35□□□□□ -2.19
NOTCH3Q9UM47 RNU2-7P-201ENST00000410794 178 ntBASIC1.35□□□□□ -2.19
NOTCH3Q9UM47 AC006483.1-201ENST00000487308 313 ntBASIC1.35□□□□□ -2.19
NOTCH3Q9UM47 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.35□□□□□ -2.19
NOTCH3Q9UM47 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.35□□□□□ -2.19
NOTCH3Q9UM47 AC145423.2-201ENST00000610631 239 ntBASIC1.35□□□□□ -2.19
NOTCH3Q9UM47 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.35□□□□□ -2.19
NOTCH3Q9UM47 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
NOTCH3Q9UM47 RNA5SP139-201ENST00000364340 117 ntBASIC1.34□□□□□ -2.19
NOTCH3Q9UM47 Y_RNA.241-201ENST00000364470 117 ntBASIC1.34□□□□□ -2.19
NOTCH3Q9UM47 Y_RNA.247-201ENST00000364500 92 ntBASIC1.34□□□□□ -2.19
NOTCH3Q9UM47 MIR1267-201ENST00000408723 78 ntBASIC1.34□□□□□ -2.19
NOTCH3Q9UM47 RNU6-1077P-201ENST00000410506 102 ntBASIC1.34□□□□□ -2.19
NOTCH3Q9UM47 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.34□□□□□ -2.19
NOTCH3Q9UM47 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.34□□□□□ -2.19
NOTCH3Q9UM47 MIR548BB-201ENST00000626714 66 ntBASIC1.34□□□□□ -2.19
NOTCH3Q9UM47 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.34□□□□□ -2.19
NOTCH3Q9UM47 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.34□□□□□ -2.19
NOTCH3Q9UM47 SNORD38.1-201ENST00000363863 68 ntBASIC1.34□□□□□ -2.2
NOTCH3Q9UM47 Y_RNA.565-201ENST00000384719 101 ntBASIC1.34□□□□□ -2.2
NOTCH3Q9UM47 Y_RNA.609-201ENST00000410669 89 ntBASIC1.34□□□□□ -2.2
NOTCH3Q9UM47 AC009474.2-201ENST00000451383 136 ntBASIC1.34□□□□□ -2.2
NOTCH3Q9UM47 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.34□□□□□ -2.2
NOTCH3Q9UM47 SNORA31.11-201ENST00000516528 139 ntBASIC1.34□□□□□ -2.2
NOTCH3Q9UM47 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.34□□□□□ -2.2
NOTCH3Q9UM47 MIR548AE2-201ENST00000583456 67 ntBASIC1.34□□□□□ -2.2
NOTCH3Q9UM47 MIR548Z-201ENST00000584743 97 ntBASIC1.34□□□□□ -2.2
NOTCH3Q9UM47 RNU6-833P-201ENST00000363486 107 ntBASIC1.33□□□□□ -2.2
NOTCH3Q9UM47 MIR561-201ENST00000385216 97 ntBASIC1.33□□□□□ -2.2
NOTCH3Q9UM47 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
NOTCH3Q9UM47 RNU1-101P-201ENST00000391171 127 ntBASIC1.33□□□□□ -2.2
NOTCH3Q9UM47 MIR1323-201ENST00000408090 73 ntBASIC1.33□□□□□ -2.2
NOTCH3Q9UM47 RNU2-63P-201ENST00000410792 194 ntBASIC1.33□□□□□ -2.2
NOTCH3Q9UM47 RNU7-67P-201ENST00000459003 62 ntBASIC1.33□□□□□ -2.2
NOTCH3Q9UM47 RNU7-45P-201ENST00000459460 63 ntBASIC1.33□□□□□ -2.2
NOTCH3Q9UM47 MIR338-201ENST00000636369 67 ntBASIC1.33□□□□□ -2.2
NOTCH3Q9UM47 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
NOTCH3Q9UM47 RNA5SP493-201ENST00000364115 91 ntBASIC1.33□□□□□ -2.2
NOTCH3Q9UM47 RNU6-1019P-201ENST00000364424 107 ntBASIC1.33□□□□□ -2.2
NOTCH3Q9UM47 AP000567.1-201ENST00000406413 156 ntBASIC1.33□□□□□ -2.2
NOTCH3Q9UM47 RNU6-917P-201ENST00000516294 104 ntBASIC1.33□□□□□ -2.2
NOTCH3Q9UM47 AL512598.1-201ENST00000610158 273 ntBASIC1.33□□□□□ -2.2
NOTCH3Q9UM47 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.33□□□□□ -2.2
NOTCH3Q9UM47 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
NOTCH3Q9UM47 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
NOTCH3Q9UM47 RNA5SP62-201ENST00000363457 110 ntBASIC1.32□□□□□ -2.2
NOTCH3Q9UM47 U8.5-201ENST00000364528 136 ntBASIC1.32□□□□□ -2.2
NOTCH3Q9UM47 RNU6-35P-201ENST00000384530 107 ntBASIC1.32□□□□□ -2.2
NOTCH3Q9UM47 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.32□□□□□ -2.2
NOTCH3Q9UM47 AC004223.1-201ENST00000479840 271 ntBASIC1.32□□□□□ -2.2
NOTCH3Q9UM47 AC023141.11-201ENST00000508864 202 ntBASIC1.32□□□□□ -2.2
NOTCH3Q9UM47 RNU7-2P-201ENST00000516096 62 ntBASIC1.32□□□□□ -2.2
NOTCH3Q9UM47 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.32□□□□□ -2.2
NOTCH3Q9UM47 SNORD67.1-201ENST00000516618 108 ntBASIC1.32□□□□□ -2.2
NOTCH3Q9UM47 RNU6-958P-201ENST00000516995 106 ntBASIC1.32□□□□□ -2.2
NOTCH3Q9UM47 RNU7-35P-201ENST00000517174 62 ntBASIC1.32□□□□□ -2.2
NOTCH3Q9UM47 AC036111.3-201ENST00000526389 112 ntBASIC1.32□□□□□ -2.2
NOTCH3Q9UM47 SNORD53B-201ENST00000577887 78 ntBASIC1.32□□□□□ -2.2
NOTCH3Q9UM47 MIR4712-201ENST00000583750 82 ntBASIC1.32□□□□□ -2.2
NOTCH3Q9UM47 RNU6-86P-201ENST00000606534 107 ntBASIC1.32□□□□□ -2.2
NOTCH3Q9UM47 AC103810.8-201ENST00000607347 118 ntBASIC1.32□□□□□ -2.2
NOTCH3Q9UM47 AC103810.7-201ENST00000607821 91 ntBASIC1.32□□□□□ -2.2
NOTCH3Q9UM47 Y_RNA.430-201ENST00000384081 110 ntBASIC1.32□□□□□ -2.2
NOTCH3Q9UM47 RNU6-163P-201ENST00000384396 106 ntBASIC1.32□□□□□ -2.2
NOTCH3Q9UM47 RNA5SP261-201ENST00000410536 106 ntBASIC1.32□□□□□ -2.2
NOTCH3Q9UM47 SNORA7.5-201ENST00000410672 110 ntBASIC1.32□□□□□ -2.2
NOTCH3Q9UM47 HMGN2P19-201ENST00000425149 265 ntBASIC1.32□□□□□ -2.2
NOTCH3Q9UM47 RNU7-73P-201ENST00000458743 63 ntBASIC1.32□□□□□ -2.2
NOTCH3Q9UM47 SNORA25.15-201ENST00000516487 89 ntBASIC1.32□□□□□ -2.2
NOTCH3Q9UM47 RNU6-90P-201ENST00000606352 106 ntBASIC1.32□□□□□ -2.2
NOTCH3Q9UM47 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
NOTCH3Q9UM47 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.31□□□□□ -2.2
NOTCH3Q9UM47 RNU1-23P-201ENST00000363361 144 ntBASIC1.31□□□□□ -2.2
NOTCH3Q9UM47 RNU6-616P-201ENST00000384353 107 ntBASIC1.31□□□□□ -2.2
NOTCH3Q9UM47 SNORD38.2-201ENST00000384470 69 ntBASIC1.31□□□□□ -2.2
NOTCH3Q9UM47 RNU6-539P-201ENST00000516665 103 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 253.3 ms